Cololabis saira (Pacific saury): 133458542
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Entry
133458542 CDS
T09849
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai02010
ABC transporters
csai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133458542 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133458542 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133458542 (abca7)
Transporters [BR:
csai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133458542 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
133458542
NCBI-ProteinID:
XP_061594534
LinkDB
All DBs
Position
13:28891484..28933423
Genome browser
AA seq
2380 aa
AA seq
DB search
MGFFKQLYLLLWKNVTYRRRNKVQLIIELLWPLFLFFILISVRHSHPPYKQGQCHFPNKA
LPSAGTLPWLQGIVCNINNPCFHSPTPGETPGQAGNFDNSILSRLLVDAQTLLSYSGNSS
FSGFQDLMDSVRLLGERLGSLPTLPVKECLRPNETFSNFLRTNGSLSSETVDQLMNAHLN
FQTTLTFTRIPLKEIVCNASMLDQFLTVEGRAANMTDLQTQLCDLPADVLQEAERLFLSQ
LELSKFLTRDRLMANAGDLWVISQTINSVSQELAVLLDDFSTLTSFAEMSAAIVLLSPEN
RTARPMESFRAFSRIVCGHPESGGERIPSLNWYEDNDIKSFLGRDGTEDVDPDTNNYTTP
FCRNMIQSLEANPMSRIVWRGIKPLFIGKLLYAPDTPVIQKVMKEVNKTFEDLQILQGVN
EAWKEMGPQIKNYMQTSVEIQLLKDLLQRPEIAVMVNMRLANTRWTASQIAHFLSTPPVD
TPRESGAPSTWMDLYNDLGFTISTLAQITECFSLNKLEGLETEEDLIDRALELLENRQFW
AGVVFQLPNTSLFELPPHVVYKIRMDIDDVTRTNKIKDRFWDPGPAADPFSDMRYIWGGF
VYIQDMVEGAMSSILTGVKQTTGIYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKSMVYEKEARLKETMRIMGLSTGTLWLGWFISCMVPFLISAVLLIALLKWGVILPYS
DPVVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFSFYLPYVLCATWRDYLTS
THRIVASFLSPVAFGFGCEYLSMFEEQGLGLQWYNLQASTVEGDKFSFTTSIMMLYLDAF
IYSIAAWYIEAVFPGDYGIPRPWYFIFQLNYWGGVPLEAGMPIPSAPTDQDEDHIEPEPS
NMNLGVNIRNLVKIYKKGGKIAVNHLNLKFYEGQITCFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRYDMDIIRTTLGVCPQHNVLFDALTVEEHVWFYGCLKGLSEERVKAELD
TLLEDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISKGKLCCCGSPLFLKSRLGSGYYLTVVKKE
EMNTNTPSSSSICTSTSSSTNKLPPMVKDSESSLSEDTGLGSEECSPYLAALLSLVQQHI
PGARLVEETRREAVINLPQTAAKDSSLAVVLSKLDQKLPELGISSYGLSDSTLEEIFLQV
AEETGVDREPDPQGGSPNTQHPPEQGTGGQPAEEQPAEEPETGRKRLRKRDAQETELLSG
DGQGGEPVTGVWLIWQQLRALFVKRWLYTRRSRRGFLAQIVLPAMFVLIALFFSLIVPPF
GTYPSLQLQPWMYGEQYTFFSNDDPGNPATENLLEALLDQPGFGTRCMEKEEQDHNTSHQ
CELERGGRFQRPQVSFSTWQMFSRGNWSRDNPSPGCQCSTEDVLRMLPDCPEGAGGLQPP
QIKRATGDILQNLTSYNISDYLVKTYPQILKKSLKAKNWVNEFRYGGFSLGGKASTTEPQ
VEHLQDSVVAIRTRYRVPQNSSLDHLLDRLPEFLGGMHSENNVKVWFNNKGWHAMVSFVN
VMHNGMLRASLPPGPERMRHGITVYNHPLNLTKEQLTEVAMMTTSVDVLISICVIFAMSF
VPASFVLFLIEERVSKAKHLQFVSGVKPLLYWLANFTWDMLNYAVSAAMVVLIFICFQQQ
SYVSETNLPALILLLLLYGWSITPLMYPASFLFTVPSTAYVALTSINLFIGINGSIATFV
LELFVDEHLNKVNIILKKVLLIFPHFCLGRGLIDMAKNQAMTDAFQRLGNKQTPDPLQWD
FVGKNLFAMAVEGLIFFIFTILLQYKFFINLQSRPWWKEPQLPPLGPEDEDVARERERVK
