Cololabis saira (Pacific saury): 133458404
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Entry
133458404 CDS
T09849
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133458404
04020 Calcium signaling pathway
133458404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133458404
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133458404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133458404
NCBI-ProteinID:
XP_061594242
LinkDB
All DBs
Position
13:complement(21480212..21601445)
Genome browser
AA seq
2532 aa
AA seq
DB search
MLEQSSCSVSSQSLTDDHNALELPESPGGTGCPAASLDPSIGTVCGSSTPRHHILHPSQT
DCESWQKHRTGLAGGSSLYSEAHSLLEPQSLSTSYDTIYHPPVSGLTSTLHPNRLGLSLD
VASAFDTGAGMLGLDGDLAVSPNMMKRRRGGLIEQRDIVKAHQAHKIHSTPQARRKEWEM
ARFGDDVPGLLSSGDGGSDRNRPRDGAAASTGGISPAFKQTKAQRARTMALYNPIPVREN
CFTVNRSLFIFGEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMS
KRLEKTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMN
ISVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLE
FYSGKLHKTCTSEPGILENETVDSSEYEFPCGVRQCPAKYSCIETWIGPNDGITQFDNIL
FAVLTVFQCITMEGWTTVLYNTNDALGPMWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAK
ERERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATTI
KRRGMDVHQGPPGEEQYGDISSVGMPVNRVSVRSAKRGPTAYFRRKERILRISIRRVVKT
QTFYWTVLGLVALNTLCVAIVHHNQPLWLSNFLYYAEFLFLALFLTEMFLKMYSLGPRLY
FHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVIS
LMNSMKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEEYTPTNFDTFPAAIMTVFQILTG
EDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEAEAAFNQKHALQKAKEVGPLSSFMSSDGSRRRRPYLYRKRAIHRSRPTYSYSLEEAQG
SIREGHPPPPLNPSNSFMSRRERRKRLTMSVWEQRTSQLRRHRQMSSREILFNNPSEEKD
AQGRPLSQHRKAAQHTPSGSVKLLTDPLDSQPQVPSMSVDTPLDATLPDNVPEPSIPVLL
PESPNATAPTDSVSMALPEPPESEPVPESKRLGVNHKSTERRSPRLNGERQHRAVKKFRP
PDNIDTLTPVIGGHVRDRKALRHCDHQNGTRTQGSFPGNGEPSDSCPVIGDTGRNPEKVE
EGEAEPESKEGDVSKQEDSRQGDQSEGGNSNLKEIQRHGDLCPQTQEELPEQSEPSAFTN
PVEKTEAKEPEQEQDQDQDQDQDQDQDKSQLDSSVIIDMPNMQSSLELSTITVNNKDLET
CKSDMEETEETKPVNTVAPDSMFIFKPDNPVRRACHYVVNFRYFEMSILLVIAASSIALA
AEDPVASSSDWNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVV
GALVAFALTNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFN
ILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTQKDCQGYYIDYGKDKKEVKKRDWKRH
EFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSHGNRMEMSIFYVIYFVVFP
FFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAIGAKPLTRYMPQNRHTFQYRL
WHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYDAVLKHLNTAFTVLFSVECVLKILA
FGFLNYFRDTWNIFDFITVLGSITEIVVDLQKIDAFNMSFLKLFRAARLIKLLRQGYTIR
ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEETHINQHNNFKSFSGALM
LLFRSATGESWQEIMLSCLGGQQCETDPSLVSEVGTTDGKEGCGSEFAYFYFVSFIFFSS
FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAASGRIHYTDMYEMLTNM
SPPLGLGKKCPSKVAYKRLVLMNMPVDDDMTVHFTSTLMALIRTALEVKIARGGEDRNQM
