Cololabis saira (Pacific saury): 133458742
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Entry
133458742 CDS
T09849
Symbol
grin3bb
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04020
Calcium signaling pathway
csai04080
Neuroactive ligand-receptor interaction
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133458742 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133458742 (grin3bb)
04082 Neuroactive ligand signaling
133458742 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133458742 (grin3bb)
Ion channels [BR:
csai04040
]
Ligand-gated channels
Glutamate (ionotropic)
133458742 (grin3bb)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
133458742
NCBI-ProteinID:
XP_061594928
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Position
13:complement(6784379..6843111)
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AA seq
1164 aa
AA seq
DB search
MGVDKGMVLRAEPAVLLLLLLAPPCRPHPEPCLLLAQTGHAVRVGVLLPAQRETRTHVQV
ALDRIRATLNQDRERDRDQGQAWDKVNFLPYNLSLELVTRQLAATDPDSLVRCVCERVLV
QMVSAVLAFPRSREELLQLDLLASALEVPVLSIIEHEEPLQTQSQFHLQMVTGVPESAVS
NLLLAVLQRSGWREVTAVLCPGWEEAHGLLQLLDSVSGASWHLRALLDLTQLAHDDTQIH
DFLSRYFKQNRPPPAAVLLFGEDPQCAATVLRSAHDLGLTSPTVQWVLGQPLCPDLLHIF
GLPLGLLAFGEVQRKPLDFYIRDALQLITRAIAAATMVKPDLALIQKTVNCYDKPNRPTE
PSSGRYLSRFLFNVSFSGLTGPVRVHQNWSWVVTWQRFHIWSLRRDALGQPTWVTVGSWE
GGQLQVEDQGVWHGPKLRQRMDDMSRRVKGRWRVGLPVAGSRVRVVTLVEHPFVFTRDVD
VDGICPAGQLCLDAGTNNSETLERYFREVAGKNSSSLPLENRKCCYGYCIDLLEKLAEDL
GFKFDLYIVGDGKYGTSKGGRWTGLVGDLLSGLADMAITSFSINSARSRVIDFTSPFFST
SLGILVRSKDTAAPIGAFMWPLHWSMWVGIFLALHITALFLTLYEWKSPFGMTPHGRNRV
RVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFVMNLWAIFCLLVLSSYTANLAAVMVGE
KTFEELSGIHDTKLQHPWRGFRFGTVRESSAEDYMKKSFPEMHDYTRRFNVPTTPEGIAA
LKMDPSELDAFIMDKALLDYEVSIDADCKLATVGKPFAIEGYGIGLPQNSPLNSNMSEII
SRYKSDGFMDLLHDKWYKVVPCGNRVYAVTETLQMGVHHFSGLFILLCFGVGGALLTLAG
EHGFYRLVLPHIRRRQKLKYWLHTSQKIHRALNMTCEDVKKQKSCNLEKTQVPLDPQGPL
EALGSGSSDRRNNDGNKTSADGKDFKRVHFQLETLNTRRLLARITVCDAEENGAKAGDGG
AANVRTERDNNLCENGGPANLLSGLLSRLPSSSSSSVCSPAAETTHPAVPAPPPAAAAPP
WPGELQELQEQIEEMRDKLRGALARRAEIQNSLDKSITMTVPPAPLRTVSPATPLPPNTK
NVTTMTAPLQHKVLSKVRLANQRR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggataagggcatggttctgagggcggagccggcggttctcctgctgctcctc
ctcgcccccccgtgccgcccccaccccgagccgtgtctcctcctggctcagaccggacac
gcggtgcgcgtgggagtcctgctgccggcgcagcgggagacacgcacacatgtgcaggtg
gcactggaccgcatcagagccacgctgaaccaggaccgggagcgggaccgggaccagggc
caggcctgggacaaggtgaacttcctgccctacaacctgagcctggagctggtgacccgg
cagctggccgccacagacccggactccctggtccggtgcgtgtgtgagcgggtgctggtc
cagatggtgtcggccgtgctggcgttcccgcggagccgggaagaactgctgcagctggac
ctgctggcctcggccctggaggtcccggtcctcagcatcatcgagcacgaggagccgctg
caaacacagagtcagtttcacctgcagatggtaacgggggttcctgagtcggccgtgtcc
aacctgctcttggcggttctgcaacggtccggttggagggaggtcactgcggttctgtgt
ccgggctgggaggaggcccacggtctgctgcaactcctggacagtgtgagtggagcctcc
tggcacctgcgggctctactggacttgacgcagttggcccatgatgacacgcagatccat
