Cololabis saira (Pacific saury): 133458572
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Entry
133458572 CDS
T09849
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133458572 (hps3)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
133458572 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
133458572
NCBI-ProteinID:
XP_061594594
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All DBs
Position
13:29925054..29947051
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AA seq
1069 aa
AA seq
DB search
MVHIYNCHPFASQQIVQVEQEPGLVCCGGGALFVVATGGCKVEVYSLEKEGCPLICRFAT
MGTVRRIQHSKIGDYLVTIEEKNSATYLRAYTNWRYQAEEKARVGVRLLGHLLRGASVWG
GVQMEIIEIPLSERPLAVACCSITGDLLVGCENTLVLFTLRRQNEQNLQNQSQQNLQSSW
PNAQQSCSQSQAGQTSSSNQHLSVLDFERSVILHLPKMTPKQVALCGEYVAVHAELEVLV
LKLEATSEPQPVEESSDASKRADYLQDPIDFLLIPRHQELLGDLAKDCDIPVSIEKTGLE
ERGQYTLSYVLFRRFSPEFFQGCCVEEMQLHSLQLYPLFTSNQSVSSGEPACVFCFFSLP
SAGYLYSLKGGVELLSAYQYPEKVLQAVLTDHLLHVITKSAVQCFTVRCAAVAARVEDPY
IDTTMKACPPCTLDVCALRMQLFIGLRSVCVYGRHVILLSTADTEAPEEPERPTQRRGLD
LKEHNVLTGIFLAVGIDPATSPALESLLSRPFLSRKWTISSPKETSAAGHGWNLYVINSV
SPFTLYKEMVEYSERFAQLHPQAHSLRHLLSEAHLLIRASLLQTAVQQQSVDVDPAALAD
ENQTAQMERQEIEEAFRKNCAQLGDCFSRGSPKDCHLALPYYRMSGLSVTEVMSRNRPLP
DSPHSYGPGFLFYLKHYLLEETEHTLSQEAADDIIHIFSQSEPSLLVSVCASPCMIKVSP
TRTLQILQRLEESAGVSVPLTITMAIMMLHQGDIPQFTELMERHAEMLMVYGFIEEPRLL
VLHGGARDQHTLVHPTALAQQLAHSQPGLLVAGMVALHENSKVQLEQADHIFKELGCETS
LQVDFWEATLIASSQDAVIQELLFRLASVYIDRLTNSAGDKTPKRKSLKSADDLINSSSH
YGALYPWLTVLNPVHFTSSQHQEALHKLQSLLCGPSFSVGSVVPLMERLSDEPLWGFSLH
LLCATRKGQYDRSIEQLLDRCPQAIIAYANHQLQDKYMALWWQKLLPELCNRTRVAAENS
ILLGALKETLVVVAMETSPAEFLELIPDDGTASYFLPHLLTCSQRHLLA
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacatctataactgccatccttttgcctcccagcaaattgtacaggtggagcag
gaaccaggactggtctgctgtggaggtggggccctgttcgtggtggcaactggaggatgc
aaggtggaggtctacagtcttgaaaaggagggctgccctcttatctgtcgctttgccacc
atgggcacggtgagacgcatccagcacagcaaaataggagactacctggtaaccatcgaa
gaaaagaacagcgccacctacctgagagcctacaccaactggcgttatcaggcggaggag
aaagcccgcgtcggggtgcgtttgctgggccacctgctgcgcggggcatcggtgtgggga
ggagtgcagatggagatcatcgagatcccgctctcagagcgtcctctcgctgtggcgtgc
tgctccataacaggagaccttctggtcggctgtgaaaacacgctggttctgttcactttg
aggagacagaacgagcagaacttgcagaaccagagtcagcagaacctccagagctcatgg
ccaaatgctcagcagagctgcagtcagagtcaagcaggtcaaacttcaagttcaaatcag
cacttgtccgttttagattttgagcgctcagtcatcctgcatcttccaaaaatgactcct
aaacaggtggctctgtgtggagaatatgtggcggtgcatgctgagctggaagttttggta
ctgaaactggaggcaacctccgagcctcaacctgtggaggagtcatcagacgcaagtaaa
agagcagattatctacaagatccgattgactttctgctcatcccgagacaccaagagctg