DLDLQKEIGLIWPHLSHKTLDLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQQLE
EQKHAPMFQRMDASSLPQEILCNAKSLSFLRHSAGSALTRGGFVALSPISPQEMFLQPLS
RSREEKEAEDDEDYRSPYNPYHHPHPHHQQHHLHTLVPEVVEYKQLMQQTRQGPALIKSP
QRTASIRASSMPRLAVDPQPGMSAESQLMKRSFSTIGDQCVNGLWQEQHSLERISPDDTF
RPRQRSYRGPKINPRETSHERGRSKERRHLLSPDVSRCNSEERSREPSCERRRSRSPSEG
RTHTSHKQVNTLGSPATSASESGTPRNRRQLPQTPSRPRPYISYSPLVCRAPTSPTAAAS
SEEQIQTQEGPSGPAETSWRTDNDSRPLSAGQGSSGGHTSAPSHPSPHRYISEPYLPFHK
ELGSGGEGERQETLTFETAVATSLGRANAISSAPQLRHSWQVPNGHFRKHLVQASPGDGS
ELLSDTDEDDRC
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgctggaacagagctcctgttcggtcagttctcagtctctgacggatgaccacaatgct
ttggaactacctgaatctccaggagggactgggtgtccggcggccagtttggatcccagc
attggaacggtgtgtggtagcagcacacccaggcaccacatcctgcatccatcccagacg
gactgtgagagctggcagaagcatcgcacaggactggctggagggtcaagcctatattca
gaggctcattcactcctggagccccagagtctgtccaccagctatgacaccatttaccat
ccaccggtgtctgggcttacttccactctacacccaaaccgccttggcctctctcttgat
gtggcctcagcttttgacactggggctgggatgttggggctggatggagatttggcagtc
agtccgaacatgatgaagagacggcgaggtggtctgattgaacagagagatattgtaaaa
gctcaccaggctcataagatacatagcacaccacaggcgcgacgcaaagagtgggaaatg
gcccgtttcggagacgacgtccccggtttgttgagttcaggggatggagggtccgatcgc
aaccggccccgcgatggagcggccgcgtctacaggtgggatctcccccgcgttcaagcag
accaaggcgcagcgcgcccgcaccatggcgctgtacaaccccatccccgtccgggagaac
tgcttcaccgtcaacaggtccctcttcatcttcggggaagacaatgtggtcaggaagtac
gccaagaaaatcactgagtggcctccatttgagtacatgatcctcgccactatcatcgcc
aactgtattgtcttggccctggagcagcatctccccggagaggacaaaacacccatgtca
aagagactggagaagacagaaccatactttatagggatgttctgttttgaggcggggata
aagatcattgcccttggctttgtgtttcataaaggctcctacctcagaaatggctggaac
gtcatggacttcatcgtagtcctcagtgggatcctggctgcagcaggggcacatatgaac
atctcagtggacctgaggaccctgagggctgtgcgagtactgcgacccctcaaactggtc
tcaggcatccctagtctgcagatagtcctgaagtctataatgaaggccatggttccgctg
ctgcagattggcctgctgctgttttttgcaatcctcatgtttgctatcattggcctggag
ttttacagcggcaaactgcacaagacctgcacatcagagcctggaatacttgaaaacgag
acggtggactcgtctgagtacgagttcccttgtggcgttcgccagtgtccagccaaatac
agctgcattgagacctggattggccccaatgatggcatcacacaattcgacaacatcctg
tttgctgttctcactgtcttccagtgcatcaccatggaggggtggaccactgtactctac
aataccaacgatgccttgggccccatgtggaactggctctacttcatccctctaatcatt
atcggctcattcttcgtcctcaacctggtgctgggtgtgctctctggggagtttgccaag
gagagggagagagtggaaaaccgtagggccttcatgaagctgagacgccagcagcagatt
gagagagagctcaatggttaccgcgcttggatcgacagagcagaggaagtaatgcttgca
gaggaaaataagaactccggaccatctgccctcgatgtgctgaagcgagccaccaccatc
aagaggagaggcatggatgtgcatcagggacccccaggggaggaacagtacggtgacatc
tcatctgtgggcatgcctgttaacagagtgagcgtcaggagtgcaaaacgaggtccaaca
gcgtattttcgccgcaaggagcgtatcctgcggatttctatccgtcgcgtggtgaagaca
cagactttctactggacggtccttggccttgtagctctcaatacactgtgtgtagccatt
gttcaccacaaccagcctctctggttatccaacttcctctactatgcagagttcctgttc
ctcgctctgttcctgacagagatgttcctgaagatgtacagcttgggtccacgcctctac
