Cololabis saira (Pacific saury): 133458541
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Entry
133458541 CDS
T09849
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133458541 (tp53bp1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
Tudor_3
DUF4537
BRCT
BAHCC1-like_Tudor
Tudor_2
Motif
Other DBs
NCBI-GeneID:
133458541
NCBI-ProteinID:
XP_061594536
LinkDB
All DBs
Position
2:complement(14019762..14051079)
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AA seq
1702 aa
AA seq
DB search
MDPGGSDLDSSLPQPDTPCLIVEDSQPDSVALEDDPESSYRALLARRLATLQPAARSPVL
ELISSPLGSRCSQTDSRSESNSQSEHDVVAANPSSPLPEESQVLNICPPPGKRKSPPEDS
EMESGADSTTNCIRSEEGSSQFGFLELSQSQDLQAEEHIVPQTDSQRRQTLAEQKASSRT
SESQCNKAVRPEVSSSSSSDSLGQSGRQISVQVLLHSQNLQDAGEQDQQDRDILSSQEDL
FDADKTGAAVDSTVSEPDQQGRPTSTPAHSLRLLHLSGQGTLVQESLSQSSVDYVAPTPD
NFPHTPLIIPSSPTEAGNEHGADEPMDTSLPPDNQAEEKDEPMETEAASKPRPCASTPVS
QNSPGFAFERVLSVPSQPEFSHDVFVPTQSQEVPEQLHKKSASLPSETQSQQPESALFAL
PLQLSVNTETCSPHHSIPQQTEDDSQATQIEELEEPSSVDTSDSVISHPNQRNESEAVPS
ELPAATASKASVSAESPRQRSECAASEQSHLSQKSDCHEKKETSLNVQNVNVKDRSDSEE
AVSCSQAKVESSNVTVSNCVQETPCSLPSQSVISQTSAVDVKSSVDSKAETAKSQSVESV
SLNSQTVKGRMNEGEQGDEEVLMEEEEEETSGGASAIDLVLSQSRLLSPEPMEEEKSQDG
GQDSIIVVTDSERDSQVLQKGVTSQPKAVVSTNGHESQSREKEVHVDPDGLSQTEKEGRE
PVVLKDKSLSDSSGEISFHFTLPKEGELIGPAVGATPPLISQLKQTLRHSTPIEISSLAE
KADVAGDISADVVMAGGNVAAGESGEEAAEKEGGKLSLRMKLVTPVEEGSSERFSLQKPA
LSEEDGPVVKVTAVSMAVTSSPSVFTRVRQVHRQQEVEDDYQPGANATPVRGDLFASPQR
NSPASSAGCNSLPNSQSEPSRQEALAAPAVAPGEPSSGRRGPPEPAPPTPTNVRQKVVPR
HNSDNAVTSTPSKRRQQSVSQQTSFDAAGPRSSPGRGEPESPSFRRTAGPAHRRHVRTIQ
EVRTTVTRVITDVYYEDGKEVDRKVTEESEEPVVDCQVLDSDISPCRTGSSSLTSGDLAD
ISSLSSKTSSLHHSSSGTSSITSHIRPDFFMPPGRGAKSISPRRGGGHQQRGHRGHRAGA
VLTMGRGYSTFGSRAFVPLTPRGRARRGRPPSRSSLSRGGRVGSLQRLGVHGQPPSSPED
DPYARMLPPRLPASPTDAELPSRSDSLRSSPELASSAGSSFVGLRVVAKWSSNGYFYSGR
IMKDAGDSRFRLRFDDGYECEVAGKDILLCDPIPLETEVTALLEDEYFSIGVVKGHKTEG
QDLFYGVERDGQRQWYNRTAVILSLEQGNKLREQHSLGPYEPSNPLTKASDISLDNLVEG
KRRRRGTPGGPNTPNRNSSSSPRSPGPSGKRKLMSSEDGQTPSKRGRRRGGARAAQRVAV
CNTSGSGTDLPLQSGDVTETHGPLPQNTSLFMGFAFMLTASSESDRLTNKISSDDEEDYV
QTGPYNKVYTESQLQAGGGFILPDFNEEQCKAAYQSLLIADQHCRTRKYLLCLSSGVPCV
SHIWVRDCCKENKLLNYRNYLLPAGVGPDDNIVEWHPRSSPFKALRVLLVFEEPVELWAQ
LMTLGGASSVRQFQPDKDGSDIPAGKYDVVVTDHTCPPLVEKNVTSQEVPLVSSEWLIHS
VICGERLGFHSKPQYRHESSSS
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcgggagcgacctggactccagcctgccgcagccggacaccccgtgcctg
atcgtggaggactcccagccggacagcgtggccctggaggacgacccggagagcagctac
cgagccctgctggcccgccgcctggccaccctgcagcccgccgcccgcagccccgtcctg
gagctgatatcatcaccattaggaagtagatgctctcagactgacagccgatcagagagc
