KEGG   Cololabis saira (Pacific saury): 133459452
Entry
133459452         CDS       T09849                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03030  DNA replication
csai03410  Base excision repair
csai03420  Nucleotide excision repair
csai03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    133459452
   03410 Base excision repair
    133459452
   03420 Nucleotide excision repair
    133459452
   03430 Mismatch repair
    133459452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csai03032]
    133459452
   03036 Chromosome and associated proteins [BR:csai03036]
    133459452
   03400 DNA repair and recombination proteins [BR:csai03400]
    133459452
DNA replication proteins [BR:csai03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    133459452
  DNA Replication Termination Factors
   ELG1-RFC complex
    133459452
Chromosome and associated proteins [BR:csai03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    133459452
DNA repair and recombination proteins [BR:csai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     133459452
  Check point factors
   HRAD17(Rad24)-RFC complex
    133459452
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 DUF2247 ATPgrasp_ST AAA_11 AAA_30
Other DBs
NCBI-GeneID: 133459452
NCBI-ProteinID: XP_061595376
LinkDB
Position
14:1581659..1599096
AA seq 356 aa
MSLWLDKYRPSSLGKLDFHKQQAAQLKSLVQCGDFPHLLVYGPAGAGKKTRITCLLRELY
GAGVEKLRIEHQTVVAPSKKKIEINTISSNYHLEVNASDAGNQDRVVIQELIKTMAQSQQ
IQSNSQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIEPIRSRCL
AIRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKHISDKSGRNLRKALLMCEACRVQQYPF
SVDQEVPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIMKGLVKELL
SNCDGQLKTEVAHMAAYYEHRLQLGNKAIYHLEAFTAKFMAMYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtggctggacaagtaccggcccagctccctgggaaagctggacttccacaag
cagcaggcggcccagctgaagagcctggtccagtgcggggacttcccccacctgctggtg
tacgggccggccggcgccgggaagaagacccgcatcacgtgtctgctgagggagctgtac
ggagccggcgtggagaagctgcgcatcgagcaccagaccgtggtggccccgtcaaagaag
aagattgagatcaacaccataagcagcaattatcacctggaagtcaacgcaagtgatgca
gggaaccaggaccgtgtggtgattcaggagctgatcaaaaccatggcccagtcccagcag
atccagtccaacagccagcgagacttcaaagtggttctgctaacagaggtggaccgactc
accaaagacgctcagcacgccttgcgtcggaccatggaaaagtacatgtccacctgccgg
ctcatcctctgctccacctccacctccaaagtcatcgagccaatcagaagccgttgcctg
gccatcagagttcctctgcccagcaccgaggaggtctgcagtgttctgacgtcggtctgt
aagaaggaggggctgctcctgccgccggagctggccaaacacatcagtgacaagtccggc
cgcaacctccgcaaagctctgctgatgtgcgaggcctgcagggttcagcagtatccgttc
tcagtggatcaggaagtcccagagacggactgggaggtttacctgagagagacggccaac
gccatcgtcagccagcagagtcctcagaggctgttggaggtccgggcccggctgtacgag
ctgctgacccactgcatcccccccgacatcatcatgaagggtctggtgaaggagctgctc
agtaactgcgacggccagctgaagacggaggtggcccacatggcggcctactacgaacac
agactgcagctcggcaacaaggccatctaccacctggaggccttcacggccaagttcatg
gccatgtacaagaagttcatggaggacggtctggatgccatgatgttctga

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