gacttcctgtcccgatacttcaaacagaaccggcccccaccggcagcggtgcttctgttt
ggggaggacccgcagtgcgccgctacggtgctgcgcagcgcccatgacctgggcctgaca
tcccctacggtgcagtgggtgctgggccagccgctctgccccgacctgctgcacatcttc
gggcttccgcttggcctgctggccttcggggaggtgcagcggaaacctctggacttctac
attagagatgccctacaactcatcaccagggccatcgctgcggcaaccatggtgaagccg
gacctggctttgatccagaagacggtgaactgctacgacaaaccaaacagacccacagag
ccatcatcaggacgctacctgtccaggtttctgttcaatgtgtctttctctggactcacg
ggccccgtccgggtccaccaaaactggtcttgggtcgtgacctggcagcggttccacatc
tggagcttgcggcgggatgcactgggtcagcccacctgggtgacggttggcagttgggaa
gggggtcagctgcaggtggaggaccagggggtgtggcacggaccaaagctccggcaaagg
atggacgatatgagcagaagggtcaagggacgctggagggtgggtttgccggttgcagga
agtcgggtcagagtggtgaccctggtggaacatcccttcgtgttcacacgggatgtggat
gtcgacggcatctgccccgccggacagttgtgcctggacgctggaaccaacaactcagag
actctggagcggtacttcagggaggtggcagggaagaacagcagttccctgcctctggag
aacaggaaatgttgctatggatactgcatcgacctgctggagaagctggccgaggacctc
ggcttcaagttcgacctttacatcgttggagatggaaagtatggcacgtcgaaggggggc
cgctggacggggctggtgggggatctcctgagtggtctggcagacatggccattacctca
ttcagcatcaactctgcccgcagccgagtgattgacttcacctcacctttcttctccact
agtctgggcatcctagtgcgtagtaaggacacagcagcccccattggggccttcatgtgg
cccctgcactggtccatgtgggtgggcatcttcctggcactacacatcacagcactcttt
ctgaccctttacgagtggaagagtccattcggtatgacgcctcacggtcggaacagagtg
agggtgttttcatactcgtcagctctcaacctgtgctatgcaatcctgtttggacgcacc
gtctcctccaagacaccgaagtgctggactggccgcttcgtgatgaacctgtgggccatc
ttttgcctcttggtgctgtccagctacactgccaaccttgcagctgtgatggtgggcgag
aagacgtttgaggagttatcagggatccacgacaccaagctgcagcatccatggcgggga
tttcgttttgggacggtgagagagagcagcgctgaggactacatgaagaagagttttcca
gagatgcatgactacaccaggcgcttcaatgtcccgaccacccctgaagggatcgccgcc
ctcaagatggatccttctgagctggatgccttcatcatggataaagcgctcctggattac
gaagtctccatcgacgccgactgtaagcttgcgactgttgggaagccgtttgccattgaa
ggttacggtattggcctacctcagaactctcctctgaactccaacatgtcggagatcatc
agcagatacaagtcagatggattcatggaccttctgcatgacaagtggtacaaggtggtt
ccatgtggaaaccgagtttacgccgtcacagagactctccagatgggcgtccaccacttc
tcaggacttttcatattgttgtgcttcggtgtgggtggagctcttctgactctagcaggt
gaacatggtttttaccgactcgttttgccacacatccgccgccgacaaaagctgaagtac
tggctgcacacctcacagaaaatccaccgagctctgaacatgacgtgtgaagatgtgaag
aagcagaagagctgtaacctggagaagacccaggtccctctggacccccaggggcccctg
gaggccctgggctctggatcttcagacaggagaaacaatgacggcaataagacctctgca
gatggcaaagacttcaaacgagtgcacttccaactggagaccctcaacacccgccgactg
ctcgctcgcatcacggtgtgtgatgctgaggagaatggggctaaggctggggacggaggg
gcagctaatgtgaggacggaacgtgacaacaacctctgcgagaatggaggacctgcaaac
ttgttatctggtcttctgtcacgcctcccttcctcgtcgtcctcctccgtctgctcccct
gctgctgaaactacgcaccctgccgtacctgcccccccccctgctgccgcggccccaccc
tggcccggagaactccaggagctgcaggaacagatcgaagagatgagggacaaactgagg
ggagctttggccaggagagctgagatccagaacagcctggacaaatctataactatgact
gtcccgcccgcccctttacgcaccgtctcaccagcaacacccctccctcccaacaccaag
aatgtgaccactatgacggcccccctgcaacacaaagtcctgtccaaggtccggctggcc
aatcagagaaggtga
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