Cololabis saira (Pacific saury): 133458646
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Entry
133458646 CDS
T09849
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133458646 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133458646 (rexo1)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
Pre-60S particles
RNases
133458646 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
Motif
Other DBs
NCBI-GeneID:
133458646
NCBI-ProteinID:
XP_061594770
LinkDB
All DBs
Position
13
Genome browser
AA seq
1255 aa
AA seq
DB search
MLRSTGFFRGIDCPFLDDGKGVGNGCNRPHCHFRHSRQRLSSCGAAADSRTPRDLHPGHK
DQGYDPFNPEVVRPQDQQNGKSGDLTGALEMVNKAIEQARCEVEREKKKLSQIGDEQYTP
SERTSSSRPEAAKSKTAAAAAGSHLGYDPGTYQMTSKGYNPAPGCSKYTLDSDNQGNNNN
SMEYIPTSLKKSSARAQLHQQPSPPRSPKYSTSTPSSKCKYTLDNSKPSTDMEYDPLSNY
AAGIAVKSKKDEAHQSVKTKGSVAHKPPGTDRSDLEYVVAVKKPQQTGVNTKKYTISDSD
GESSGTEYRPTSLSNLQQRKANTVSAANAFEKDRRDRAASVLEALKRRSKEMLLPDSDLQ
EGDRQKDNLDKKKAVDQTSHEKRVKHERVHKLENEIKKSSSKTSSKSKEKGLVKSSSQDG
TKKENKSSGKKDDRKDVLKVKTSDKVQREGRDEKRVDGKIKTVEKMKRDLSRQDKDSRES
KKLKTSDREKEREHSKYKEHQLKNGKLDSIRREKDLKKMSKSSSSSSKGSSANSNNKVKQ
NSSNGKRLEDKKQNLSHVDLFGDESPDEAERLEMDYEDEVEEVLVRKSADALKRGRLNKR
KASERTPSSSEDEADNTVDYRTGPAVDDVDFSRFQEDLDFDSDPMEECLRIFNESKDVKW
EDKGRQAKQVQSSRDSEEDKSTESTLTTLFPGQKKRVSHLVAKGNTDAPSKPVARPCKRL
SAQEVCYQRMQMAQQQAAQLSASVKAASLSLSPGFSGEKKRIAHRPNPQTSTFKTSPVDV
RSTTSQALSPSHSLQAVKAQTTAGILSKTSCTTTQKRVAHRPTMKSSSMARPVIPSEFGA
KVPTNVRQRYLNAFIDECLKFCPSEEAAYHTGLDEEKMVYDRSSSKNIYLNVAVNTLKKL
RNKTTSCPPAASKQPGLAAKRRPQSHEEVLGGRLAATTSFTMNRSGKHLEEKLTGATLYR
KLKAYLMTDEQLQEHGYPRMNPEAPGKAVIHNVPEKKAVTDQFAKICCRCGAEYKINVNG
NCVRKEECSFHWGRLRRHKVAGGWETSYNCCSAAVGGPGCQISKQHVQDGRKESLDGFVS
TFDKGLPPDGNGGVFALDCEMCYTKQGLELTRVTVIDSEMKVIYDTFVKPMSKVVDYNTR
FSGVTEEDLENTTITMRDVQAVLLSMFSSESILMGHSLESDLLALKLIHSTVVDTAIVFP
HRLGLPYKRALKNLMADHLKRIIQDNVEGHDSSEDASACMELMMWKIKEDAKVKR
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggtccaccggcttcttccgcgggattgactgcccgtttctcgacgacgggaaa
ggtgttggaaatgggtgtaacagacctcactgtcacttcaggcacagccggcagagactc
tcctcctgcggggctgctgcagacagcaggacccccagagacctccaccccggacacaaa
gatcaaggctacgaccccttcaacccagaagtggtgaggccgcaggatcagcagaatggg
aagtcaggagacctcaccggtgctctggagatggtcaacaaggccatcgagcaggctcgc
tgcgaggtggagagggagaagaagaagctctctcagatcggggatgaacaatacactccc
agcgagagaactagttcgtctcgacctgaagctgcgaaaagtaaaacagcagcagcagca
gctggttcccacttgggctacgatcctgggacttatcagatgacatcaaaaggttacaat
ccggctccaggctgcagcaagtacaccttggattcagacaatcaggggaacaataataac
tcaatggaatatattcctacttcactgaaaaagtcttctgctcgcgcgcaattgcatcaa
caaccctctcctcctcgcagcccaaagtattcgaccagcacaccatcctccaagtgcaaa
tacactctggacaattcaaagccctctacagacatggagtacgaccccctgtccaactac
gctgctggaatcgcagtgaaaagcaagaaggacgaggctcatcaatcagttaagactaag
ggaagtgtggcacacaaaccaccggggaccgataggtcggatttggagtatgttgtggcc
gtgaaaaagccgcagcagacgggtgtaaacacaaaaaagtacaccatctctgactctgac
ggtgagagctctgggacggagtaccggcccacctcgctcagcaacctccagcagaggaaa
gccaacactgtgtcggctgcgaacgcttttgagaaggacaggagagacagggctgcgagt
