Cololabis saira (Pacific saury): 133458592
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Entry
133458592 CDS
T09849
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133458592 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
133458592 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_1
LRR_LRWD1
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_5
LRR_EndoS
LRR_Zer-1
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
133458592
NCBI-ProteinID:
XP_061594627
LinkDB
All DBs
Position
13:complement(31378094..31495777)
Genome browser
AA seq
1628 aa
AA seq
DB search
MDNYSTLPLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKGLSVVEASVNPITKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLTQLERLDLGSNEFSDMPEVLEQIHNLKELWLDNNSLQSIPGSIG
KLRQLRYMDLAKNRIETLDTDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQ
LTSLPHTIGSPKPKQGLSLLEELDCSCNELESLPPTVGYLISLRTFAADENFLAELPREI
GNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQKVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAF
DFEDKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQSLVGKSIHAGHGHQHQLSTG
TVTSAGGNMEHTHLSKEPYEPPWPLPPKEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVL
LGKDKKESTDEDVDKLHCLNHSGSSATYSDYSPSQGSSGSSNPPANTHSHLHQHNPALPA
PNKDQAPQSHWTNRLAQSFPKPIDSKPLLSQRETPPSGTLQQRGDRRPLSEPFDWSEAPH
YDNTGFDAEESPLDPPSSNTSQGNPPLGSKPRSQSTHGRRPLLRQERIVGVPLELDTQTL
PYHGNQRSAPDNDPQSGPSSQNPWQNWTRTPSPLEDRTAFPSKLDLTPSSSPNPDRKDID
PRLEQNSGPLPGSWTYHDSQGEQNRKDQLSVGGGNKVTVVMSKNSDRLSPMMKETRSKFK
KSQSIDEIDIGSYKVYSIPMESYSSSIEQQTSLDRQDLPGSMEQTSMARSQSAPMLDDEL
GFPGHGNHNQSGQNQKPAIPHKAYHFDQNYNPQQVTMDRRVPPPFPNTPDYVNHSSKALD
YLNQPGKTLPKELVSPRYRAYPPLEMFSFPQSPISPDGPPSQQQQPMPSQRSRPGFLRRA
DSLVSSTELALFRRVHEAQQEALQESQYRQQVDPPHYGRPLAYSAMEHAAITNMADNQMM
HNKRNGRYDDDYPTYQDQKKTMIGYPTKSLTQRRPLSARSYSTETYGASQWMEPKGIGFL
PNLEKKNPTHDSCKARPVSARPTMAALLEKMPPDYTLATCPEKPSEDTIKVRPVVPQKPE
DITSKMPADWRQQLLRHIEAKRLDRSGVLKHNTLTLGMLCQGGGHGQGRSSTLNFNLYNN
TKHEPPAGRWLPLPPPPSANATPSQQAAMDNDQEGVSGSNHWTPYSLGRRDVPPDNLMKK
GGHSHNPSHQSHNTMIVTSSNAATPHRVIGQQGYDGMMNKGGQYQQGMSLSLVSSGGPGQ
YQGNMSQAIPSPGQAYPSSGHPMALSPSGNQTQYNPHTSHQPPLPATNPQYHGNQGMVHS
NQVVMTTHTNPRPQSARCLLQTKGQKSTDGFQEQLCVRIEKNPGLGFSISGGISGQGNPF
KPSDMGIFVTRVQHDGPAASALQPGDKILQANGHNFLHMEHETAVSLLKSFRRTVDMVVL
RDSSTRQK
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggataactattccactttaccacttcagtgtctggagatgaccactaaacggaagctc
attggccggctggtgccgtgccgttgtttccgtggtgaagaggaagtgatctccgtgttg
gactactcccactgcagcctgcagcaggtccccaaagaaatcttcagcttcgagagaact
ctggaggagctctacctggacgccaaccagattgaggagctaccgaagcaactcttcaac
tgccaggccctgaagaagctgagcatgcctgataatgacctgtccaacctgcctaccacc
atcgccagcctggttaacctcaaggagttagacatcagtaaaaatggaatccaggagttt
ccagacaatatcaaatgctgtaaaggcctgtctgtggtagaagccagcgtcaaccccatc
accaaactccccgaaggttttacacagctcctgaatctgacccagctctttttaaacgat
gccttcctggagtatctgcccgctaactttggcagactctccaaactacggatcctggag
ctgagggagaaccacttaaaaaccatgccaaagtccattcacagactgacacagctggag
aggttggatctgggtagcaatgagttctctgacatgccagaagtgttggaacagatacac
aacttgaaggagctgtggctggataacaactctctacagtcgataccagggtctataggg
aagcttcgtcagttgcggtacatggacctggctaagaatcgtattgagacattagatacg
gatatttcaggctgcgaggccttagaggacctactgttatcctccaacatgctgcagcac
ctccctgactctataggaatgttaaagaagctcaccacactgaaggtagatgacaaccag
ctgacctcactgcctcacaccattgggagcccgaagcccaagcagggtctgtctctgctg
gaggagttggactgcagttgtaatgagctggagtcgttgcctccgaccgtcggctacctg
atcagcctgaggacctttgctgctgacgagaacttcctcgcagagctgcctcgggagatt
ggtaattgcaagaacgtgacggtgatgtcactgcggtccaacaagctggagttccttcct
gacgagatcggacagatgaccaaattgcgtgtccttaatctcagcgacaacaggttaaag
aatctaccatttacatttactaaactaaaggacctggcagctctgtggctctctgacaat
cagtccaaggctctgatcccgctgcagacagaagcccatccagaaaccaaacagaaggtt
ttgaccaactacatgtttcctcagcagccgcgacacgatgaggattaccagtcggacagt