tttcattcctccttcaactgctttgactgcagcgtaatcgtcggcagcatctttgaagtg
ctgtggggtttcttcaggcctgggacttcctttggcattagtgttctgcgtgcactccgt
ctactgaggatcttcaaaattaccaagtactgggcttctctgagaaacttggtcatctct
ctgatgaactccatgaagtccatcatctccctgatattcctcctcttcctcttcattgtt
gtcttcgcactccttggcatgcagctatttggcggcaggttcatctttgaggagtacacg
ccaacaaactttgacaccttccctgcagctatcatgaccgtctttcagatcctgactgga
gaggactggaacgaagtgatgtataatggcattcgctctcaaggaggagtcaagtccggg
atgtggtcctctatctactttatagttctcactctttttggaaactacacgctgctgaat
gtgttcttggctattgctgtggataaccttgccaatgcacaagaacttaccaaggatgaa
gaggaggcagaggcagcatttaaccagaagcatgctctgcagaaggccaaggaggttgga
ccgttatcctccttcatgtcttcagatggaagccggaggaggcggccctacctgtacagg
aagagagccatacaccgcagccggcctacctactcctactccctggaagaggcccagggc
agtatcagggagggccacccacctccaccactcaatccctctaactctttcatgtccagg
agagagaggagaaagaggttgaccatgtcagtgtgggaacagaggaccagccagctgaga
agacaccggcagatgtccagccgagagattctgtttaacaaccccagtgaggagaaagat
gcacagggacgtccactgtcacaacatcgtaaagccgcgcagcacacgccatctgggagt
gtgaagcttctgacggatcccctggactcccagcctcaagtgccctctatgtccgtggac
acgcccttagatgcaactttgcctgataatgtacctgaaccatcgattccagtgttgctg
ccagagtcaccgaatgccacagctcccactgactccgtgtccatggccctaccagagccg
cctgaatcggagcccgtcccagagagcaagagactgggcgttaaccacaaatccaccgag
cgacgaagccccagactgaacggtgaacgtcagcacagggctgtaaagaagttcagacct
ccagataatattgacacactgactccagtgattggaggccatgtcagggacaggaaggcg
ctgcggcactgtgaccatcagaacgggaccagaactcaaggctcttttcctgggaatggt
gagccgtcagacagttgccctgtcattggggacacagggagaaatcctgaaaaagtagaa
gagggggaagcggagcctgaaagcaaagagggagacgtgtccaaacaagaggacagcaga
cagggtgatcagagtgaaggagggaacagtaacctgaaggaaatccagcgccacggcgac
ctttgtcctcagacgcaggaggagcttccagagcagtcggagccgtctgctttcacaaac
ccagtggaaaagacggaagccaaagagccagagcaggaacaggaccaggaccaggaccag
gaccaggaccaggaccaggataaatctcaacttgactccagtgtgatcattgacatgccc
aacatgcagtcgtctcttgagctctccacgatcacggtcaacaacaaggaccttgaaacc
tgtaagtcagacatggaggagacagaggagacaaagcctgtcaacaccgtggcacctgac
agcatgttcatcttcaaacctgacaacccggtgcgccgagcgtgtcactatgtggtgaac
ttcaggtactttgagatgtccatcctgttggtcatagctgccagtagtattgcgctggct
gcagaggaccctgtagccagctcctctgactggaataaggttcttcgctactttgactat
gttttcactggagttttcacttttgaaatgattataaagatgattgaccaaggtctgatt
cttcacgatggctcctacttcagagacctgtggaacatcctggacttcatcgtcgtggtg
ggagcactggtggccttcgccctcaccaatgtgatgggaaataacaaaggaagggacatt
aagaccatcaaatctctgagggtgttgcgtgtactccgacctttgaagaccatcaaaagg
ctgccgaaactgaaggcggtgttcgactgtgtagtgacgtctcttaagaacgtcttcaac
atcttgattgtctacaaacttttcatgttcatctttgccgtcatcgctgtgcaactcttt
aaggggaagtttttctactgtactgacagttcaaaggacacacagaaagattgccagggt
tactacattgattacgggaaggataagaaagaggtaaagaaaagagactggaagaggcac
gagtttcattacgacaacgtcatctgggctttgctaacgctgttcacggtctccactgga
gagggatggcctcaggtcctgcagcactccgtggatgtgacagaagaggacagaggtcca
agccacggcaacaggatggagatgtcaatcttctatgtcatctattttgtcgtctttcct
ttcttctttgtcaatatttttgtggctctcatcatcatcaccttccaggagcagggggac
