Cololabis saira (Pacific saury): 133458390
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Entry
133458390 CDS
T09849
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133458390 (samd4a)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
133458390 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
133458390
NCBI-ProteinID:
XP_061594203
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All DBs
Position
2:complement(12950381..13007799)
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AA seq
727 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEA
EANNPGIISQWQVEPKERVISLVLTHLPLLKPGNTEAKGEYMRLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLEDRAALALWLNHLEERAAARGDSLERPPPAGPHHHHHHHHHHH
QSTPPSTLTSSGSSSSTNTSSTGNLYTLHHQQRYGSDDRLNGWQSSRDSGVVGGWQQGCE
NGHLPLYPSSSVPATINTVGTSGGSSIILTSGGGSQQHSPLKRSVSLTPPMSGPSNQPLG
HVWLSQEDLRTARGPAPDHAPLSPQSSIASSGSGGSEHLEDAGLGGGSGLHRSSFHEEGS
GMRDVPAWLKSLRLHKYAALFSTMTYDEMMSLTEELLEAQQKVTKGARHKIVISIQKLKE
RQHLLRSLEKDVLEGSNLRAPLQELHQMIMTPIKAFSGGEESSLQRPLLSPESKSAAPGS
HLTGGGGGEAESGSSVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLIH
ESFTETQKKRLLSWKQQVQRLFRSIPRKTLLDIAGYRPQRSRFGQSNSLPTTGCVGGSVS
SRRNLHQFHMPSRSLPGARLGLLGSGGLLGPTPRSSSSTPTGPKQGRHGPWFANPGGSNS
MPSRTHSSVQRTRSLPVHTTPQTMVMFQQADLQLPVTEPDINNRLESLCLSMTEHALGDG
SDRTSTI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgatcaggtgggcgtgctagccagctggttcaaggggtggaacgagtgc
gagcagacggtggccctgctctccctgctgaagagggtgagccggacccaggcccgcttc
ctgcagctgtgtctggagcactccctggccgagtgcaccgagctgcaggtcctggaagca
gaggccaacaatccaggtataatcagccagtggcaagttgagcctaaggagcgcgtcatc
tcgctggtcctcacacatctcccactgctcaagcccggcaacactgaagctaagggggag
tacatgcgtctgctgccgcgtatcctggcccacaccatcgagcatggccaccacctggag
gagtctcgccagctcttgtcctacgcccttatccaccctgccacctccctggaagaccgc
gccgcgctggcactgtggctcaaccaccttgaggagagagctgccgcacggggagactcc
ctggaaagacctcctcccgctggaccacaccatcaccaccaccaccaccaccaccatcac
cagtccacgcctccgtctactctcacctcttcagggtcctcctcttccacaaacacctct
tcaacaggcaacctgtacaccctccatcaccagcagcgctacggctccgacgatcgcctc
aacggctggcagagctctcgggattcaggagtggtcggtggctggcagcagggctgtgaa
aacggacacctccctctctacccgtcatcctctgtaccagcaaccattaacacagtggga
accagcggggggagcagcattatcctgaccagtggagggggcagtcagcagcacagtccc
ctaaagcgctccgtgtccctcacaccccccatgagcggccccagcaaccagcccctgggc
cacgtgtggctgtcccaggaggacctccggaccgccaggggcccggccccggaccacgcg
ccgctctcgccccagagcagcatcgcctcttcagggagtggaggcagcgagcacctggag
gatgcaggtttaggaggaggctcagggctgcaccggagctccttccacgaggaggggagt
gggatgagagatgtccctgcatggttgaagagtctccgtctccataagtacgctgctctc
ttctctacaatgacctacgatgagatgatgtcgctgaccgaagagctactggaggcacag
cagaaagtcactaaaggagcaaggcacaagattgttatcagcattcagaaactcaaagag
agacagcaccttcttcgcagcctggaaaaggatgtgttggagggcagtaatctacgcgcc
ccgctgcaggagctccaccagatgatcatgacaccgatcaaggcgttcagcggcggggaa
gagtcctccctgcagcgccccctgctgagcccggagagcaagagcgccgcgccgggctcc
cacctcaccgggggaggtggcggggaggccgagtccggctcaagtgtgattgctgagggg
gatctacctgggcagttcacgcgtgtcatgggcaaagtttgcacccagctcctggtgtcg
cggtcagacgaggataacatcagctcctacctgcagctcatcgacaaatgcctgatccat
gagtcgttcacagagacgcagaaaaagaggctgttgtcatggaaacaacaggtccagagg
ctgttccggtccattccgaggaaaaccctccttgacatagcagggtaccgaccacagagg
agcaggtttggtcagtccaactctctgcccaccactggctgtgttgggggcagcgtgtcg
tccaggaggaacctccaccagttccacatgccctccaggagcttgccaggtgccagactg
ggtttactgggcagcggggggctgctgggacccacaccccgcagctccagcagcactccc
accggccccaagcagggcaggcatggtccgtggtttgccaaccccggaggaagtaacagc
atgcccagtcggacccacagctccgtgcagaggacccgctccctcccggttcacaccacg
ccacagaccatggtcatgttccagcaagccgatcttcagttaccagtgacggagccagac
ataaacaatcggctcgagtctctgtgtttgagtatgacagagcacgccttgggagatggt
tctgaccgcacatcaacgatatga
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