Cololabis saira (Pacific saury): 133458284
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Entry
133458284 CDS
T09849
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133458284
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133458284
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
133458284
NCBI-ProteinID:
XP_061594003
LinkDB
All DBs
Position
2:complement(12759671..12859523)
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AA seq
2015 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSTPLDQEIHFDDVCHKTAKPKAPITDVTVVIRSIGEEVP
PGYTCIEATPTGHSADLNNGGLMVPQIFLCYRRGRDKPPLTDLGVLFEWKERLKQGCHLV
QTTPSGRPANISGNSSQRIYITYRRASECQPHAALALTDICIIIPSKGESPPHTFCKVDR
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ESWPANTKYSLPVFSIFVLTGASGEKVYGAAIQFYEPYPEECLTDQQRSQLGLLSPDRPK
SSPGAADGSKSSAAEPRSVHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHALPIEKH
ISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQNLGPENAVTL
LVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIV
GVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNVLSNLHQQLV
DGQCRPDGLVELSMSDSPELSSGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPITQAPS
EKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCV
EKLYNSDRNAEKGGKVDGDRQEETRLIEIDESQRSEHTVFITPPELPPLPEGEEHPLCYR
YDGFPVLSLDLFDPMEGLRTPRSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKKYSSIP
QLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVCYRVLM
QLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKLRNV
IVATAQFKQALRRHAPFTQSPLSDGSDLDAESHGSLDSSADTNPAEQGPYTSDSVKVEPT
DDRSSTVGRGGGGVGARPGGAHSHWGGSELREAALHPGDQSDLGYNSLSKEEVRRGEPAP
QDSAPDKDDKKESDSSSLSETDSTKGSKDFLPQLDLEISSSFRPRGIVRSSYPYDDSSCK
PKSSASAGHVAGLLFTTSLDEIAEVHNNSLLRRHRSALEEVVGSSGSGSALDWQGGRRRR
LSGDTVCSSGSGHTVLGLAMSQAETDPEKIAGHLGADAKILSCASHSESERFHTVPLGGL
EGLAAKTNTRRSEHRDVEEEVEELDSSDEERNNPDAIFDLEDLDSDKPATGAKLHKQRVK
ASASYGAAAAAASKGAIKRTGIETGFDPLSLLAAETKSEQRDADQYPDGDEASTPSARRN
LAREIELYMNQMDSPLSSRTPSMDLQDPTSPLLLHPPSIPALRRSSLPHASPVRTGGMPR
SRTFHQASSSQPISRQRLWSSPSCQSSSPSPRPSPLREKADGISLASPSPSSSAFALDTL
LTPTLDVFKTSVFSAGKGVAEKASRWYSRLATYTTPTKDSNGDRLSVCSLDVGDPDCSSL
LDEEGGGESRYSLVSPQNNGPSRPRRSPRRSPLHSRLQSPTAGCSLGRPTSLLPGCVVSP
PAFQLPDKSELSSSRYTSNTSIFNNYAMELLISSCSRCKTCDCLVYDEEIMAGWTADDSN
LNTTCPFCGNPFLPFLNVEIRDMRGPGRLYLKGSPSLDEAMTSSCSASTGLNTGTSTVST
PCPTTAVSPPSPTAAGQDCSGRNRLAKAQGINIPTDRRHGQLSSGPMTRSISAFGPLEET
APFSRFLPTSGSLPTRLNEATDPLNMDWQLHNPEPVTVPYLSPLVLWKELESLLENEGDP
VITEADMVDHHPIIYWNLVWYFRRLDLPSNLPGLILTSEHCNRDSQIPRHWMSEDSKHVL
IQILWDNLKLHQDPIQPLYILWNTYRLNCTLLLENVGYPLSRPVPEEEKPFSEELLQSVV
KSIQRNDVSRPMAQLLQLLGRTVGVKRQRSLYRDILFLSLVALGKDNIDVDAFDREYKLA
YDRLAPTLVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgactactttgtggtggctggtctaacagac
ccatccacacctttggaccaggagatccactttgatgatgtctgtcacaagacggccaag
ccgaaagcccccatcaccgatgtgacggtggtgatccgctccatcggcgaggaggttcct
ccggggtacacctgcatagaggccacgcccaccggccattcagccgaccttaacaacggt
ggcctcatggtgccgcagatcttcctgtgctacaggcgaggccgcgacaagccgccactc
