Cololabis saira (Pacific saury): 133458725
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Entry
133458725 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133458725
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133458725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NACHT
NLRC4_HD2
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133458725
NCBI-ProteinID:
XP_061594912
LinkDB
All DBs
Position
13:46976533..47014908
Genome browser
AA seq
1165 aa
AA seq
DB search
MDQCEDGEDGVPPSKTSLCGGHESRSDRSIGRSIEFKGDQSSAVKRIHQKGDSLEPEPSC
LSLKSDRSKGFLFDFKNWFMNFKGDQCSPSERVDQQISESPSGPSVQQHQTQLDSVFQLL
EDDIIMFVKDELKKIQRGLSPDYPESLEHVLQGEGEEQRSREAFVKITVNFLRRMKQEEL
AERLQSSTFAEVCEKRLKSKLKEKYQCVSEGIAKAGNPTLLEQIYTELYITEGGTGEVNK
EHEVRQIEAASRKPHRAETAIRQVDIFKLPSGRDEPIRTVMTKGVAGIGKTVLTQKFSLD
WAEGRTNQDIQFLLPFTFRQLNVLREEKFSLLELVHHFFSETKGICSFVDFQVVFIFDGL
DESRLPLDFHNNKDLTDVTESTSVDVLLTNLIRGNLLPSARLWITTRPAAADQIPPECVS
MVTEVRGFTDPQKEEYFRKRFREEEQTRIISHIKTSRSLHIMCHIPVFCWITATVLENVL
ENVLENVLENVLETREGGELPKTLTEMYIHFLVVQAKLKKVKYDGGAGTDPHWSPESRKM
VESLGKLAFEQLQKGNLIFYESDLTECGINIGEASVYSGVFTQIFREESGLYQDQVFCFI
HLSVQEFLAALHVHQTFIKSGVNLLEEEKNTETDLYQTAVDKALQSPNGHLDLFLRFLLG
LKLETNQNLLRGLMEPKQRTSLTFQNLLRGLMTSNQRSSQNNQETVKYIKEKISEDLSAE
RSINLLHCLNELNDGSLVEEVQQSLRSGRLSTDKPSPAQWSALAFILLSSEDLEVFDLKK
FSASEEALRRLLPVVKASKKAKLSDCNLSGNICPLLSSVLSSQSSSLTELDLSNNDLQGS
GLEQLCPGLESPHCHLESLRLSGCNLSGNICPLLSSVLSSQSSSLTELDLSNNDLQDSGL
EQLCPGLESPHCHLESLRLSGCLISEEGSSSLVSALTSNPSHLRELDLSYNHPGKSAGKL
LSRLKDPRWRLDTLRVKPAGQRWLTPGLRKYSCQLTVDTNTVYNNIKLSDNNRKMMLVRE
DQSYPRHPDRFDRWPQLLCREVLTGRCYWEFQSRGGVYVSVSYRRISRKGDSDDCVFGWN
DHSWSLSYSGDGRYRLLHNNRGTPSSSSPSDSDRLAVYVDVPAGTLSFYSVSSDGLIHIH
TFNTTFTEPLYPGFRFWDGCSVSLC
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaagacggagaggacggagtccctccctctaaaacctctctgtgtggg
ggacatgagagtcggagcgaccggtcaatcggcaggtcaattgaatttaaaggagaccaa
agttctgctgtaaagaggatccatcagaaaggagactctcttgaacctgaacccagctgt
ttgtccttgaagagcgaccggtcaaagggctttttatttgactttaagaactggttcatg
aactttaaaggagaccaatgttctccttcagagagagtggaccagcagatctcagagtcc
cccagcggtccgtctgtccagcagcatcagacccagctggactccgtgtttcagctgctg
gaggacgacatcatcatgtttgtgaaggacgagctgaagaagatccagaggggtctgagt
ccagattacccagaatccttagagcatgtgttgcagggtgagggtgaagagcagaggagc
agagaggcgtttgtgaagatcacagtgaacttcctgaggagaatgaagcaggaggagctg
gctgagcgtctgcagagcagtacttttgctgaagtttgtgaaaagcggctgaagtctaag
ctgaaggagaagtaccagtgtgtttctgaggggattgctaaagcaggaaacccaaccctt
ctggagcagatctacacggagctctacatcacagagggagggaccggagaggtcaacaaa
gaacatgaagtcagacagattgaagcagcttccaggaaaccacacagagcagaaacagcc
atcagacaggtagacatctttaaactcccatctggaagagatgaaccaatcagaacagtg
atgacgaagggagtggccggcatcgggaaaacagtcctaacacagaagttcagtctggac