SGKAQSDILTMTDLSKVYKAGKMPAVNRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDT
PISHGEAFLNQHSVLTEMAQVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEHSVAK
VAQWGVKKLGLSQYAEQEAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFL
WNCILSVTKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIIL
RLADPKADPDECPANDYMNKYFPTIELKEWHHNVIHYQLPSQACCLARIFDVLANNYEEL
GIVDFSVSQTTLDQVFVSFAKEQTDDDNLANVVIGNGSSQLSLSNRLKAPTVQPQPPITP
PQSKKTQPQPEKSPERSANAGKPKKAKASKAKSNEEKSSIAMSKLPRAEEKVEEVGSSGS
NSSSDRRGSGKSRSKHSAASSSKDASSLFIVGTKSHDSEL
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttttaagcagctctacctcctgctttggaagaatgtcacataccgcagaaga
aacaaggtccagctcatcatcgagctcctctggccactcttcctctttttcatcctcatc
tccgtccgtcattcacaccctccttacaaacaaggccaatgccacttcccaaacaaagcc
ttgccatcagcaggcactttgccctggctccaaggcatcgtctgcaacatcaacaacccc
tgcttccacagcccgacaccaggggagacaccaggacaagctggcaactttgacaactcc
atactgtcacgactgcttgtggatgctcagacgcttctgtcctacagtggaaacagcagc
ttctcaggctttcaggacctgatggatagcgtccggctgctgggagaaagacttggatca
ttaccaacgctccctgttaaagaatgtctgagacccaatgagacattttccaactttctc
cggaccaatggcagcctgtcatctgagactgtggatcagctgatgaacgctcatcttaat
tttcagactactttgactttcacccggataccgctgaaggagatagtgtgcaatgcgagc
atgctggaccagtttctgacggtagaagggcgagcagccaacatgactgatctccagact
cagctatgtgaccttccagctgatgtcctgcaggaagctgagcgtctgttcctctctcag
ctcgaactctccaagttccttacgagagaccgtctgatggccaatgctggagacctgtgg
gtcattagtcagaccataaactccgtttcccaggagctggctgtactccttgatgatttc
tcaaccctcactagctttgcagagatgagcgctgctatagtccttttgagccctgaaaat
cgcacagcgaggccgatggaaagttttagagctttttcgaggattgtatgcggtcaccct
gagtctggtggagaacgtatcccatcgctcaactggtatgaagacaatgacatcaagtct
ttcctgggcagagacggcacagaggacgtggatccggacaccaataactacacaactccg
ttctgtagaaatatgatccaaagcctggaggccaaccctatgtcccgcatcgtgtggaga
ggaattaaacctctgttcatcgggaaacttctttacgcgccagacactcctgtaatacag
aaagtcatgaaagaggtgaacaagactttcgaggacctgcagatactccagggggtgaat
gaagcctggaaggagatgggaccacaaatcaagaactacatgcagacgagtgtagagatt
cagctgctgaaggatttgctgcaacgtccagagattgctgtgatggtaaacatgcgtttg
gcaaacacacgctggactgcttcccagattgcccacttcctgtctacacccccagtagac
actccaagggaatctggtgcaccgtctacctggatggacctctacaacgacctcggcttc
accatcagcactttggcacaaatcactgagtgtttctctttgaacaaactggagggactg
gagacggaggaggatctgattgacagagcgctggagctgttggagaaccggcagttttgg
gcaggtgtggtttttcaactgcccaacacctccttgtttgagctgccgccccatgttgtg
tacaagatccgcatggacatagatgatgtgactcgcaccaacaagatcaaggacaggttt
tgggaccctggtccggctgctgacccattcagtgacatgcgctacatttggggtggcttc
gtctacattcaggacatggttgagggagccatgagcagcatactaactggagttaaacag
actacgggcatatacgtccagcagatgccctacccctgttacgtggatgacgtttttctt
cgagtgctgaaccgctccctgcctctcttcatgacgctggcctggatctactccgtggcc
atgatcatcaaaagtatggtgtacgagaaggaagcccggctgaaggaaaccatgaggatc