ctcggtgatctagctaaagactgtgacatccctgtcagcattgaaaagaccgggctggag
gagagaggacagtacacgctctcctacgtccttttcagacgcttttctccagaattcttc
cagggttgctgcgtggaggagatgcagctccactcgttgcagctttatccactgttcacc
agtaaccagtcggtgtcttcgggggaaccagcctgcgtgttctgcttcttctctctgccc
agcgccggctacctgtacagtctgaagggcggggtggagctgctctcggcctaccagtac
cccgagaaagtcctgcaggcggtgctcactgatcacctgctacatgtcataacaaagagc
gcggtgcagtgtttcacagtgcgttgtgcagcagtagcagccagggtggaagacccttac
atcgacaccaccatgaaggcatgtccaccttgcactctggacgtgtgtgcactcagaatg
cagttatttatcggtctgcggtcagtgtgtgtctacggccgccatgtgatcctgctctcg
acagctgacacagaggcaccggaggagcctgaacgccccacacagcgccggggcctcgat
ttgaaagaacacaacgtgctgactggtattttcctagcggtgggaatcgatcccgcaacc
tcgccagcactggagagccttctgtcacgccccttcctgagcaggaagtggacgatctcc
tctcccaaagaaaccagtgcagctgggcatggatggaacctttacgtcatcaacagcgtt
tctcccttcactctctacaaggagatggttgagtacagtgagcgcttcgcacagttgcac
ccccaagcccacagccttcgacacctcctcagtgaagctcacctcctcatccgcgcctcc
ttgctgcaaacggcagtgcagcaacagagcgtcgacgtcgaccctgcagcgctggctgat
gaaaaccaaacagcgcagatggaaagacaggagatagaggaggcgttcagaaagaactgt
gctcaactgggtgactgttttagcaggggaagtccgaaggactgccacctggcactgccg
tactacaggatgtccggcttgtcagtcaccgaggtcatgtccaggaaccgcccacttcca
gacagccctcactcctacggccctggcttcctgttttacctcaagcattacctgttagag
gaaacagagcacacccttagccaggaagcagctgatgacatcatccacattttcagccaa
tctgagccctccctgctcgtcagcgtgtgtgccagtccgtgtatgataaaagtcagccct
accagaactctgcagatcctgcagcgtctcgaagaatcagccggggtctcagttcctctc
acaatcaccatggcaatcatgatgctgcatcagggcgacataccgcagttcacggagctg
atggagcgacacgctgagatgctgatggtgtacgggttcatcgaggagccgaggctgctg
gtgcttcatggtggagcacgcgaccagcacacactggtccatcccacagcgctggctcag
cagctggctcactcgcagcccgggctgctggtggctggcatggtggcgttacacgagaac
agcaaggttcagctggaacaggccgatcacatcttcaaagagctgggctgtgagaccagc
ttacaggtggatttctgggaggcgacgctcatagcctcctcgcaggatgccgtcattcag
gagctgctgttccgcctggcgtcggtttacatcgatcgactgacaaactccgccggtgac
aaaacaccgaaacgcaagtcgctgaagagcgcagacgatctgatcaattcaagctctcat
tacggcgctctgtacccgtggctcactgttctcaacccggttcactttaccagctcccaa
caccaggaagctctacacaaactccagtctctgctgtgtggtccttctttctccgtcggc
tccgtcgtgcctttgatggaacgcctgtcagacgaacccttgtggggtttcagcctgcac
ctcctctgcgccaccagaaaggggcagtatgaccgaagtatcgagcagctgttggacaga
tgtccccaggccatcatcgcctacgccaaccaccagttacaggacaagtatatggcactc
tggtggcagaaacttcttcctgagctctgcaaccggacgagagtagccgcagaaaacagc
atcctgctgggtgctctcaaagaaactctggtcgtggttgccatggagacgagcccagca
gagttcttggagctcatccctgacgatggcactgcgtcgtactttctgcctcacctgttg
acgtgcagccagagacacttgctggcctga
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