Cololabis saira (Pacific saury): 133458680
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Entry
133458680 CDS
T09849
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04217
Necroptosis
csai04622
RIG-I-like receptor signaling pathway
csai04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133458680
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
133458680
04625 C-type lectin receptor signaling pathway
133458680
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133458680
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133458680
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133458680
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C67
133458680
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133458680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
133458680
NCBI-ProteinID:
XP_061594825
LinkDB
All DBs
Position
13:complement(37733025..37755193)
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AA seq
765 aa
AA seq
DB search
MTSAKYLYFILTKKPETLYSSVKAGRICYISEYNHSQSQSRTKLPVFFVGSLSALDYELE
LNCLKELSSEEAKLLLAVPDDADRLIMSRDREALQTALDLTLETVVTVEEDGKRLRGIIR
YIGPLDESRPISGTFFGIELQGADRGKGVTDGKYKFITRFSCEKKCGVFAPFFRIRPVVP
TSLSPPVCDAPTELHTDELCPGDRVTYFVGGECRHGMVVDVQQEGGKHTVRISTDTDETG
KRGGEVFVPLDLVAKGEVPAGFTVMDVDEPPLEPDPGLFMGINSMVEVTLGVPNSYGIIR
WMGTLPERAETMVGLELEDNNGVSDGTFKGKRLFHCPPKRALFVKLSSCRPDSRFQNPDP
SQPVDCSQTPGELDDTERDAGYGEWNPETAPPVSTEQVNQLLIGRMKGIQGHCNSCYMDA
ALFGLFSCSSVLDSMLFKSTGPQDAPIQRTLLHDIVAPLRSKGFVEGRHIMKLRQLLQNL
GYSNSFTTDEKDPEEFLIVIMHHILALDPLLKLSAAGKVQESYCYQIFLDQNHSLVLPTV
QQLLEHSFHSSGLKLAEVPSCLILQMPRFGKKFKMFDKIIPSLELDITALLSEGPQQCML
CGKLAVEECADCFKDPVFSSTGFKIFCSTCSAQVHSHPQRHSHKPAALEIPKGYRGFSVP
RALTRDRLELFAVLCIETSHYVSFVKHGPDSHDWIFFDSMADREGERDGYNIPEVRACPE
VGDYLEMSPAELANQVPRDMRGVAKRLFCDAYMYLYQSTSMCLYR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagcaaagtacctgtacttcatcttgactaaaaagccagagacgctctatagc
tctgtgaaagctgggcgcatctgttacatctctgagtacaaccacagtcagtcccagtcc
cgcaccaagctgccggtcttcttcgtgggctccttgtctgctctggattatgaactggag
ctcaactgcttgaaggagttgagctcagaggaggccaagctgctgctggccgtccccgac
gatgctgacaggctgataatgtccagagacagagaagctctacagacggcgctggacctc
accctggaaactgttgtgactgtggaggaagatgggaagaggctgagaggcattatccgc
tacatcggacccctagatgagtcccgccccataagtgggacattcttcgggatcgaacta
cagggagcagacagagggaagggcgtcaccgacgggaagtataagttcataacccgtttc
tcctgtgagaaaaaatgcggcgtctttgctccgttcttcagaatcaggccagtggtcccc
acctccctgtccccccccgtctgtgacgcccccaccgagctccacacagacgagctgtgt
ccgggagacagagtcacctacttcgtgggaggcgagtgtcgccacgggatggtggtggac
gtgcagcaggagggcgggaagcacacggtccgcatctccaccgacacggatgagacaggg
aagagaggaggagaggtctttgtccccctggacctggttgctaaaggagaggtgcctgca
gggttcaccgtcatggacgtggacgagccgccgttagagccggaccccgggctgttcatg
ggtatcaactccatggtggaggtcacgttgggcgtgcccaactcgtacggcatcatccgc
tggatgggcaccctgccggagcgggccgagaccatggtcgggctggagctggaggacaac
aatggcgtgagcgacggcaccttcaagggcaagcgtctcttccactgtcctcccaagaga
gctctgtttgtgaagcttagctcctgccgtcccgactcgcgcttccagaatcccgaccca
tcacagcccgtcgactgcagccagaccccgggggagctggacgacacggagagggatgcg
ggatacggcgagtggaacccggagacggctcctccggtgagcacagagcaggtcaaccag
ctcctgattggacggatgaagggaatccagggccactgcaactcctgctacatggacgcc
gccctgttcggcttgttctcctgctcgtccgtgttagactccatgctgttcaagtccacc
ggcccccaggacgcccccatccagcggacgctgctccacgacatcgtggcgccgctgcgc
agcaagggcttcgtggagggccggcacatcatgaagctgcgacagctgctgcagaacctg
ggctacagcaactccttcaccaccgacgagaaggatccggaggagttcctgatcgtcatc
atgcaccacatcctggccctggaccccctgctgaaactatcggctgctggtaaagtgcag
gagagctactgctaccagatcttcctggatcagaaccacagcctggttctgcccaccgtc
cagcagctgctggaacattccttccacagctcggggctcaagctggccgaggtgccgtcc
tgcctcatcctccagatgcctcgcttcgggaagaaattcaagatgtttgacaaaatcatt
ccgtccctggagctggacatcaccgccctgctgtcggaggggcctcagcagtgcatgctg
tgtgggaagctggcggtggaggagtgcgccgactgctttaaggaccccgtcttcagctcc
acggggttcaagatcttctgcagcacgtgttcggctcaggtgcactcccacccgcagcgg
cactcccataagcccgctgccctggagatccctaagggctaccggggcttcagcgtcccc
cgcgccctgacccgagaccggctggagctgttcgccgtcctgtgcatcgagaccagccac
tacgtgtccttcgtcaagcacgggcccgacagccacgactggatcttcttcgacagcatg
gccgacagagaaggggagcgggacggctacaacatcccggaggtgcgcgcctgccccgag
gtcggcgactacctggagatgtcgcccgccgagctggccaatcaggtgcccagagacatg
aggggcgtggccaagcggctgttctgcgacgcctacatgtacctgtaccagagcaccagc
atgtgcctctaccgctga
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