atgggtctgagtacagggacactttggctcggctggttcatcagctgcatggttcccttc
ttgatttccgcagtgcttcttattgctctgctcaagtggggtgtcatattgccatacagc
gacccggttgtcgtcttcttcttcctcacggcgtttgccactgccactatcatgcagtgc
ttcctcatcagtactttcttctccaaggcaaacctggctgctgcctgcggaggactcatc
tatttcagcttctatctgccttacgtactgtgcgcaacctggagagactacctcacttct
acacaccgaattgtagccagtttcctatctccagtggcctttggctttggttgcgagtac
ttatctatgtttgaagagcaaggcctgggtctccagtggtacaacctgcaagccagtact
gtggaaggagacaagttcagcttcaccacctccataatgatgctttatttggatgccttt
atctactctattgcagcctggtacattgaagcagtttttcccggtgattacgggatcccc
aggccttggtattttatcttccagctcaactactggggcggagttcctcttgaagcgggg
atgcccatcccgtcagcccccacagaccaggacgaagatcacattgagcctgaaccctct
aatatgaacctgggtgtgaacatcagaaatctggtaaagatctacaagaagggagggaaa
attgctgtcaaccatctcaacctgaagttctacgagggccagatcacctgctttcttggt
cacaatggagctggcaaaaccaccaccatatctgtcctgaccggcctgttcccccccacc
tctgggaccgtgtacatcaagggcatggacatccgctatgacatggacatcatcaggacc
acactgggagtttgtccacagcacaatgtcttgttcgatgcactcacagtggaggagcat
gtgtggttttatgggtgtcttaagggtttgtctgaagaaagggtgaaggctgaacttgac
actttgctggaggatgtcggccttttgcacaaacgccatgaacagaccaaaaacctctct
ggtggcatgcagaggaagctgtctgtggcgatagcatttgttggaggttcaaaagtggtt
gtcctggatgagcccacggctggtgttgacccgtactctcgcagagggatctgggatctg
ctgctcaaataccgcaaagatcggaccatcattctgtccacacattacatggatgaggcc
gagctgttgggcgaccggatcgccatcatctccaaggggaagctgtgctgctgcggatct
ccgctcttcctcaagtctcgcctgggatctggctactacttaactgtggtgaagaaggag
gaaatgaacaccaacactcccagcagctctagtatctgtaccagtaccagctctagcacc
aacaaacttcctcctatggtcaaggacagtgaatcatccttgagtgaagacactggactt
ggaagtgaggagtgcagcccatacctggcagctttgctctccctggtgcagcagcatatc
cctggtgcccggctagtggaggagactagaagagaggccgtgatcaacctgccacagaca
gccgccaaagacagcagcctggccgtcgtcttatctaaactggaccaaaagcttcctgag
ctgggcatcagcagctatggcctgtcagacagcacgctggaggagattttcctgcaagtt
gcggaggaaaccggtgtggacagggaacctgatcctcagggaggatcccctaacacacaa
catccaccggagcaaggaactggagggcaacctgcagaagagcaacctgctgaagagcca
gagacaggacggaaaagacttcgtaaaagagacgctcaggagacggagctgctgagtgga
gatggtcaaggtggggagcctgtgacgggcgtgtggctgatctggcagcagctgagagct
ctctttgtcaagcgctggctttacactcggaggagccgcaggggattcctcgcgcagatt
gttctgcctgctatgttcgtgctcatcgctttgttcttcagcctcattgttcctccattt
gggacttacccttcccttcagttgcagccctggatgtatggagaacagtacacgtttttc
agcaatgatgaccctgggaacccggccacggagaacctactggaagctctgctggaccag
ccaggttttggtactaggtgcatggaaaaggaggaacaggaccacaacacgagccatcaa
tgtgaactggagcggggtggcaggtttcagagaccacaggtatctttctccacctggcag
atgttcagcagaggcaactggagcagagacaatccctctcccgggtgtcagtgcagcaca
gaggacgttctccggatgctccctgactgccccgagggggctggtgggcttcagcctcca
cagatcaagagggcaacaggagacatcctccaaaatctaacaagttataacatttctgat
tacctggtgaagacctaccctcagatcctcaagaaaagcctgaaagccaagaattgggtg
