Cololabis saira (Pacific saury): 133459331
Help
Entry
133459331 CDS
T09849
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133459331 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133459331 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133459331 (vps36)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
133459331 (vps36)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133459331 (vps36)
Exosomal proteins of colorectal cancer cells
133459331 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
BBL5
TssO
Motif
Other DBs
NCBI-GeneID:
133459331
NCBI-ProteinID:
XP_061595201
LinkDB
All DBs
Position
14:42528270..42544090
Genome browser
AA seq
382 aa
AA seq
DB search
MDRFSWSNGLLEINETLVIQQRGVKLYDGDDKAKLDLGTALLSTHRLIWRETKNQECCVS
MPLSQILFFEEQAAGIGKSAKIVIHLHPSPSNKEPGPYQHSKFSYIKLSFKEHGQIEFHR
RLSEEMTQKRWESTPVSQPISTGTGTQAGRTRAVGIVGIERKIEERRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIADPVTRETHGSGTH
YHMQLARQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKVFESLKLP
VRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagattttcctggtcaaacgggcttttggagataaatgaaactctggtaatccag
cagagaggagtgaagctttacgacggcgatgataaggcgaagctggacctcggaaccgcc
ttgctgagcacccaccggctgatctggagggaaaccaagaaccaggaatgctgcgtctcc
atgccgctgtctcagatcctcttcttcgaggaacaagctgcaggaataggaaagagtgca
aaaatcgtgatccacctgcatccgtcgcctagcaacaaggagccgggtccgtaccagcac
agcaagttctcctacatcaagctgtccttcaaggagcacggccagatcgagtttcacagg
aggctgtcggaggagatgacacagaaacggtgggagagtacgccggtttcacagcccatc
tccacgggaaccgggacgcaggcaggaaggacacgtgcggtggggattgtcggcatcgag
aggaagatcgaggagagacggaaagaaacagacaaaaacatttctgaggcgtttgaggat
ctcagtaaactgatggtgaaggccaaagagatggtggaactgtccagatccatcgccaac
aaaatcaaagacaagcagggagacataacagaagatgagacgatacgtttcaagtcgtac
ctgctgagcatgggcatcgcggaccccgttaccagggaaacgcacggctccgggacccac
taccacatgcagctggcccggcagctgggagacatgctgcaggctccgctggaggagcgc
ggaggcatgatggccctcaccgaggtttactgcctcgtcaaccgcgccagagggatggag
cttttatctccagaggatctggtaaacgcttgtaaggtgtttgagtcgctgaagctccca
gtgaggctgcgtgtgttcgacagcggcgtgatggtggtgcagctgcagtcccacagcgag
gaggagatgatcgcctcggctctggacaacgtgtcggacaagggctccctgacggccgag
gagtttgctaagctgctgggtctctccgtgctgctgtccaaggagcggctcctgctggct
gagaagatgggccacctgtgcagagacgactcggtggagggtctgaggttctaccccaac
ctgttctga
DBGET
integrated database retrieval system
