Cololabis saira (Pacific saury): 133458415
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Entry
133458415 CDS
T09849
Symbol
rx1
Name
(RefSeq) retinal homeobox protein Rx1
KO
K09332
retina and anterior neural fold homeobox protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133458415 (rx1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133458415 (rx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
133458415
NCBI-ProteinID:
XP_061594259
LinkDB
All DBs
Position
13:complement(21893929..21901917)
Genome browser
AA seq
348 aa
AA seq
DB search
MHLSLDTMNMVDDSCLSPSNFHEMGKGGGAAAGGHVHSIDVILGFSKDQDPLLSPAGAPG
PHKANIDDLAEHGKQRDASAHPSYSGHLSSVRNSSTEQQEYHNTGLFTNKSDDELGELRK
SIESDEGKSPEPCKDDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVN
LPEVRVQVWFQNRRAKWRRQEKMDASTMKLHDSPMLSFNRPAPVHSSMGPMTNSLTLDPW
LPSPLSSATPVHSIPGFMGPAHGLQPSYSSHGFLNSPPHAPHPHSHAHPHPPMGQGMQSM
APPPYQCPAPYTDKYPLEDVDQRSSSIAALRMKAKEHIQHMDKTWQPM
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatcactggataccatgaacatggtggacgacagctgcctctctcccagcaac
ttccacgaaatgggcaaaggtgggggtgctgcagcggggggccacgtccacagcattgat
gtcatccttggtttcagtaaagaccaggaccccttgctaagtcctgctggtgctccgggg
ccccacaaagcaaatatagatgaccttgcagaacatgggaagcagcgggatgcctcggca
cacccttcctacagtggacacctttcttctgtgagaaacagtagcacagagcagcaggag
taccacaacactggtttgttcacaaacaagagcgatgatgagctgggcgagcttaggaag
agcatagagagtgatgaaggcaagtctcccgagccatgcaaggacgatcagcccaaaaag
aagcacagacgaaaccgcaccaccttcaccacctaccagctgcatgagttggagcgtgcc
ttcgagaagtcccactacccagacgtgtacagccgagaggagctggccatgaaagtgaac
cttccagaagtccgagttcaggtctggtttcagaaccgcagagcaaaatggcgtcggcag
gaaaaaatggatgcgagcaccatgaagctgcacgactcccccatgctgtccttcaaccgt
ccagcaccagttcacagcagcatgggtccgatgaccaactccctcacactggacccctgg
ctgccctctcccttgtccagcgctacacccgtccacagcatcccgggcttcatgggtcca
gctcacggcctccagcccagctactctagccatgggttcctcaactcccctccgcatgct
ccacatcctcattctcacgctcatccccatccgcccatggggcagggcatgcagagcatg
gcgcctcctccttaccagtgtccagcaccatacactgataagtatcctctggaggacgta
gaccagcgcagctccagtattgctgcactgagaatgaaagccaaggagcacattcagcat
atggacaagacctggcaacccatgtga
DBGET
integrated database retrieval system