gacagctttaatcctactctgtgggaagagcagagacagcagaggatgactgtggccttt
gactttgaagacaagaaagaggaagaagacaactctgggaaggtcaaggtggagattaat
ctcaagcgctatccgacaccctatcccgaggacctgaagaacatggtcaagtccgtgcaa
agtcttgtgggtaaaagtatacatgccgggcacgggcaccagcaccagctgagcacgggc
acggtcacctcagcgggaggaaacatggagcatacgcacctcagtaaagagccgtatgaa
ccaccgtggcccctgcctcctaaagaggactcaatgggaggctctcccaacgacatccga
atctctgacatgaggcccacgctggtggagccaccgatgtacaaaccaaaggtggtcctc
cttgggaaggataagaaagagtccacagatgaagacgtggataaactgcactgtctgaac
cacagcggctcctcagccacctactctgactactccccctcacaaggctcctcgggctcc
tccaacccaccggccaacacgcactctcacttacaccaacacaacccggccctgccggcc
cccaacaaggaccaggctcctcagagccactggaccaacagacttgcccagtcattccca
aagcctattgactccaaacccctcctgtctcaaagagaaacccctccgtcaggaaccctg
cagcagcgcggagaccggcgcccactcagcgaaccgtttgactggtctgaggcccctcac
tatgacaacacaggttttgatgccgaggagtctcccctggaccctccgtcatccaacacc
agccagggaaatccaccgctgggttccaaaccgcggagccagtcgacacacggccgccgc
ccgctcctcaggcaagagcggattgtaggagtgcccttggagctggacacccagacgctt
ccctaccacggcaaccaacgctccgccccggacaatgacccacaatctggaccttcctct
cagaacccctggcagaactggaccaggacccccagcccactggaagacagaactgctttc
ccctccaagctggacctgacacccagctcaagccccaaccctgaccgcaaggacatagac
ccacgactggaacagaattcggggcctttgccgggaagttggacgtatcacgacagtcag
ggggagcagaacaggaaggaccagctcagtgtcggcgggggcaacaaggtgacggtggtg
atgagtaaaaactccgaccgcctgtcccccatgatgaaggagacgagatccaagtttaag
aagtctcaaagcatagatgagattgacattgggtcctacaaagtgtacagtattcccatg
gagagctacagttcatccattgagcagcagacgagtttggaccgtcaagacctgcccggt
tctatggaacagaccagcatggcgcgatcccagtccgcccccatgttagatgatgagctg
ggcttcccaggacatggcaaccacaaccagtctggacagaaccaaaaacctgccattcca
cacaaggcctatcactttgaccagaactacaacccccagcaggtgaccatggatcgtcgg
gtccctccccccttccctaacacgccagattatgtcaaccactcatcaaaggctttggac
tacttgaatcaaccgggaaagacgcttcccaaggagctagtgagtcctcggtatcgtgcg
tatccaccgctggagatgttttctttcccccagtctccaatcagcccggacggcccgccc
agccagcagcagcagccgatgccgtcgcagcgctccaggccaggcttcctgaggagagca
gattctttggtgagctctacagagctcgctttgtttcgcagagttcatgaagcccagcag
gaagctttgcaggagtctcagtacagacaacaggtggacccccctcattatggtcggcct
cttgcctactcagccatggagcacgctgccatcaccaacatggctgacaaccagatgatg
cacaataagagaaatggtcgctatgacgatgactatcccacttaccaggatcagaaaaag
actatgattggttatccgaccaagagccttactcagcgccgccctctgtcggccaggagc
tacagtactgagacctacggagcatctcagtggatggagccaaaaggcatcggatttctc
ccaaacttggaaaaaaaaaacccaacacatgactcttgcaaggcccgtccagtgtcggct
cgccccaccatggctgcactgttggagaaaatgccacctgactacaccctggcaacttgc
cctgagaagccatctgaagacaccatcaaagtaagacccgtcgtaccgcagaagcccgaa
gacatcacttccaagatgcctgccgactggaggcaacagcttctccggcacatcgaggcc
aagcgactggacaggagtggtgtcctaaagcacaacacgctcacgctgggcatgctctgt
cagggcgggggtcacggccaggggcgcagcagcactttgaactttaacctttacaataac
actaagcatgagccccctgctggccgctggctgccactacctcctcctccgtctgccaac
gctaccccctctcagcaggcagctatggataacgaccaggagggggtgtcagggagcaac
cactggactccctactcactcggcaggagggacgtcccacctgacaacctcatgaagaag
ggtggacattcacacaacccttcccaccagtcacacaacaccatgatcgtcacctcctct
aacgccgctacacctcatcgtgtcatagggcagcagggttatgatgggatgatgaacaaa
ggggggcaataccagcaaggcatgtctctgtcactggtttcttctggtgggccggggcag
taccaaggaaacatgtctcaggcaattccctctcccggccaggcttaccccagcagcggc
catcccatggccctatccccgtctgggaatcaaacccagtacaaccctcacacctcccac
cagccccccctgcctgctaccaacccccagtaccatggcaaccagggcatggtccatagc
aaccaggttgtcatgaccacccacactaacccacggcctcaaagcgctcgctgcctgttg
cagacgaaaggccagaagagcacagacgggttccaggagcagttgtgtgtgagaatagag
aagaaccctggtcttggtttcagtatctctggtggcatcagtggccaggggaaccccttc
aaaccctccgacatgggtatctttgttactagggtacagcatgacgggcccgcagcctcc
gccctgcagcctggagacaagattctgcaggctaatggacataattttttacacatggag
cacgagacagccgtctctctgctgaagagtttccggcggacggtcgacatggtggttctg
agagacagcagcacgcgccagaaatag
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integrated database retrieval system
