Cololabis saira (Pacific saury): 133458351
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Entry
133458351 CDS
T09849
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03320
PPAR signaling pathway
csai04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
133458351 (rxrgb)
03320 PPAR signaling pathway
133458351 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133458351 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
csai03310
]
133458351 (rxrgb)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
133458351 (rxrgb)
Nuclear receptors [BR:
csai03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
133458351 (rxrgb)
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
133458351
NCBI-ProteinID:
XP_061594131
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All DBs
Position
13:19179332..19212691
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AA seq
500 aa
AA seq
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MWHPVTSPTTGGSPGRDTGYGHYSTGPMNAAHSHPPMGMVGHPSVISTSRPLPSPMSALG
SPMNGLASPYPVITSSLGSPSVSLQSTPNMNFGPLSSPQMNSMNSVSSSEDIKPPPGLQN
LGNINYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKE
CLIDKRQRNRCQYCRYQKCLAMGMKREESERNMEKQHSAFMLHRSGTNFQKTAGTLKPSV
PLNQAVQEERQRGKERGENEVESTSSFNDEMPVEKILDAELAVEPKTETYSDGSPGNSTN
DPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSVTVKD
GILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKG
LSNPSEVEGLREKVYASLEAYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLI
GDTPIDTFLMEMLEAPHQIT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccccgtgacatcacctacaactggaggcagccctgggagggacactggctat
ggtcactattctacggggccaatgaatgcagcccacagccatcctcctatgggcatggtg
ggccacccgtccgtcatcagcacctccaggccattaccgtcccccatgtccgccttgggc
tcgccgatgaatggcctggcatcgccctatccagtcatcacgtcatctctcgggtcgcct
tcagtatctctgcagtctacgcccaacatgaactttggaccgctcagtagtccacagatg
aactctatgaacagcgtaagcagctccgaggacatcaagcctccgccgggcctacagaat
ctaggaaacatcaactaccaatgtacgagccccggggggatgtcaaaacacatctgcgca
atttgtggggatcgctcctcaggaaaacactatggtgtgtacagctgcgaaggttgcaaa
ggcttcttcaagaggactgttcgcaaagatctcacctacacatgtcgagacaacaaggag
tgcctgattgacaagcgtcagcgaaaccgctgccagtactgtcgctaccagaagtgcctg
gccatgggcatgaagagagaagaatcagaacgaaacatggagaagcagcattcagctttt
atgcttcacagatctggaacaaacttccagaaaactgcaggaacgctgaaaccctcagtt
cctttaaatcaagctgtgcaggaagagaggcagcgaggtaaggagcgtggggagaatgaa
gtcgagtcaaccagcagtttcaatgatgaaatgcccgtggagaagatcctggatgctgag
ttggccgtcgagcccaaaacagagacgtacagcgacggcagtcctgggaactctaccaac
gaccccgtcaccaatatctgccaagcagcagacaagcagctcttcaccttggtggagtgg
gccaaaaggatcccgcacttctccgaactccccctcgatgaccaggtcatcctactacgg
gcaggctggaacgagctgctcatcgcttctttctcacatcgctcagtcacggttaaggac
ggcattcttctggcaacagggcttcacgttcacagaagcagcgcccacagtgccggagtg
gggtccatctttgacagagttctgacagagttggtttctaaaatgaaagacatgcagatg
gataagacagaactcggctgcctgcgagctatcgtcctcttcaacccagatgcaaaaggt
ttgtcaaacccatcagaggtggaggggcttagagaaaaagtttacgcctcattggaagcg
tatacaaaacagaagtacccagaccagcctggcagatttgccaaactgctgctccgcctg
ccggccctgcgctccatcggcctcaagtgcctggagcacctgttcttcttcaagttaatt
ggggacacgcccatcgacaccttcctgatggagatgctggaggctccccatcagatcaca
tga
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