Cololabis saira (Pacific saury): 133459349
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Entry
133459349 CDS
T09849
Name
(RefSeq) uncharacterized protein LOC133459349
KO
K24891
homeobox protein PKNOX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133459349
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133459349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Meis_PKNOX_N
Homeobox_KN
Innexin
Homeodomain
RNA_pol_3_Rpc31
Nop14
NOA36
CDC45
DARPP-32
Motif
Other DBs
NCBI-GeneID:
133459349
NCBI-ProteinID:
XP_061595223
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All DBs
Position
14:24549289..24701849
Genome browser
AA seq
1032 aa
AA seq
DB search
MMQHVSPAPAVTMMATQSVPPPSYQESQQMTGTSQQNSKTPQVHIPAASAAGNTSVSVTL
DPQAQLESDKRAVYRHPLFPLLALLFEKCEQATQGSECITSASFDVDIENFVHQQEREHK
PFFSEDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLG
GPYSPTHTSISMQQELIQTSSSPSMTSVSSSVTPAGIVVPAGGLQQGNVAMTAINSQVVT
GGTLYQPVAMVTSQGQVLTQALTPGSIQIQNSQVNMDLSSLLDSEDKKSKNKRGVLPKQA
TNIMRSWLFQHLMHPYPTEDEKRQIAAQTSLTLLQVNNWFINARRRILQPMLDASNPDPA
PKAKKMKSQHRPTQRFWPDSIVAGVLQTHRSQTGNNSENLSMDSLQSLSSDSATLAMQQA
MLAADDSMDGTEDEDEEEEEEEEEEEEGMEEEEEEEEEDGDQEHDRERQLSSRGGGRRDL
TLESREDLEWKEVPISQRFHGSQQSRNRQKFYGSQQKGNSLGFHRKPDPARPGPAQIHPL
IYPGPPWILKELSKSVQAFTSSLWPCKLNLSAEKPGKPKVLEMSIAQAAAKAMLSDALLQ
DRAGIYRISHLELELPMDKVIKYVSVGLPLMLVCMAFTREISLGPQISCFTPSNFTAKQA
DYVDTYCWDSLMHHEFDSDGNFEQRSLWVHKMFPYSLLAMAILMYLPALIWRQLVMPSLS
SDLLFIIDELDKSYNRSIRMAQSILDMRQNTKNPLTFQAELQRAKRKRYFEYPLLERYLQ
CKQNSYFLVSMLFLRGFLLLTFMTSACLYLAYFHLSAFLQDEFSCFVRTGMLRDQTWIPE
LVQCKIIGQLVFQVISVANGAIYVLLAPIVLFSLIRLFVWDTTFISVYEVLPALDLIKRQ
RLGCPLNDLNVLLLFLRANVAHLKSYGQVRALCSLAPPQVGNATAEQGLNAMLTQEEIEE
REEAAMELAEEIGEAKEEGKLNLVDIMTILGAAQGRVANCSEKRPLVEENMSLEPNHQGY
HELKETAPFSHY
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacatgtatccccagcacctgcagtgacaatgatggccacccagagtgttcct
ccaccttcgtaccaggagagccaacagatgacgggcaccagtcagcagaactccaagacc
ccacaggtccacatcccagcggcttctgcagctggaaatacttctgtcagcgttactctc
gaccctcaggcccagcttgaatctgacaagagggctgtttacagacatccgttgttcccg
ctgctggcactgttgtttgagaagtgtgaacaagccacgcagggatctgaatgcatcaca
tcagccagctttgatgttgatattgaaaactttgtccaccagcaagaacgggaacacaaa
ccattcttcagtgaagatccagagctggacaacttgatggtgaaggccatccaggtgttg
cggatccatttgttggagttagagaaggtcaatgaactctgtaaagatttctgcaaccgt
tacattacttgcctcaagaccaagatgcacagtgacaaccttctccgtaatgatcttgga
ggaccttattctccaacacataccagtatcagcatgcagcaggaactaattcagacctcc
tcctctccatccatgacctctgtctccagctccgttacccctgcagggattgtggtacct
gctggaggtctgcaacagggcaatgtcgccatgaccgccattaactcgcaagtggtgaca