aatgaatttcgatatggtggcttctccctcggcggcaaggcctccacgactgaacctcag
gtcgaacatctccaagactcagttgtggcaattaggacacgttaccgagtcccgcagaac
agttcactggatcatttgctggacaggttgccggagttcctaggaggaatgcacagtgaa
aacaacgtgaaggtgtggttcaacaacaaaggctggcatgcaatggtgtcgtttgttaat
gtaatgcacaacggcatgctgagagcgagtctgccgcccggtccggagaggatgagacat
ggcatcactgtgtacaatcacccactcaacctcaccaaggagcagctcaccgaagtggca
atgatgaccacatcagtggacgttctgatttccatctgcgtgatctttgccatgtccttc
gtgccggccagttttgtccttttcctgattgaggagcgcgtcagtaaagccaaacatctg
cagtttgtcagcggagtcaaaccgcttctctactggctggccaactttacctgggatatg
ctgaactacgccgtctcggctgccatggtggtgctgatcttcatctgcttccagcagcag
tcgtacgtctcggagaccaacctgcccgctcttatcctgctcctcctgctctatgggtgg
tccataactcctctgatgtacccagcatccttccttttcaccgtcccaagcactgcttat
gtggcactgacctccatcaacctcttcatcggcatcaacggcagcatcgccacctttgtc
ctggagctgtttgtggatgagcatctgaacaaggtcaacattatcttgaagaaggtgtta
ttaattttccctcatttctgcttgggacgagggttaatcgacatggctaagaaccaggcc
atgacagacgccttccagagactaggcaacaaacagactccagacccccttcagtgggac
tttgtggggaagaacctgtttgcgatggcagttgaaggtcttattttcttcatcttcacc
atactcctgcagtacaagttcttcatcaacttacaatcgaggccgtggtggaaagagccg
cagctgcctcctcttggtccagaggacgaggacgtggcgagagagcgggagagggtcaaa
agtggcaaagcccaatcagacattctcaccatgacagacctgagcaaggtttataaagcg
ggcaaaatgccagccgtgaatcgtctttgtcttggtattccccgcagcgagtgttttggc
ctgcttggggtgaatggagcaggaaagacgtctacatttcgtatgctgactggagacaca
cccatctcacatggagaggctttcctcaaccagcacagtgtgttgacggagatggcgcaa
gtccaccagctgatgggttactgtccgcagtttgatgccatcagtgacctcctgacgggt
cgggaacatctggagctgtacgcccgcctgcggggggtgccagagcactccgtcgccaag
gtggcacagtggggggtgaagaagctgggactgagccagtatgcagagcaggaggccgga
ggatacagcggaggcaacaagaggaaactctctacagccatctccctcatcggggccccg
cctgttatattcctggatgaaccgaccactggcatggacccaaaagccaaaaggttcctg
tggaactgcatcctcagtgtcaccaaagagggcagagctgtggtcctcacctcccacagt
atggaggagtgtgaggctctctgcaccaggatggccatcatggtcaacggcaggtttcag
tgtctcggatctgtccaacacctgaagaacaggtttggtgatggatacaccatcatcctc
cgtttggcagaccctaaagcggaccccgacgagtgtcccgccaatgactacatgaacaag
tattttcctactattgagctgaaggagtggcaccacaacgtgatccattaccagctgccc
tcacaggcctgctgcctggctcgcatctttgatgtgctggccaacaactacgaggagctg
ggcatcgtggacttctctgtctcacagaccaccctggaccaggtgtttgtcagctttgca
aaggaacagacggatgatgacaacctcgcaaatgtagtcattggcaacgggtcatcgcaa
ctaagcttatccaaccgactgaaggcccccaccgtccaaccgcagccgccaattacgcct
cctcagagcaagaaaactcaacctcagcctgaaaaatcccccgagcgcagtgcaaacgca
ggtaaacccaaaaaggccaaagccagcaaggccaagtccaacgaagaaaaaagcagcatt
gctatgagcaagttaccacgggcagaagagaaggtggaggaggtgggcagcagcggctca
aacagcagcagcgatcggagggggtccggtaaatcgagatccaaacacagcgcggcaagt
tccagcaaagatgcctcttcgctcttcatagtcggcactaagtcacatgacagcgagctg
tga
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integrated database retrieval system