aagatgatggaggagtgcagtctagagaaaaacgagagagcgtgcatagactttgccatc
ggtgcaaagcccctgacccggtacatgccgcagaaccgacacacgttccagtaccgtttg
tggcattttgtggtctcgccttcgtttgagtacaccgtcctggccatgattgctctcaat
actatagtgctgatgatgaagtattactctgcgccgccagcatatgatgccgtattgaag
cacttgaacacagctttcactgtgctcttctctgttgagtgtgtgctcaagatcctggcc
tttggctttctgaactactttcgagacacttggaatatttttgacttcatcactgtcttg
ggcagcattactgagattgtggtagacttgcagaaaattgatgcgttcaacatgagtttc
ttgaagctgttccgagctgctcgtctgatcaaactgctgagacaaggctacaccatccgc
atcctcctgtggaccttcgttcagtcattcaaggcgttgccctatgtgtgcctgctcatc
gccatgctcttctttatctatgccatcattggcatgcaggtgtttgggaacattaaattg
aatgaggagacccacatcaaccaacacaacaacttcaaaagcttctctggtgctctgatg
ctgctgttcaggagtgccaccggggaatcgtggcaggagatcatgttgtcgtgtctggga
ggacagcagtgtgaaaccgacccatctctcgtgtcagaagtagggactactgacggaaag
gagggctgtggctccgaatttgcctatttttactttgtgtccttcatcttttttagctcc
ttcttgatgctgaacctgtttgtggctgtgatcatggataactttgaatatcttacaaga
gactcgtccatcctgggtccgcaccacctggatgaatttgtccgaatctggggagagtat
gatcgcgctgccagtggccgcatccattacactgacatgtatgagatgttgaccaacatg
tcgccacctctaggcctgggcaagaaatgcccctccaaggtggcatataagagacttgtc
ctgatgaacatgccagtcgatgatgacatgaccgtccacttcacatccaccctcatggcc
ctcatccgcacagccctcgaggtcaagatagcgagaggaggagaagacagaaatcagatg
gatttggatctgcagaaggagattggtcttatctggcctcacctttctcataagaccctg
gacctactggttcccattcacaaagccagtgacatgaccatagggaagatctatgctgct
atgatgatcatggattattataagcaaagcaaagcaaagaagctgcgacagcagctggaa
gaacagaaacacgctcccatgttccagcgtatggatgcgtcctctcttcctcaagaaatc
ctatgcaatgccaaatccttgtcattcctcaggcacagtgctggatctgctctcaccagg
ggggggtttgtggcactcagccccatttcccctcaggagatgttcctgcagccactgtct
cgctccagggaggagaaagaggcagaggatgacgaagactaccgctcaccttacaaccct
taccatcatccccatccccaccaccagcagcatcatttacacacactggtgccagaggta
gtggagtacaaacaactgatgcagcagaccaggcagggcccagcacttattaaatcacct
cagcgcactgcatccatcagagcatcttctatgccccgacttgctgttgatccacagcct
gggatgtcagcagagagtcagctgatgaagcgctccttctccaccatcggagatcagtgt
gtgaatggcctctggcaggagcaacactctctggagagaatcagtcccgatgacacattc
agaccccggcagaggagttacagaggcccaaaaatcaacccaagagagacgagtcatgag
agaggacgatcgaaggaacgacgccacctgctgtctcccgacgtgtcccgctgcaactct
gaggagcgaagcagggagccttcctgtgagaggagacggtcccgttcaccaagcgaagga
cgcacacatacctcgcacaaacaggtgaacacattaggcagtcccgccacctctgcttcg
gagtccggtactcctcgcaatcggcgacaactgccccagacgccctctcgcccgcggcct
tacatctcttattctcctctggtctgccgagctcccacctctcctactgctgcagcctct
tctgaggaacagatccagactcaagaggggcctagtggccccgctgagacctcgtggagg
actgacaatgacagcagacccctgtctgcaggtcagggctcatctggaggccacacctca
gcaccgagccacccatctcctcaccgctacatatcagagccctacctcccattccacaag
gaactcggcagtggcggcgaaggtgagaggcaggagaccctcaccttcgagaccgccgtg
gccaccagcctaggacgtgccaacgccatcagctccgcccctcagctcagacactcctgg
caggttcctaacggacatttccggaagcacttggtccaggcgagtccaggcgacggcagc
gagctgctaagtgacacagatgaggatgaccgttgctaa
DBGET
integrated database retrieval system