ggtgggaccctgtaccagccggttgctatggtgacatcacaaggacaagtattaacacag
gcgctaacgccaggaagcatccagatccagaattcacaggtaaacatggacctttcgtct
ctgttggacagcgaagacaagaagtccaagaataagaggggcgtcctgcccaaacaagcc
accaacatcatgcgctcctggctcttccaacatctcatgcacccatacccaacagaagac
gagaagaggcagattgcagcacaaacaagtctcacacttttacaagtgaacaactggttc
atcaacgcgcgtcgccgtatccttcagcccatgttggatgccagtaatccagacccggct
cctaaagcaaagaaaatgaagtcccagcaccgtccaacgcaacgcttctggcctgactcc
attgttgctggagttctgcagacacacagatctcagacaggaaacaactcagaaaacctg
agcatggacagcctgcagtcgctctcctcagactcagccaccctggccatgcagcaagcc
atgctggcagctgacgactctatggatggcacagaggacgaggatgaagaggaggaggag
gaggaagaggaggaggaggaaggtatggaggaagaggaagaagaagaagaagaagatgga
gatcaggaacatgacagggaaaggcaactgtccagcaggggagggggaagaagagatctg
accttggagtccagagaggacctggagtggaaggaggttcccatcagccagaggttccac
ggcagtcagcagagcaggaacaggcagaagttctacggcagtcagcagaaggggaatagc
ctggggttccaccgcaaaccagacccagctcgaccaggtccagcccaaatccaccctctc
atttacccgggccctccctggatacttaaggagctgtccaaaagtgtgcaggctttcaca
agcagtctctggccttgcaaactaaacttatcggcagaaaaacctggaaaacctaaggtt
ttggagatgtcgatcgcccaggcagcggccaaggccatgctctctgacgccctgctgcag
gaccgcgctgggatttacaggatcagccacctggaactggagcttcctatggacaaggtt
atcaagtatgtgtctgtgggcctcccactgatgctggtgtgcatggccttcacccgcgaa
atctccctagggcctcagatcagctgtttcactcccagcaacttcacggccaagcaggct
gactacgtcgacacgtactgctgggattcgcttatgcatcatgagttcgacagtgatggg
aactttgagcagcgttctctctgggtgcacaagatgtttccttactctcttctggccatg
gccatcctgatgtacctgccggctctgatctggcgccagctcgtcatgccctcgcttagc
tccgacctgctgttcatcattgatgaactggacaaatcgtacaaccgctcgatccgaatg
gcccaaagcattctggacatgcgccaaaacactaaaaaccccctcacattccaggcagag
cttcagagggccaagaggaagcgatactttgagtatccccttctagagagatacctgcag
tgcaagcaaaactcttacttcctggttagcatgcttttcttgcggggcttcctcctcctg
accttcatgacttctgcttgcctctacctggcatacttccacctctcagccttcctgcag
gatgagttcagctgttttgtccgcactggtatgctgcgtgaccagacctggattccagag
ctggttcagtgcaagatcattggacagttggtgtttcaggtgataagtgtcgcaaacggg
gctatctatgtcctactggcacccattgtcctctttagcctcattcgactctttgtgtgg
gacactaccttcatctctgtctatgaggtcctgccagctctggatctcatcaaacgccaa
aggctgggctgcccgctgaatgacctaaacgttctcctgctctttttgcgtgccaacgta
gctcacttgaagtcctatggacaggtcagggctctttgctctcttgcaccccctcaagtg
ggcaatgccactgctgagcagggactaaatgcaatgttgacacaagaagaaatagaggag
cgtgaagaggcagctatggagctagcagaagaaattggggaagccaaagaggaaggaaaa
ctcaacctggtggatatcatgactattctgggagcagcacaaggaagagtggcaaactgc
agcgagaagaggcctctagtggaagaaaatatgagtctggagccaaaccaccaggggtac
catgagttgaaggagactgcaccctttagtcattactag
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