Cololabis saira (Pacific saury): 133458332
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Entry
133458332 CDS
T09849
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csai03016
]
133458332 (trmt13)
Enzymes [BR:
csai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
133458332 (trmt13)
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
133458332 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
133458332
NCBI-ProteinID:
XP_061594105
LinkDB
All DBs
Position
13:complement(18737881..18757878)
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AA seq
499 aa
AA seq
DB search
MAAPQQTCSFFVQKKKRFCKMVVGKGKRFCGEHATMEEEGGSSRRIVCPLDPKHTVFQDK
LEKHLKKCNSREKPKPVYYVENINAGPAEGDHTIPQVSLSDRSRTELESLLDKLKKVVEG
LQCDVKDGILSHPVVLDELTNPKNGDSAHKHLRQQSSILGHLEELGLLRRGQCFVEFGAG
RGKLSHWIHEALKTREEPKSGEKPEGSKEPRTQEELKTCKQPETLKELETCEEAKTPEKP
EPNEELQMLLVERSSTRFKVDGKHQDAGVPFERLQVDIQHLDLSKVPLLLQRKLPLVGVG
KHLCGAATDLALRCMLGTPGVGAETEPPPKRLKPSEEPRVGPESGLPGLETGGGPDAVLG
LAVALCCHHRCEWRHYVGQQFFLQRGLGAAEFSAFCRMSSWATCGLRLANQESPSQEPAN
QRGDDDEHEPAEERDTVSGFLSAAERERIGRLCKLLIDAGRCHFLQTRGFTSKLTRYVSS
HVTLENILLTAVPRPSPSS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccccagcagacctgcagcttcttcgtgcagaagaagaagcgtttctgtaag
atggtcgtggggaaagggaagcgtttctgcggagaacatgccaccatggaggaggagggg
ggcagcagcaggaggatcgtctgtcctctggaccctaaacacaccgtttttcaagacaaa
ctggagaaacacctgaagaaatgcaactccagagagaaacccaaacctgtttattatgtg
gagaacatcaacgcaggaccagctgaaggagatcataccattccacaggtgagtctgtct
gatcggagcaggacggagttggagtctctgttggacaaactgaagaaggtcgtagaagga
ctgcagtgtgacgtgaaggacggcatcctgtctcatcctgtcgtgctggatgaacttacc
aacccgaagaacggagactccgcccacaaacacctgaggcagcagtcttccatcctaggt
cacctggaggagctggggctgctacggagggggcagtgcttcgtggagtttggcgcaggc
cgagggaagctgtctcactggatccacgaggccttaaaaaccagagaggaaccaaagagc
ggtgagaagcccgagggcagcaaggaaccaaggacccaggaggaactgaagacatgcaag
cagccagagactctcaaggagttggagacttgtgaagaggctaagactcccgagaagcca
gagcccaatgaggagctgcaaatgttgctggtggagcgctccagcactcgcttcaaggtg
gatgggaaacaccaggatgccggagttccatttgagaggctgcaggtggacattcagcac
ctggatctgagcaaagttcctctgctgctacagaggaagctccctctggtcggcgttggg
aagcacctgtgtggagcagcaacagatctggctctgcgctgcatgttgggaacacctgga
gtcggagcagagactgagcctcctccgaaacgcctcaaaccatcagaagaaccgagggta
ggcccggagtcgggtctaccaggcctagaaactggtgggggtcctgatgctgtgctgggc
ctggcggtggcgctgtgctgtcatcatcgctgtgagtggcgtcactatgttggccagcag
ttcttcctgcagagaggactcggagcggcagagttctctgccttctgccggatgtccagc
tgggccacatgtggactcagactagccaatcaggagagtccgtcacaggagccagccaat
caaagaggggacgatgacgagcacgaaccagctgaggagagagacactgttagcgggttt
ctgtcggcggcggagcgcgagcgcatcggccgtctctgtaaactcctgatcgacgccggc
agatgtcacttcctgcaaaccagagggttcaccagcaaactgactcgatatgtgagcagt
catgtgaccctggagaacattttactgactgccgtgccccgcccctccccctcttcctga
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