Cololabis saira (Pacific saury): 133459438
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Entry
133459438 CDS
T09849
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133459438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133459438
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
133459438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
CCDC-167
Motif
Other DBs
NCBI-GeneID:
133459438
NCBI-ProteinID:
XP_061595340
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All DBs
Position
14:996779..1018886
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AA seq
830 aa
AA seq
DB search
MQQVLEYALDRAEYIVESAQQRPAKRRISSGGRKSLYQKLYELYIEECEKEPELKNLRRN
VNLLEKLVSQESVSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEERELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVIVEVRDYRQAGNTKIPTYQSRHILLRPTMQTLICDVHAM
TSDHHKWTQDDKLQLESQLILATAEPLCLNPSISVTCTANRLLYNKQKMNTHSMKRCFKR
HSRAALNRQQELSHLPIPPQLRLYDYLQRRKERKPAPVIDLKISKAGNCVDTWKQSNCQL
TVPKEIDVEKYAVVEKSLQLEESQPTTVIWPAEEVVDDYTFECEVGGQAQRTKVSIFQSM
GDPLVYGKIYCAKEPKAEEDSTDLKLIHPPFLIGSKIDAERFLTQYKGVYERDVKCQVKM
SHNSGTVGQGPPSPSKDEGDGISSLVQTSLLGKGVKHRPPPIKLPSGSGSSSSGNSYSSQ
TTSGLLKCPTPPPPSKSQSLSRKHSMELSQVGLLSPASLSPMGSTQRSGTPKPSTPTPTN
TPCSTPHPSDSLCAPLSVTPTPSDPGIQSQPALLTPFAQQQLALSQPLPVMTIPLPTMGT
SITTGTTSSQVMANPAGLNFINVVSSVCSPQTLMSGSSPMLGPGLNLSGILPPGGLMPTM
QSAAQAGSPFGLNNSAGLRPLNLLQIPTGPLIFNSLQQQQLPQFSPQQSQSATSSPQQQG
ETTDQGSDPSLGNQQTAVINLGVGGFMPPQAAVLSQLGCGLDGSGPPLPSPRLQQQHQPQ
IQLQFLQHQMQQQQMAMGAAAPQGGAPRQHTASQPRSKRKRSTPQPLPKS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagttttggaatatgcattggatcgagctgagtacatcgttgaaagtgctcaa
caacgtccagccaaaagaagaatttcgtctggtgggaggaaaagtttgtatcagaaactc
tatgagctatatattgaggaatgtgagaaagagccagagttaaagaatctgaggagaaat
gtgaatctgctggagaagctggtatctcaggagtctgtgtcatgtttggtggttaacctg
taccctggaaatgaaggctattctttaatgctcaggggcaaaaatggatctgattctgaa
accatccgcctgccatatgaagaaagagagctgttggagtacctggatgctgaggagctg
cctccgattctggtggatctgttggagaaatcacaggtgaacatcttccattgtggctgt
gtaatagttgaggtgagagactacaggcaagcaggtaataccaagattcccacctaccag
agcaggcacatcctgctgcggccaaccatgcagactctaatatgtgatgtccacgccatg
actagtgaccatcacaaatggacacaggatgacaagttacagctggagagtcagttgatt
ttggcgactgctgaacccctgtgcctgaatccctctatttctgttacttgcacagccaac
cgcctactatacaataaacagaaaatgaacactcactcgatgaaaaggtgtttcaagaga
cactctcgagctgccctgaacaggcagcaggagctgtctcacctccccataccaccacag
ctgcgactctacgactacctacagaggaggaaggagaggaagccggctcctgtcatagat
ctgaagatttcaaaggctggaaactgtgtagacacatggaagcagagcaactgccaactc
actgtaccaaaggaaattgatgtggaaaagtacgctgtggttgagaaatctttgcagctg
gaagaatctcagcccactactgtaatctggcctgctgaagaagttgtagacgactataca
tttgagtgtgaggtggggggccaagctcagaggaccaaggtgtccatcttccagtcaatg
ggagacccgctggtgtacgggaagatctattgcgctaaagaaccaaaagcagaggaggat
agcacagacctaaagcttatacatccaccttttcttatagggtcaaagatagatgctgaa
aggtttctaactcagtacaaaggagtgtatgagagagatgtgaagtgtcaggtcaagatg
tcccataactcaggcaccgtgggacaggggcctccctcccccagcaaagacgagggtgat
ggtatttcttcactagtccagacgtccttgttaggaaaaggggttaagcaccgcccccct
cccattaaactgccttcaggatcgggtagcagctcctcaggtaattcgtatagttcacaa
accaccagtggtctacttaagtgtcctacgcccccgccgccatccaaaagccagtctctg
tccaggaaacactccatggagctgagccaggtgggcctgctgtcgcccgcctccctctcc
cccatgggctccacacagagatcggggacccccaaaccatctacccccacaccgactaac
acaccgtgctcaacgccacacccctcagactccctgtgtgctcctctctcagtgactccc
accccctcagatcccgggatccagtcacagcctgccctcctcacaccttttgcccagcag
caattggctctaagccaaccacttcctgttatgaccattccactgcccaccatgggtacg
tccatcactacaggaaccacgtcttcccaggttatggccaacccagccgggctcaatttt
attaacgtagtcagctctgtctgcagtcctcagaccttgatgagcggctccagccccatg
ttgggtccagggcttaacctgagtggaatcctgccaccaggagggttgatgcccaccatg
cagtccgcagcccaggctgggagtccttttggccttaacaacagtgctgggctgagacca
ttgaacctgctacagatccccactggtcctctcatctttaactctctgcagcagcagcag
ctcccccagttctcgcctcagcagagtcagtcagccacgtccagtcctcaacagcagggg
gagacgacggaccagggttcagatccaagtttaggaaaccagcaaactgctgtgatcaac
ctgggtgttggaggcttcatgcccccacaggcagcagtgctgtcccagttgggctgtggg
ctggacgggtctgggcccccgctgccttctccaaggcttcagcagcagcaccagccacag
atccaattgcaattcttgcagcaccaaatgcagcagcagcaaatggctatgggagcagcg
gctcctcaggggggagcgccgcggcaacataccgccagccagccaagaagtaagaggaag
aggagcacaccgcagcccctccccaagtcctga
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