gtgctcgaggctttgaaacggaggagcaaagagatgttgctaccggactcagacctccag
gaaggcgatagacaaaaagacaacctagacaagaagaaagcggttgatcaaactagtcac
gagaaaagagtgaagcacgagcgagtgcacaaacttgaaaatgaaataaagaaatcctcc
agtaagactagtagtaaaagtaaagagaaagggttggtgaaaagctccagccaggacggc
acaaagaaagagaacaagagtagcgggaagaaagatgacaggaaagatgtgttgaaggtg
aaaacttctgataaagttcagcgggaaggcagagatgaaaagagggttgatggaaagatt
aagacggtggaaaaaatgaaaagagacttgagcagacaagataaagattcaagggaaagc
aaaaaactgaaaacgtcagacagagaaaaagaaagagagcacagcaaatacaaagagcac
caactcaaaaatggtaaacttgacagtattagaagagaaaaagacttaaagaaaatgagt
aagagcagctcgagcagcagtaaaggaagttcggctaacagtaacaataaagtgaagcag
aactcctccaacgggaagagactcgaggacaaaaagcagaatttgagccacgtggatctg
ttcggggacgagagtccagacgaggctgagcgtttggagatggattatgaggacgaggta
gaagaagtcctggtgaggaaatcggccgacgcgttaaagagggggcgtctgaacaagagg
aaggcctcggagcggaccccgtcgtcctcggaggacgaggccgataacaccgtggactac
aggacgggtccggccgtcgacgacgtggatttctccaggtttcaggaggatctggacttt
gattccgatcccatggaggagtgtttgaggatcttcaacgagtccaaagatgtgaagtgg
gaggacaaaggaaggcaggcgaaacaggttcagtcttcgagggattcggaggaggacaaa
agcacagaaagcactttaacaactctcttccctggtcaaaagaagagagtctcccattta
gttgccaaaggaaatactgatgcaccttcaaagcccgtggcccggccttgtaagcggctc
tcggcccaggaggtctgctaccagcggatgcagatggcgcagcagcaagccgctcagctc
tctgcctcggtcaaagccgcctctctgagcctgagccccggcttttccggggagaagaag
aggatagcccaccgtcccaacccgcagacatcgacctttaaaacaagtcctgtggacgtt
agatcgaccaccagtcaggcgttatcccccagtcacagtcttcaggctgtcaaggcccaa
acaacggctggcattctgtccaagacctcctgcacgaccacgcagaaacgggtggcacac
aggcccaccatgaagagctcgtcaatggcgcgtcctgtcatcccctctgagttcggggcc
aaagttcccaccaacgtccgccagcgctacctcaacgctttcatcgacgaatgcctcaag
ttttgcccatcagaggaagcggcctaccatacggggcttgatgaggagaagatggtgtac
gaccgcagtagcagtaagaacatctacctcaacgtagccgtcaacacgctgaagaaactc
cggaacaagaccacctcctgtccgccagccgcctccaagcaacctgggttagcagctaaa
aggagaccacagtcccacgaggaggttctggggggtcgtctcgctgccacgaccagtttc
accatgaacaggtcgggtaaacatctggaggagaagctcaccggagccacgctgtacagg
aagctgaaggcgtacctgatgacggacgagcagctccaggagcacggataccccaggatg
aacccggaggccccgggcaaggccgtcattcacaacgtcccagagaagaaggccgtcacc
gaccaattcgccaagatatgctgtcgatgtggtgcagagtataaaatcaacgtcaatggc
aactgtgtaaggaaagaggaatgcagttttcactgggggcgtttacgcagacataaagtc
gctggaggctgggagacgtcgtacaactgctgctccgctgccgtgggcggtcctgggtgc
caaatttccaagcaacacgtgcaggacgggcgtaaagagtcactagacggctttgtctcg
acgttcgacaaaggtctgccaccggacggaaacgggggagtgtttgctttggactgtgag
atgtgttacacaaaacaaggactggagctgacgagggttacggtgatcgactccgagatg
aaagtcatctacgacacgtttgtgaaacccatgagcaaagtggtcgactacaacacgcgg
ttttcaggtgtgactgaggaagacttggagaacaccaccatcaccatgagagatgttcag
gctgtgctgctcagcatgttcagcagtgaatccatcctcatgggacacagcctggagagc
gatctcctcgctctgaagctcatccacagcacggtagtcgacacggccatcgtgtttcct
caccgcctcggtttgccctacaagcgggctttgaagaacctcatggccgatcacctcaaa
cgcatcatccaggacaatgtggagggccacgactccagtgaagatgcgtctgcctgcatg
gagctgatgatgtggaagattaaggaggatgcaaaggtcaaaagatga
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