KEGG   Cololabis saira (Pacific saury): 133458524
Entry
133458524         CDS       T09849                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
csai  Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:csai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csai03036]
    133458524 (kdm4b)
Enzymes [BR:csai01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     133458524 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     133458524 (kdm4b)
Chromosome and associated proteins [BR:csai03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    133458524 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD PHD_4 DUF4537
Other DBs
NCBI-GeneID: 133458524
NCBI-ProteinID: XP_061594504
LinkDB
Position
13:complement(28348753..28402415)
AA seq 1243 aa
MATDMPLDTVSAPDPGPASLPDPAPASFPSLSSSSAPDQIPAQEPAIAETPETAETSERE
AAPVLSPAQPVGPDEPPTLFPESEVPTGPQMAPIPPPLPKFASKNPSCKIMTFRPTMEEF
KDFAKYIVYMESQGAHRAGLAKVIPPEGWKPRKSYEAIEEMVIPAPIMQVVTGQSGLFTQ
YNIQKKSMTVGEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDED
VPEWNIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQ
PKSWYTIPPEHGKRLERLAQGFFPGSCQGCDAFLRHKMTLISPSILKKYSIPFDRITQNE
GEFMVTFPYGYHAGFNHGFNCAESTNFATLRWVDYGKNATLCSCRKDMVKISMDVFVRCL
QPDRYDMWKQGKDVTVLDHLKPTELTSPELELWRKQRVTFRVNLLRRAMQKMKQVRRLKL
EEVKVLAEEGIELNAAEYQRQVEEREAQRRQEREERLAREAMMTLEAMEREEQEAAAKAA
GTPVVEEAPAPEPEPEPEAKPQILTDDTEKKKQKKPKTTSNMPTITSGFEQAFEQFATSS
VVNSKKKMFSHFDTESTDIPVEETPTQATYTKTKMPTEVKKSRRHPLSKPPMRTPLSIVK
QDPTSDKELSSPMSMDSSMKKQEHLWQTHSPNFVAEKTFNDAVAVLEPHCAVCSLFCPYI
RKENTAESPPARHSHHGRSTRPLVPEMCFSVGAGNTEPLPTNYHIGEDGTSLLIRCSSCN
MQVHASCYGVKPDSVSASWTCSRCSTGTWTVECCLCNLRGGALKVTTDNRWVHVICAIGV
PEVRFVNAIEREPVDVSAVPENRKNLKCVFCHGRNPNQKHGACIQCTYENCATSFHVTCA
QIAGVVMKPADWPYMVSITCHKHKKSTPKVPKPSNSNSNSKPSKPPKPSPKPSPKPRTVP
KTPQGLDLGHRVIGRNSDGWYYHCTTIGMATQTFYEVNFDDGSYCDNVHPENVLSHDCLR
NGPPDDGEMIVVGTPEGLILNAAFVKPHTHKLYQVEFQDRSQLILKHSDIYRLEADLPKR
VRARLAIPSAQEDASSADEAKAAKRPRLPSSSALPANTPMETAHPAFPQTAAPLAAPALK
HHSISTPPASRPLSQPAESPMDTSGSLSDAFTEPLLASDPTLAPHSAPFQATLNSDPLLS
APSPQPPQHHLSESYTPSSGYVSYMETLLHSHFPQDDNRSSLY
NT seq 3732 nt   +upstreamnt  +downstreamnt
atggccaccgacatgcccttggacacggtgtcggctcctgaccctggcccagcctcactc
cctgatcctgccccagcctcatttccttctctcagctccagttcagccccagaccagatc
cctgcccaggagccagcgatcgctgaaacccctgaaactgctgagacctcagaacgagaa
gctgctccagttctcagcccagctcagcctgtgggtccagatgaacccccaacacttttt
cccgaatctgaagtgcccacaggtcctcaaatggcacctataccaccgcccctgccgaag
tttgcttccaagaaccccagctgcaaaattatgacctttcggccgaccatggaggaattc
aaagattttgccaaatatattgtctacatggagagtcaaggagctcatcgcgccggccta
gcaaaagtgattccaccagaaggctggaagcctcgcaagtcctatgaagcaattgaagag
atggtgataccagctcctatcatgcaagtggtgactggtcaatctggcctgttcacgcag
tacaacattcagaagaaatcaatgactgtgggtgaataccgcaagctggctaacagcaag
aagtactgcacgccacgccacaaagactttgacgacctagaaaggaagtactggaaaaat
ctgacatttgtgtcaccgatttacggtgctgatgttagtggttccatctatgatgaggat
gttccagagtggaacattggccacctcaatacgctactggatatggtcgagcaggaatgc
ggcattgtcatcgagggtgtcaatactccttacctgtattttggcatgtggaagaccacc