acagacttgggtgtgctgtttgagtggaaggagcggctgaagcagggctgccacctcgtc
cagaccacgccctccggtcgtccagccaacatcagcggaaactcctcccagcgcatctac
atcacctaccgccgcgcatccgagtgccagccacacgccgctctggccctcaccgacatc
tgcatcattatccccagcaagggggagtcgcccccgcacactttctgcaaggtggatagg
aatctgaacagcagcatgtggggctcctcggtctacctgtgttacaagaagtctgtggcc
aaaaccaacacaatcgcgtataaagcaggtttattcagcagatatccagaggaggactac
gagtctttccccctgccagagtcggtccctctcttctgccttcccatgggggccacgatc
gagtcgtggcctgcaaacaccaaatactccctgcccgtcttttccatctttgtcctaacc
ggagcctctggagagaaggtgtatggtgccgccatccagttctacgagccctacccagag
gaatgcctgaccgatcagcagcgctcccagctgggcctcctgagcccggaccgacccaaa
tcctcccccggtgccgccgacggcagcaagagcagcgccgccgagccccgctcagtccac
accaacaagtgcatctgcctgctctcccactggcccttctttgatgctttccggaagttc
ctaacattcctctaccgctactccatctcaggcccacacgctcttcccatcgagaagcac
atctctcacttcatgcacaaagttcccttcccatcctcccagaggcctcgcatcttggtg
cagctttccccacatgacagcctgatgttgagccagcccgtgtcctctcctttacccctc
agtggcggtcgattttccacgctgctccagaacctcggaccagagaatgccgtcaccttg
ctggtgtttgccgtgactgaacataagatcctcgtccactcgttacggccggcggttctg
accagcgtcactgaggctttggtgtctatgatcttcccgttccactggccgtgtccgtat
atcccgctgtgccccctggcgttggctgacgtgttgagcgccccctgtccgttcattgta
ggcgtggactcgcgctactttgatctgtacgaccccccgcctgacgtgagctgcgtggac
ctggacacaaacaccatcttccataatgaagataagcgagctctcacatggaagatcctg
ccaaagaaagcctgtaaaaacctgatgaatgtgctgagcaatctccaccagcagctcgtc
gatggtcagtgccggcctgatggcttggtggagctgagcatgagtgactctccggagctg
agctctgggaagagtctccacacgctggagctggagatccaggaagcattcctgcgcttc
atggcggcgattttgaagggctaccgctccttcctgcggcccatcacccaagcaccgtca
gagaaagccacagacgcaagctcactctttgacttgcaagggttcttgaagagccgtgat
cgctcacaccagaagttctactctctgatgaccaagacccagatgttcatccgcttcatc
gaggagtgctcttttgtcagcgacaaagatgccagccttgccttctttgacgactgtgtg
gaaaaactttacaattcagatcggaatgcggaaaaaggagggaaggtggacggcgacagg
caggaggagaccaggctgatagagattgatgaatcccagcgcagtgagcacacagtcttc
atcacacctccagagctgccccctctgccagagggagaggagcacccgctgtgttacagg
tacgatggtttcccagtgttgagtctggacttgtttgaccccatggagggcctgcggacg
ccccgctcccgcctcgctgccaggcacagctgtcccaccagccccgcccccatgttcaga
cgcaccaagcaggagatcaaatcagcccagaagatagccaagaagtactcgtccatcccc
cagctgtggtccaagtgcctgctccggcactgctacggcctgtggttcatctgtctgcca
gcttacgtgaaggtctgtcactccaaggtccgggcgcttcgcaccgcctacgacgtgctc
aggaagatgcaggcaaagaagctgcaacctcctgatgaggtctgctaccgggtgctgatg
cagctgtgtgggcagtacggacagcccgtccttgctgtcagggtcctctttgagatgaag
aaggcgggggttcaccccaatgccatcacctacggctactacaacaaggcggtgttggag
agcacgtggccctccagcaccagaggaggatacttcctgtggatgaagctcagaaatgtc
attgtggccacggcgcagttcaaacaggccctacgccgacatgcacccttcacccagagc
cccctgtcagatggcagtgacctggacgccgagagtcacggcagcctggatagttctgcc
gacactaacccggccgagcagggcccctacacctctgactccgtcaaagtagaacccact
gacgatagatctagcacagtcggccgtgggggtggcggcgtgggcgccaggcccgggggg
gcccactcacactgggggggctctgagctcagagaagccgctctccacccaggagaccag
tcagacctgggttataactccctgtccaaggaggaggttcggagaggagagcccgcaccc
caggactccgccccggacaaagatgacaagaaagagagcgacagcagctccttgtcagaa
acagatagtaccaagggaagtaaggacttcctccctcagctggacctggagatcagttcc
tccttcagaccacgagggattgttcgcagcagttatccgtacgatgattcctcctgcaaa
