Cololabis saira (Pacific saury): 133458439
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Entry
133458439 CDS
T09849
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133458439 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133458439 (hnrnpm)
Spliceosome [BR:
csai03041
]
Common components
Common spliceosomal components
hnRNP proteins
133458439 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
RBD_DEAH11
HnRNP_M_NLS
DUF7552
Motif
Other DBs
NCBI-GeneID:
133458439
NCBI-ProteinID:
XP_061594306
LinkDB
All DBs
Position
13:complement(22695800..22705422)
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AA seq
710 aa
AA seq
DB search
MSSEQPENTVEAPEQSPPSPQQLQLQGEMNGKPKNEPSSRKERPQKRGGGGRFEPYGNAN
KRYRVFVSNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTEELMKKA
VEKVNKHNLMGRPLKVKEDPDGIISQREINKSQGGGPPGVHGGMGGMGGMGGMGGMGGMG
GMGGMGGMDRMDRMGPGPNGPMVSIPPSLMNNPNIPNEIIHGLQAGRIGSTIFVANLDYK
VGWKKLKEVFGMAGVVLRADILEDKDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRTM
HVKLDEKSLPKDFGPPDRSAALPRGLSGIGLGLGPGGQPIDATQLNRGGGGGGGGGMGNM
GPGGMDGMGFGNMGGGRMGGGGGGGGGGMDNFGGMNNMDRFGSSGMGRMNEMDRGGAFDR
EFGRNEMGMSRNSFGDSFERGMGNTLGMERMSSGMDRMGSGMDRMGGMDRMGMDRMDRTS
DVDRLGGSGFDRMGSGMDRMGPNMDRLGPGLDRMTSNMDRMGPSGFDRLGPSNMDRMGSN
MDFGSSMGMDRMGNSGIDRMGSNFDRMGSAGGIDRFPSGGLDRMSSGMDRMGSGGGVGQF
DRAGDLDRGFGGNSFGAGAAGPGTGGGNLRKGCQIFVRNLPFDFTWKMLKDTFNTCGMVQ
YADIKMENGKSKGCGVVRFDNPETAERACRTMNGYRLSGREIDVRIDRNA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgagcagcccgagaacaccgtggaggccccggagcagtccccgccgtcgccg
cagcagctccagctgcagggtgaaatgaatggaaaacccaagaatgagcccagttcaagg
aaggagagaccacagaagagaggtggaggtggtcgtttcgaaccctatggcaacgcaaac
aagagataccgtgtttttgtcagcaacatcccctatgatgtgaaatggcaggccctcaaa
gacctgatgaaagaaaaagtgggtgaggtaacgtacgtggaacacttaatggacgctgaa
ggcaaatcgaggggttgtgctgttgtcgagtttaggactgaagaattaatgaagaaagca
gtggaaaaggtcaataagcataacctcatggggcgacccctaaaagtgaaagaggatccc
gatggaatcatttctcagagggaaattaacaagtcccaaggtggaggcccaccaggagtc
catggaggcatgggtggaatgggaggcatgggtggtatgggaggaatgggcgggatggga
ggcatgggtggaatgggaggaatggaccgcatggatcggatggggcctggaccaaatggc
cccatggtcagcattccccccagcctgatgaacaacccaaacatccccaatgagattatc
cacggtctccaggctggcaggattggcagcaccatctttgtagctaatcttgactacaaa
gtggggtggaaaaagctgaaggaggttttcggcatggcaggcgtggtgctgagagcggac
attctagaggacaaggatgggaaaagcagaggcatgggcacagtaacctttgaaatgccc
attgaagcagtccaggctgtctccatgttcaatggacagctcctgttcaacaggaccatg
catgtcaaactggatgagaagtccctccctaaagattttggaccaccagacagatcagct
gctcttcctcggggcctgagtggtattggtttgggtctgggacctggtgggcagcctatt
gatgcaacccagctcaacagaggtggtggtggtggaggaggaggaggaatgggcaacatg
ggcccaggaggaatggatggaatgggatttggtaacatgggtggtggtcgcatgggagga
ggaggcggcggaggaggaggaggaatggacaactttggaggaatgaacaacatggaccgt
tttggttcttcaggaatgggccggatgaatgagatggaccgtggtggtgcttttgacagg
gaattcggccgaaatgaaatgggaatgtctcgcaatagttttggagactcctttgaaaga
ggaatgggaaacactctgggtatggagcggatgagctctggaatggaccgaatgggaagt
ggcatggatcgcatgggagggatggaccggatgggcatggacaggatggatcgaacatct
gatgtagacaggctaggaggatctggattcgatcggatgggctcaggaatggatcgcatg
ggtcccaatatggacagactcggaccgggtttggaccgcatgacctccaacatggatcgc
atgggccccagtggattcgaccgtctaggcccgtctaatatggatcgcatgggtagcaac
atggactttggctcttcgatgggaatggatcgcatgggcaactccgggatcgacagaatg
ggaagcaactttgatcgcatgggttctgccggaggaattgaccggtttccctcaggtggc
cttgaccggatgagctctggcatggatcggatgggatctggaggtggggttggtcagttt
gatcgcgctggtgatttggatcgtggatttggtgggaattcctttggagctggagctgca
ggacctggaactgggggaggaaatctcaggaagggatgccagatctttgtcagaaatctg
ccgtttgacttcacctggaagatgttaaaagacaccttcaatacatgtggtatggtccag
tatgccgacatcaagatggagaatggcaagtccaagggatgtggagtggttcgcttcgac
aaccctgaaactgctgagcgtgcttgccgaaccatgaatggctatcggctgagcggaaga
gagattgacgttaggatcgacagaaatgcataa
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