tttgcttggcacactgaagacatggacctctacagcatcaactatctgcactttggacaa
ccaaagtcctggtacactatcccacctgagcatggcaagaggctggagaggctggcacaa
ggctttttcccgggcagctgccaagggtgtgacgccttccttcgccacaagatgacgctg
atatctccatccatcctgaagaaatacagtattccctttgacagaataactcagaatgaa
ggagagtttatggtgacttttccttatggctaccacgccggcttcaaccacggcttcaac
tgcgcagagtctactaactttgccacgctgcgctgggtggactacggcaagaacgctacc
ctgtgttcctgtcggaaggacatggtgaagatctccatggacgtgtttgtgcgctgcctg
cagcccgatcgctacgatatgtggaagcagggtaaagacgttacagtgctggaccacctg
aagcccacagaactgaccagtcctgaactggagctctggaggaagcagcgcgtcaccttc
cgcgtgaacctgctgcgaagggccatgcaaaaaatgaagcaggtgcgtcgtctgaagcta
gaggaggtaaaggtgctggcagaggagggaattgaactgaatgctgccgagtaccagcgt
caggtggaggagcgcgaggcgcagcgcaggcaggagagggaggagcgcctcgccagagag
gccatgatgaccctggaggcgatggaacgtgaggaacaagaggctgctgccaaagcagca
gggactccagttgttgaagaggcaccagcaccagaacccgaaccagaaccagaggccaag
cctcagatcttgacggatgacactgagaaaaagaagcagaaaaagccgaagacgacgtcc
aacatgccaaccatcacgtctggatttgaacaagcatttgagcagtttgctacgtcttct
gtcgtcaattcaaagaagaagatgttcagtcatttcgacactgagtcaacagacatcccc
gtggaagagactcccacccaggcgacctacaccaagacgaaaatgccaacagaggtgaag
aagagtcgccgccacccgctgagcaagccacccatgcgtacccccctgtccatcgtcaaa
caagacccaacaagtgacaaagagctgtcctccccgatgtcgatggatagcagcatgaag
aagcaggagcacctgtggcagactcattcacccaacttcgtggcagagaagacctttaac
gatgcggtggctgtgctcgagccgcattgtgccgtctgttcactcttctgtccctacata
cggaaagagaatacggctgaatccccaccggcccgtcacagccatcacggccgttcaact
cgtccgctcgtcccagagatgtgcttcagcgtcggagcaggaaacacagagccactgcca
accaattatcacattggggaggatggaaccagtctcctgatccgctgttcgtcctgtaac
atgcaagttcatgccagctgttacggcgtgaagccagattctgtcagcgcctcctggacg
tgctccaggtgttccacaggaacctggacagtggagtgttgtctctgcaacctacgagga
ggggctttgaaggtcaccacggataacaggtgggttcacgttatctgtgccatcggcgtg
ccagaggtgcgcttcgtcaacgctatcgagagagagcccgtggatgtcagcgctgtacca
gagaaccgcaagaacctgaaatgtgtgttctgccacgggaggaatccgaaccagaaacac
ggcgcctgcatccagtgcacatacgagaactgtgccacctccttccacgtcacctgcgcc
caaatcgctggcgtggtgatgaagcctgcagactggccctacatggtgtccatcacctgc
cacaagcataaaaagagcactcctaaggttcctaagccctcaaactcaaactcaaactca
aagccctcaaagcccccgaagccctcaccgaagccctcaccgaagccccggacagtaccc
aaaactcctcagggcctggatctgggccacagggtgattggccgcaacagcgacggctgg
tactaccactgcaccaccatcggcatggcaacacagactttctacgaggtcaactttgat
gatggctcctactgtgacaacgtccacccagaaaacgtacttagtcacgactgcctgcgc
aacggtcctccggacgacggggagatgatcgtggtcggcacacctgagggtctgatcctc
aatgctgcttttgtcaaaccccacacccacaagctctaccaggttgagtttcaggaccga
agtcagctgattctcaagcattcagacatctatcgcctggaagctgacttacccaaaagg
gtcagagctcgactggctataccttcagcgcaggaggatgcttcctcagcggatgaagcc
aaggcggctaaacgtccccgtctgccctccagttcagcgttacctgccaacacccccatg
gagacggcccacccggccttccctcagaccgcagccccgctagcagcaccagcactcaag
catcacagtattagtactccgccggcgtccagacctttgtcccagccggccgagtccccg
atggatacgagcggcagcctcagcgacgcgttcacggagccgctcctggcctcggatccc
acgctggctccgcactccgctcctttccaagccactttgaactctgaccccctcctctcg
gccccgtcccctcagccgccgcagcatcacctgtcagaaagctacacgcccagcagtggc
tacgtctcttacatggagacgcttcttcattcacattttcctcaggacgataaccggagc
tccctgtattag

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