tgggctgaaggcagaaccaatcaggacatccagttcctgcttccattcaccttcagacag
ctgaatgtgctgagagaggagaagttcagcttgctggaactagttcatcacttcttctct
gaaaccaaaggaatctgcagctttgtagacttccaggtcgtgttcatctttgacggtctg
gatgagagtcgacttcctctggacttccacaacaataaggacctgactgatgttacagag
tccacctcagtggacgtgctgctgacaaacctcatcagggggaacctgcttccttctgct
cgtctctggatcaccacacgacccgcagcagccgatcagatccctcctgagtgtgtctcc
atggtgacggaggtcagagggttcactgacccacagaaggaggaatacttcaggaagagg
ttcagagaagaggagcagaccaggatcatctcccacatcaagacatcacggagcctccac
atcatgtgccacatcccagtcttctgctggatcactgctacggtcctggagaacgtcctg
gagaacgtcctggagaacgtcctggagaacgtcctggaaaccagagagggaggggagctg
cccaagaccctgactgagatgtacatccacttcctggtggtccaggccaaactgaagaag
gtcaagtatgacggaggagctgggacggatccacactggagtccagagagcaggaagatg
gtggagtctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctat
gaatcagacctgacagagtgtggcatcaatattggagaggcttcagtgtactcaggagtg
ttcacccagatctttagagaggagagcggcctgtaccaggaccaggtcttctgcttcatc
catctgagtgtccaggagtttctggctgctcttcatgtccatcagaccttcatcaagtct
ggagtcaacctgctggaggaagagaagaacacagagactgacctctatcagacagctgtg
gacaaggccttacagagtcccaacggacacctggacttgttcctgcgcttcctcctgggt
ctcaaactggagaccaatcagaacctcctacgaggtctgatggaaccaaaacaaagaact
tccctgacctttcagaacctcctacgaggtctgatgacatcaaaccaaaggagttcacag
aacaatcaggaaacagttaaatacatcaaggagaagatcagtgaggatctgtctgcagag
agaagcatcaacctgctccactgtctgaatgaactgaacgatggttctctggtggaggag
gtccaacagtccctgaggtctggacgtctctccacagataaaccgtctcctgctcagtgg
tcggctctggccttcatcttactgtcatcagaagatctggaggtgtttgacctgaagaag
ttctcagcttcagaggaggctctacggaggctgctgccggtggtcaaagcctccaagaaa
gctaagttgagtgactgtaacctctcagggaacatctgtccacttctgtcctcagttctc
agctctcagtcctccagtctgacagaactggacctgagcaacaacgacctgcagggttct
ggcctggagcagctgtgtcctggactggagagtccacactgtcacctggagtctctcagg
ttgagtggctgtaacctctcagggaacatctgtccacttctgtcctcagttctcagctct
cagtcctccagtctgacagaactggacctgagcaacaacgacctgcaggattctggactg
gagcagctgtgtcctggactggagagtccacactgtcacctggagtctctcaggctgtca
ggctgtctgatctcagaggaaggaagttcttctctggtctcagctctgacctccaatccc
tcccacctgagagagctggacctgagctacaaccatccaggaaagtcagcagggaagctt
ctgtctagactgaaggatccccgctggagactggacactctcagggtgaagcctgctgga
caacgatggctgacaccaggtctgaggaagtattcctgtcaactcaccgtcgacacaaac
acagtgtacaacaacatcaaactgtctgacaacaacaggaagatgatgttggtgagggag
gatcagtcgtatcctcgtcatccagacaggtttgatcgctggcctcagctgctgtgtaga
gaagttctgacgggtcgctgttactgggagttccagagtagaggaggagtttatgtatca
gtgagttacagaagaatcagcaggaaaggagactctgatgactgtgtgtttggatggaac
gatcattcctggagtctgtcctattctggtgacggtcggtaccggctccttcacaataac
agaggaacaccttcctcctcctctccctcagactctgacagactagcagtgtacgtggac
gttcctgctggaactctgtccttctacagcgtctcctctgacggactgatccacatccac
accttcaacaccacattcactgaacctctctatcctgggttcaggttctgggatggttgt
tcagtgtctctgtgttga
DBGET
integrated database retrieval system
