Cololabis saira (Pacific saury): 133459388
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Entry
133459388 CDS
T09849
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133459388
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
133459388
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
TSP_1
TSP1_spondin
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
133459388
NCBI-ProteinID:
XP_061595263
LinkDB
All DBs
Position
14:42555589..42568804
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AA seq
957 aa
AA seq
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MPPAASPLPFLLALAGYAFGGLSIWPSFHVALSNRSVFVNFSTNSSGGVAAGNGSLSLVD
TDSNTTLLSRNLPGNPPAGRVEFHCSCFLYAGTFRFLLRRPGGPPGSHGNGSGRAEGSTL
WWSSELQVQWPTFHLSVERDGNQSGSFQVGISTNEHFQACSRGIDSALFLEVSYVEHNQI
GRNSIDKVRARTRHPILPLRTQSIQLACVFPFTEKDFVRLALRSPHAAQEVKSSDALHLT
RIFSYKLLVDDAGAYRSGCEGTMTVRMVPPPCASISGKVLLYSDAGVGSPPAPAGFGAEE
PSSPPLAYNWLTQGENETEFNCSVFHPGKNKYCFRFVFNFSRSPSPAQVCLVVYRSAESW
GPWQPWSPCSVSCGEGLRERERGCLLPPGGPGGRCSGQPREQSPCSLEDCPGRPPSPSPP
PGSPPLLGGDMIVVIGISLCLAVIAATVLVTVWRRFCRTPPCSPVRGGPLHPPGGRKLSD
EASICGHSLQRPSLSEGAPPRGQAVAQTRVVPLGPDPDRLSPSGQKMLPPIFGYRLAQQQ
LKEMKKQGLREATQLYHVSSSPVPDTLAETDASAPSAPSAPSAPPTVGAATPDRLSPRVD
LVLGPPVSARAGGTRGAGSDWRERTADWVEMVERSGFAGLRGGGDAGTGNSYPRNPNFRR
TSSFTDPKLQQAVPGPSRPFRERSMTQVGSRTLPEGSSWSRGRWESPPPHPQPIPEHRVS
DWTKAGPQRPDQRKPWTELKNTGTNTNASSGPGKPVSTAERRNRCDPAGGAGGPGPGGPG
PVPGPGGPGPVPGLRGPGPVPGVKGPVPASGPGGPGPFPGPRGPGSVPGVRGPVPVPGPR
GPGPASGPGGPAPHAPHQLSLDRAEQNWNRRGPSPIQRNILARKLKEAQSSSGARGGRQR
SSSFSAAPPDPRKARCSSLSMSGDITAGGGASPYRLTEAEQRMLDLDLVPVYVREED
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggcggcctcgccgctgcccttcctgctggcgctggcgggatacgccttcgga
gggctcagtatctggccctccttccacgttgcccttagcaaccgcagcgtgtttgtgaac
ttcagcaccaactccagcggcggcgtcgccgccggcaacggcagcctctccctggtggac
acggacagcaacaccacgctgctgagcaggaatctgcccggcaaccccccggccggcagg
gtggagttccactgctcctgcttcctgtacgccgggaccttccggttcctgctgcggcgg
cccggcggcccccctggttcccacggtaacgggtcgggccgggccgagggctccaccctg
tggtggagctcggagctgcaggtgcagtggccgacgttccacctctccgtggagagagac
gggaaccaatcaggatctttccaggtcggaatatccacgaacgagcacttccaggcgtgc
tcccgcggtatcgactcggcgctcttcctggaggtcagctacgtggagcacaaccagatt
gggcggaacagcatcgacaaggttcgagcccggacgcgccacccgatcctgccactgcgg
acccagagcattcagctagcctgcgtcttcccgttcacggagaaggactttgtccggttg
gccctgcggtcgcctcacgccgcccaggaggtgaagagctccgacgccctgcacctcacc
cggatcttctcctacaagctgctggtggacgacgccggcgcctaccggagcggctgcgag
gggacgatgacggtgaggatggtgcctccgccgtgcgctagcatcagcgggaaggtgctg
ctgtacagcgacgcgggtgtcggttccccgccggcaccggccgggtttggggcggaggag
ccgtcctcgccgccgctggcctacaactggctgacgcagggcgagaacgagacggagttc
aactgctccgtgtttcacccggggaagaacaagtactgcttccgcttcgtcttcaacttc
agccgctcgccgagtcccgcgcaggtgtgtctggtggtctacaggagcgcagagtcgtgg
ggcccctggcagccctggagcccctgcagcgtgagctgcggcgagggcctgagggagcgt
gagcgaggctgcctgctgccccccggtggcccgggggggcgctgcagcggccagccgagg
gagcagtccccctgttccctggaggactgtcccggccggcccccgtccccgtccccgccc
ccggggagtccccccctgctggggggggacatgatcgtggtgatcggcatctccctctgc
ctggccgtcatcgccgccaccgtgctggtgacggtgtggaggaggttctgccggaccccc
ccctgcagcccggtccgcggggggcccctgcaccccccggggggccgcaagctgtcggac
gaggcctccatctgcggccacagcctccagaggcccagcctgtccgagggcgcccccccg
cggggccaggccgtggcccagacccgggtggtgccgctgggcccggacccggaccggctc
tcccccagcggccagaagatgctgccgccgatcttcgggtaccggctggcccagcagcag
ctgaaggagatgaagaagcagggcctgagggaagccacacagctgtaccacgtctcgtcc
agccccgtccccgacaccctggcggagacggacgcctcggccccctccgccccctccgcc
ccctccgccccccccactgtgggtgctgccaccccggaccgcctcagccccagggtggac
ctggtcctggggccccccgtctctgcccgggccggcgggaccaggggcgcgggctcggac
tggcgcgagcgcacggccgactgggtggagatggtggagaggagcgggttcgccggcctc
agggggggcggggacgccgggaccgggaactcctaccccaggaaccccaacttcaggcgc
acctccagcttcacggaccccaagctgcagcaggccgtcccggggccgtcccggccgttc
agggagaggagcatgacccaggttggatctcggactctgcctgaaggaagtagttggagc
aggggaaggtgggagagtccgcccccccaccctcagcccatcccggagcaccgggtctcg
gactggactaaagccggaccccagagacccgatcagaggaaaccctggaccgagctcaag
aacacggggacgaacacaaacgcctcttcaggacccgggaaacccgtgagcaccgcggag
aggaggaaccgctgcgaccctgcaggtggggctgggggtccaggcccggggggtccaggg
ccagttccaggcccggggggtccagggccagttccaggcctgaggggtccagggccggtc
ccaggggtgaagggtccagtgccggcctcaggcccggggggtccagggccatttccagga
ccgaggggtccagggtcggtcccaggggtgaggggtccagttcctgttccaggaccgagg
ggtccagggccggcctcagggccggggggcccagccccacacgccccccaccagctgagc
ttggaccgggccgagcagaactggaaccgccggggcccgtccccgatccagaggaacatc
ctggcccggaaactgaaggaggcccagtccagctccggggcccgggggggccgccagcgc
agctccagcttcagtgccgcccccccggacccgaggaaggcccgctgcagctctctgagc
atgtccggtgacatcacggccgggggcggggcctccccctacaggctgacggaggcggag
cagaggatgctggacctggacctggtcccggtctacgtccgcgaggaggactag
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