Cololabis saira (Pacific saury): 133459436
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Entry
133459436 CDS
T09849
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133459436
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133459436
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
133459436
NCBI-ProteinID:
XP_061595338
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All DBs
Position
14:761837..811134
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AA seq
971 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSALEKAYLGAVEKGDYASVKQALKEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLIHKK
PSGGMQVPPILLDKQYSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYRDDINILEEEGNNDLARLNLAIKYYQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCVFIGLLYPVFAICYLTVPKSRYGLFIR
KPFIKFICHTASYLIFLFLLLLASQHIVTTEQGRQDRQGPAPTPVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDERGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FIGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
PPFNIIPSPKSFWYLVCWIKRQVCKRRRSKCRETIGTLGRRAAENLRINHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGLLKTGKPSLQGAIASGSSVESG
LAYPNSSLKISSGTPSSKVKSKLNRFKITTSILKQSSSSASPRPPEVFNGLPNGLLSLVS
GQSCSDVSSQKRSDPKDSSDFGLFQKHHSGSKDVTSGAGEISREMYSLSEEAGESGGSDD
EEQSKGARAKTAKELPGTERRETSPERRQASDISCNFEENVDKPSVEEDTDVPCIDSVAD
AYLSEPRRKYE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtactaccggcggactgacagctcttcataccgggaccgcatcccgctg
agaattgtgcgggcagagtcggagctgtcagcgttggagaaagcctacctcggcgctgtg
gagaaaggagactatgccagtgtgaagcaagctttgaaggaggcagagatttatttcaag
atcaacattaactgcatcgaccctctcggccgcacggctcttctgattgccattgagaac
gagaacctggaaattattgagctcctgctgagcttcaacgtctacgttggtgatgccctc
ctgcacgccatccggaaggaagtggtgggagccgtggagctgctgctcattcacaagaag
cccagtgggggcatgcaggtccctcctatcttattggacaagcagtactcagacttcacc
cctgacatcactcccatcatcctcgccgcacacaccaataactatgaaattatcaagctt
ctggtgcagaaaggtgtgtctatgccacagccacatgaggtgcgctgcaactgtgtggag
tgtgtgtctagttcagacgtggacagcttgcggcactcgcgctcccgcttaaacatctac
aaagcgctgtcaagcccctcattaatagcactctccagcgaagaccctttcctcactgca
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaatgagtttaaatctgaa
tatgaggagctctctcagcagtgtaaacagtttgctaaggatctcctggaccagacgagg
agctccagggagctggagctgattttaaactacagagacgatatcaacatattggaagaa
gaggggaacaatgatcttgcacgcctcaatttagcgattaagtactaccaaaaagagttt
gttgctcagccgaattgtcagcagcttttggcatccaggtggtacgatgagtttcccggc
tggaggcggcgccactgggcaggaaagttcatcacctgtgttttcatcggcctcctctac
cccgtgttcgctatctgctacctcaccgtgccaaagagccgctacggcctcttcatccgc
aagcccttcatcaagttcatctgccacacggcgtcctacctgatcttcttgttcctgctg
ctcctcgcctcccagcatattgtcaccacagagcagggcaggcaagacagacagggtcct
gcaccgacccccgtggagtggatgatcctgccatgggtgctgggattcatctgggcagag
atcaagcagatgtgggatggaggcttccaagactacgtccatgactggtggaacctgatg
gacttcgtcatgaactctctgtacctggccaccatctccctcaagattgtagcctacact
aagtacagtggcagtaaacccaggaaccagtgggaaatgtggcaccctactcttgttgct
gaggcattgtttgccatagcgaacatattcagctccctgcgcctcatctcactcttcaca
gccaactctcatctggggccgctgcagatctctctcgggcgaatgctgctggacatcctg
aagttcctcttcatctattgtctggttttactggcctttgctaacgggctgaaccagctg
tacttctactatgagacgaaggcttcagatgagagggggaaatgcaagggcatccgctgt
gtggagcagaataatgccttctcaactttatttgagaccctacagtctcttttctggtcc
atctttgggctcatcagcctctatgtaaccaatgtggatgcagaccaccagttcactgaa
tttatcggggccaccatgttcggcacatacaacatcatttcgctggtggtcctcctcaac
atgctcatagccatgatgaacaactcctaccaacacattgctgatcatgctgacatcgag
tggaagtttgccaggacaaagctgtggatgagctacttcgaggaaggagccactctgccc
ccccctttcaacataatccccagccccaaatccttctggtatcttgtgtgttggatcaag
agacaagtgtgcaagagaagacggtccaagtgccgcgaaactatcggaacgctcggaaga
cgagcagcagagaacttgaggataaaccatcaatatcaggaggttttaaggaatctggtg
aaacgttatgtggctgctatgatcagagatgccaagacagaggaaggcctgactgaagaa
aacttcaaggagctgaagcaagatatctccagtttccgctacgaggtgatgggcttgttg
aagacagggaagccttctctgcagggtgcaatagccagtggaagctcggtagagtccggt
ctcgcttatccaaattcctcacttaaaatttcctccggaactccgagcagcaaagtgaaa
agcaagctaaaccgatttaagataaccacatcgattctcaagcaaagcagttcgtcagct
tcacccaggccacccgaagtcttcaacggtctacccaacggactcttatcgctggtctca
ggccagagttgcagcgatgtttcaagtcagaaaagaagtgaccccaaagacagtagtgac
tttggtttgttccagaaacaccacagcggcagcaaagacgtcacttcaggtgcaggagag
atttccagagagatgtactctttgtcagaagaagcgggagagtctgggggctcagatgat
gaggagcagagcaaaggagccagagcaaagactgcgaaagaactaccagggacagagagg
agggaaacatctcctgaaaggaggcaggcttcagacatcagctgtaactttgaagaaaat
gtggacaaaccaagtgtggaagaggataccgatgtaccttgtattgactcagtagctgat
gcatatttgtccgagccaaggagaaaatatgaatga
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