aacagccagtccgaacacgacgttgtagcagcgaatcccagctcacctctgccggaggag
agtcaagttctaaacatctgtcctccaccaggcaaaagaaagagccctccagaagactct
gagatggaatctggagctgattcgacaacaaactgcatccggtctgaagagggatcttct
cagttcggtttccttgagctgtctcagagtcaagatcttcaagctgaggaacacattgtc
ccgcagacggatagtcagagacgccagacattagcagagcagaaagccagttccaggact
tcagagagccagtgcaacaaagcagtgaggcctgaggtgagctccagcagctcgtcggac
tccctgggtcagtcaggtcggcagataagtgtccaggttctgctgcactcccagaacctc
caggacgccggtgagcaggaccagcaggaccgcgacatcctgtcctcgcaggaggacctg
tttgacgctgataagacgggtgctgcggttgacagcacggtttctgagccggatcagcaa
ggtcgccccacgtccacaccagcccattccctccgactgctgcatctgtccggacaggga
actctggtccaggaaagtctgtcccagagctccgtcgactatgtcgcccccacccctgac
aacttcccccacactcctttaattattcccagctcgccaaccgaggccggaaatgaacac
ggtgctgatgaaccgatggatacttcgctgcccccagacaaccaagcagaggaaaaggat
gagccaatggaaactgaggctgcctccaagccacgcccatgtgcctctacgcctgtatcc
cagaattcccctggttttgcttttgagcgagttctctcggtaccctcccagccagagttc
tctcatgatgttttcgtcccgacgcagagccaggaggtgcctgaacagttgcataagaag
tcagcgtcgttgccttcagaaacacagtctcagcagccggagtcggccttgttcgccttg
cctttgcaactctccgtgaacacggagacctgcagccctcatcactccatcccgcagcag
accgaggacgatagtcaggccacgcagatcgaggagttggaagagccgtccagtgttgac
accagcgactcggtgatttcacatcccaatcagagaaatgagagtgaagccgtcccctct
gaactaccagctgctaccgcttccaaagcttctgtctctgctgaatcaccgaggcagcga
agcgaatgtgccgcgtctgaacagtcccatctgtcgcagaagtctgactgtcacgaaaag
aaagaaacctctttgaatgtacaaaatgtgaatgtaaaagacaggagcgacagtgaagag
gccgtgtcttgttctcaagctaaggttgaatcctctaatgtgactgttagtaactgtgtg
caggagactccctgcagcttaccgtcacagtcagtgatctctcaaacttctgctgtcgat
gttaagagttctgtagactcaaaagcggaaacagcaaagagtcagtctgtagagtcggtg
tcacttaacagccagactgtcaaaggcagaatgaatgaaggtgagcagggagatgaggag
gtactgatggaggaggaggaggaggagacctcaggaggagcatcagcaatagacctggtc
ctctcccagagccggctgttgtcacctgaacccatggaggaagagaagagccaagacgga
ggtcaggacagtatcatcgttgtaacggacagcgagagagactcccaggttctccagaaa
ggtgtgacgtcacagccaaaggccgtcgtctccactaacggccatgaatcccagagtcgg
gagaaagaagttcacgtcgacccagatgggttatctcagactgagaaggaggggcgtgag
ccggtggtcctcaaagacaagagcctgagcgacagctcgggagaaatttcattccacttc
acacttcctaaagaaggggagttgattggtcctgctgtcggtgccacgccgcctctcatc
agccagctgaagcagacactcagacacagcactcccatcgagatcagctccctggctgaa
aaggcagacgtagcaggagacatctctgcagacgtggtcatggccggcggcaacgtggcg
gcgggggaaagcggcgaggaggcggctgagaaagagggtgggaagctgagtttgaggatg
aagttggtgaccccagttgaggaaggcagctcggagcgcttcagtctgcagaagccagcg
ctatcagaggaggatgggcccgttgtcaaggttaccgctgtttccatggctgtaaccagc
agtccgtccgtgttcacgcgggtcaggcaggtgcaccgccagcaggaggtggaggacgac
taccagcccggagccaacgccacacctgtcaggggtgacctgttcgcttcacctcagaga