cccaagagctcagccagtgcaggccacgtcgcaggtctcctcttcaccacctcactggat
gagatcgctgaggttcacaacaacagtttgctcaggagacacaggagtgctctggaggag
gtggtgggcagctcgggcagcggctccgctctggactggcagggcgggcggcggcggcgc
ctgagcggagacaccgtgtgcagcagcggcagcggtcacaccgtcctcggcctcgccatg
agccaggcggaaacagacccggagaagatcgctgggcatttaggtgcagacgccaaaatc
ctctcctgtgccagtcacagcgagagtgaaaggtttcatactgtgcctctcggtgggtta
gagggattagctgctaagacgaacacgcgcaggagtgaacacagggacgtggaagaggaa
gtggaggagctggactccagtgatgaggagaggaataatcccgacgcaatctttgacttg
gaggatctggattcagacaaacccgccactggagccaaacttcataagcaacgtgttaaa
gccagcgccagctacggagcagcggccgccgcggcgtccaaaggcgcaatcaagcgcaca
ggcatcgaaacgggcttcgacccgctttctctcctggcagcagagacaaagtctgagcaa
cgagatgctgatcagtatccagatggggacgaggccagtacgcccagcgctcgaaggaac
ctggccagggagatcgagctgtacatgaaccagatggacagcccgctgagcagccgcacg
cccagcatggacctgcaggacccgaccagccctctgctgctgcacccgccctccatcccc
gccctgcgcagatccagcctgcctcacgcctcccccgtcaggacaggagggatgccgcgc
tcccgcacctttcaccaggcctcctcctcccagcccatctcgcggcagcgcctgtggtcg
tcaccgtcctgccagagctccagtcccagcccccggcccagcccgctcagggagaaggct
gacggcatcagtctggcgtcgccgtcaccgtcctcgtccgcttttgctctggacaccctg
ctcacgccaacgctggacgtgttcaagaccagtgtcttctccgctgggaagggcgtggcg
gagaaagccagccgctggtattctcgtctcgccacctacacaacacccaccaaggacagt
aacggggaccgtctgagcgtttgctccctcgatgtcggagatccagactgctcctccctg
ctggatgaagaaggcggaggggagtcgaggtattcgttggtgtctccacagaacaacggc
ccctcacggccccgcaggagccccagacgcagccccctccacagccggctgcagagcccc
acggccggctgcagcctcgggagacccacgtccctgctgcccggatgcgtcgtctctcca
cccgccttccagctaccagacaagtcagagctgagctcttcacgctacacaagcaacacc
agcatcttcaacaactacgccatggagctgctgatctccagctgctctcgctgtaagacg
tgcgactgcctggtgtacgacgaggagatcatggccggctggacggcagacgactccaac
ctgaacaccacctgtcccttctgtggaaaccccttcctgcccttcctcaacgtggagatc
agggacatgcggggacccggcaggctgtacttgaagggcagcccgtccctggacgaggcc
atgacgtcatcctgctctgcttccacaggcctgaacacggggacgtccaccgtgtccacg
ccctgtcccaccacagccgtgtcccctccctcccccaccgccgctgggcaggactgctct
ggaaggaaccggctggccaaggctcaagggatcaacatccccacagatcgccgccacggg
cagctgtcctccgggcccatgacccgcagcatcagcgccttcggccctctggaggaaacg
gctccattcagccgcttcctgccaacgtcgggcagcctgcccactcgcctcaatgaagct
acggaccccctgaatatggactggcagctccacaaccccgagccggtgacggttccctat
ctgagcccactggtgctgtggaaggagctggagagtctgctggagaacgagggcgacccg
gtgatcacggaggccgacatggtggaccatcatcccatcatctactggaatctggtgtgg
tacttcagacggctggacctgcccagcaacctgcccggcctcatcctcacctcggagcac
tgcaacagagactcccagatccctcgtcactggatgtcagaggacagtaaacatgtcctg
atccagatcctgtgggacaacctgaagctgcaccaggaccccatccagcctctctacatc
ctctggaacacatacaggcttaattgtactctgttgttagagaatgtgggctaccctctg
tcccggccggtcccggaggaggagaagccgttcagcgaggagctgctgcagagcgtggtg
aagagcatccagaggaacgacgtgagccggcccatggctcagctgctgcagctgctggga
cggaccgtcggggtcaagcggcaaaggagtttgtaccgggacatcctcttcctctccctg
gtggcgctgggaaaagataacatcgatgttgacgccttcgatcgggagtacaagctggcg
tacgaccgcctggcgcccaccctggtgaagctgacccacaactgtgaccggcctcccagc
acgggcgtcatggagtgtcgcaggacgttcggagagccgtacctgtga
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