Cololabis saira (Pacific saury): 133459247
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Entry
133459247 CDS
T09849
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1 isoform X1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133459247 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
133459247 (lrwd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
WD40
Beta-prop_EML_2
LRR_8
LRR_4
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_SPT8
WD40_Prp19
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
133459247
NCBI-ProteinID:
XP_061595102
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All DBs
Position
14:complement(30751362..30767846)
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AA seq
738 aa
AA seq
DB search
MEKITEKLLLDKSSPKTSKLEQIKTLNLSKMKLQLQDLPVPLLSRLRSLEEWDLSGNALK
EFPANLDLPALRHLDLSDNLMEDVTSLESLKSLEELKMDNNLYITVSDNHKLMVLLPNLR
MYNGKDVSTAANHLRFVYSDNLRTRVKVLWERSFSLPDPITAQKMSDLERNFAAAAGQQV
KYGPSSVSDFTKWRVEILAREYLRSLTEPTEPTEPTEPDNKDSADANNIVSTPSKRKRSE
PVDVRLTPHKKPRTDLPASPSEGSPRKLNLRVKLPTVTSTRMSPYKTSKDPSSTGETKRE
TPRRTSQAQRAKNDEAEQKESVKASKPKRDLHTLPIIKTWRKTQQPVSLKPLHVLQCHSK
RDSSDDFSTQLWACAFQPPEDCSGGGGGSRMVATCGGDSVCVIDCETGMVMKKYNVPEEE
FFSLAWSTVLMSRGAKASAQLCSILAAGGKRGLVKLIHPRNNVAYGEFRASRKPLSVLRF
NQRRGNFLFTGSYDHKIVMWDIGGVDIQYNYKVVQLLVLEMSNTPLHICMPPTSPDTHLL
AACEDGLNCFNTQLSASNTSRSRQKDLEVTFPIYKKQDEEHDYRTVDGLNFLNDDIVASK
NVLHGFIYLWSWSRTRTQRPDKKSRTVSAVVLAELQWTNTETPYLALGTCPGRAYVVCGD
DKGRIWTYHVSNLQKSSLNDGKPVPPTEVLDWPAPVRKGLSRLEGPSINSVAMDPELQYL
VALSDKNMVIIWRRGDES
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaataacagagaaactcttactggacaaaagttccccaaaaaccagcaagttg
gagcaaataaagacactcaacctctccaagatgaagctgcagcttcaggacctgccggtc
ccgctcctgtcccgtctccggtccctggaggagtgggatctgtctgggaatgctctgaag
gaattccctgcgaacctggatctgcctgcgcttcggcacctggacctcagcgacaacctg
atggaggacgtcaccagcctggagtccctgaagagtctggaagagctcaagatggacaac
aacctttacatcaccgtgagcgacaaccacaagctaatggtgctgctgcccaacctgcgg
atgtacaacggtaaagacgtcagcacggccgccaaccacctgcgcttcgtctacagcgac
aacctgaggaccagggtaaaggtgctttgggagcggagcttcagtcttccagatcccatc
acggcccagaagatgtccgacctggagcgaaactttgcggccgcagctggacagcaggtt
aagtatgggcccagctccgtcagcgacttcaccaagtggagggtggagattctggccaga
gagtatctgcgatcgctgacggagccgacagaaccaacggaaccaacggagccggacaac
aaagactctgccgacgcaaataatatcgtctcaacgccatccaagaggaagagaagtgaa
ccggtggacgtgcgtttgactcctcacaagaagcctcgtactgatctccccgcctctcca
tctgaaggaagccctcgcaaactcaacctccgtgtgaagcttccgactgtgaccagcacc
aggatgagcccgtacaagaccagtaaagacccctctagtacaggagagacgaagagagag
acgcccaggaggacatcgcaagcccaaagggccaaaaacgatgaggcagaacagaaggaa
tccgtcaaggcctcgaagcccaagagagaccttcacacgctgcctataataaagacttgg
agaaagacacagcagccggtgtctctgaagccgctccacgtgctgcagtgtcacagtaaa
cgggacagctcggacgacttctccacccagctgtgggcctgcgccttccagcccccggag
gactgctcaggcggtggcggaggaagccgcatggtggctacgtgtggaggagactccgtc
tgcgtgatcgactgtgaaaccgggatggtgatgaagaagtacaacgttcctgaagaggag
ttcttctccctggcctggtccaccgtgctgatgtccagaggagccaaggcctcggctcag
ctctgcagcatcctcgccgccggcgggaagagaggactcgtcaagctgatccaccccagg
aacaacgtggcctacggcgagttcagggccagccgaaagcccctgtctgtcctgcgcttc
aaccagcggcgaggaaacttcctcttcacgggatcgtatgaccacaagatagtgatgtgg
gacatcggtggagtggacatccagtacaactacaaagtcgttcagctgctggtgttggag
atgagcaacacgcctctgcacatctgcatgccgccgacttctcctgacacacacctgctg
gcggcctgtgaagacggcctgaactgcttcaacacgcaactgagcgccagcaacaccagc
aggagcaggcagaaagacctggaggtgacgttccccatttacaagaagcaggacgaggag
cacgactaccgcaccgttgacggcttgaattttctcaacgatgacatcgtggcctccaag
aacgtcctgcacggtttcatttacttgtggagttggagcaggaccaggacgcagcggccc
gacaagaagagcaggacggtgtcggctgtggttctggccgagctgcagtggaccaacacc
gagactccttacctggctctcggcacctgtcccggacgggcctacgtcgtctgtggagac
gacaaaggcaggatatggacgtaccacgtcagcaacctgcagaaatccagtttgaacgat
gggaaaccagtcccgcccactgaggttctggactggccggcccccgtgaggaagggcctg
agccggctggagggcccctccatcaacagcgtagccatggaccccgagctccagtacctg
gtggctctcagtgacaagaacatggtgataatatggaggagaggcgacgagtcctga
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