aactccccggcgtcctcagcggggtgcaacagcctcccgaacagccagtcagaaccgtcc
cgacaggaggcgttggcagcgcctgccgtcgcccccggagagccgtcgtcggggaggcgg
ggaccccctgagccggcccctcccaccccaaccaacgtcaggcagaaggtggttccccgg
cacaactctgacaacgccgtcacttccaccccgtccaagcgacggcagcagtcggtctcc
cagcagaccagcttcgacgcagcggggccacgctcgtcccctggcaggggggaaccggag
tctccgtcgttcagaaggaccgctggccccgcccaccgcagacacgtgcgcaccattcag
gaagtgaggaccacagtcacgcgggtcatcaccgacgtgtattatgaggacgggaaggag
gtggaccgcaaagtcaccgaggagagcgaggagcccgtggtggactgtcaggtcctagac
agcgacatttctccgtgtcgcacaggcagcagctccctgacctccggtgacctggctgac
atcagctccctgtcgtccaagacctccagcctgcaccacagctcctcgggaaccagcagc
atcaccagccacatcaggccagatttctttatgccccccggcagaggggccaaatccata
agtcccaggaggggaggtgggcatcaacagaggggtcacaggggtcacagggcaggggcg
gtgctcactatgggcagaggctacagcacctttgggtcccgggccttcgtcccgctgacc
cccagagggagggctagaaggggccggcccccgtcccgctcctccctgtccagggggggt
cgcgtgggctctctgcagagactgggagttcacggccagccaccttcctccccggaggac
gatccctacgcccgcatgctgccgccgcgcctccccgccagccccaccgatgccgagctc
cccagccgctcggactccctcaggtcctcgccggagctggccagctccgccgggagcagc
ttcgtcggcctgcgcgtggtcgccaagtggtcgtccaacggctacttctactcgggccgc
atcatgaaggacgccggggacagcaggtttcgccttcggttcgacgacggctacgagtgc
gaggtggcggggaaggacatcctgctgtgcgacccgatcccgctggagacggaggtcacg
gctctgctggaggacgagtacttcagcataggagttgtgaagggccacaagacggagggc
caggatctgttctacggtgtggagcgggacgggcagaggcagtggtacaaccggaccgcc
gtcatcctgtcgctggagcagggcaacaagctgagggagcagcacagcctgggcccctac
gagccctccaaccccctgaccaaggcctccgacatcagtctggataacttggtggagggg
aagaggaggcgcaggggaacccccggaggtccaaacacacccaaccgcaactcctccagc
agcccgcggagccccggcccctccggcaagaggaaactgatgtcctccgaggacggccag
acgccctccaagagaggccggaggaggggcggagccagagctgctcagcgggttgcagtg
tgcaacacctctggcagcggcacggacctcccgcttcagtcgggggacgtgacggagacg
cacggcccgctgccccagaacacctccctcttcatgggcttcgccttcatgctgacggcg
tcgtccgagagcgaccgcttgaccaataagatctctagcgacgatgaggaggattacgtg
cagactggtccgtataacaaagtgtacactgagtcccagctgcaggcaggtggcggcttc
atcctcccggacttcaacgaggagcagtgtaaagcagcgtaccagagcctcctcatcgcc
gaccagcactgccgcaccaggaagtacctgctgtgtctgtcgagcggcgtcccgtgtgtg
tcgcacatctgggtgagagactgctgcaaagagaacaagctgctgaactacaggaactac
ctgctgccggccggcgtggggccggacgacaacatcgtggagtggcatcctcgctccagc
ccgttcaaggccctgcgcgtcctgctggtgttcgaggagccggtggagctgtgggcccag
ctgatgaccctggggggagcgtcttcggtccgccagttccagccagacaaggacggctcc
gacattcctgctggaaagtatgacgttgtggtgacggaccacacctgtccaccgctggta
gagaaaaatgtgacatcccaggaagtcccgctggtgtcgtccgagtggctcatccacagc
gtgatctgtggcgaacgcctgggtttccacagcaagcctcagtaccgccacgagtcctcg
tcctcataa
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