Cololabis saira (Pacific saury): 133459472
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Entry
133459472 CDS
T09849
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04080
Neuroactive ligand-receptor interaction
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133459472 (gabra1)
04082 Neuroactive ligand signaling
133459472 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133459472 (gabra1)
Ion channels [BR:
csai04040
]
Ligand-gated channels
GABA-A
133459472 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
133459472
NCBI-ProteinID:
XP_061595413
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Position
14:3738478..3767496
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AA seq
461 aa
AA seq
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MSGRSRVACLCLWAYLLITNSVQAGKSSGQNGMTDEQKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYPTATATPFAPNPARNPGLATIAKSAPPPPDEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMGHT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccggagcagggtggcctgtctgtgtctctgggcttatttgcttatcaccaac
agcgtgcaagctgggaaaagctctgggcagaacggcatgacagatgagcagaaagataac
accacagtgttcactaagatcttagacagccttctggacggctatgacaatcgcctccgg
ccaggactgggagagcgtgtaactgaagtcaagactgacatttttgtgactagtatcgga
ccagtttcggaccatgacatggagtacaccatcgatgtcttcttcagacagagctggaag
gatgaaagactaaagttcaaaggccccatggccgtcctacgtctcaacaacctgatggcc
agcaagatctggacccccgatactttcttccacaacggcaagaagtccgtggctcacaac
atgaccatgcccaacaagctgctgcggatcacggaggagggcacgctgctctacaccatg
aggcttacagtaagagcagaatgccccatgcacctggaagacttccctatggatgcccat
gcctgtccgttgaagtttggcagctatgcctacaccagagcagaggtggtgtacgtgtgg
acgagaggcgccgctcagtccgtggtggtggcagaggacggatccagattaaaccagtat
gatctgatggggcagagcgtggattctggtgtggtgcagtccagtacaggagagtacgtt
gtgatgacaacccactttcacctgaagaggaaaattggctactttgtgatccagacgtat
ctgccctgcatcatgacagtcatcctctcccaggtgtctttctggctgaacagagagtcc
gtccctgccaggactgtctttggagtgaccactgtgctgaccatgaccactctcagtatc
agtgccaggaactctctcccaaaagtggcttatgccacggccatggactggtttattgcc
gtctgctacgccttcgtcttctcggcccttattgagtttgccaccgtgaactacttcact
aagagaggttacgcttgggatggaaagagtgtggtgcccgagaagcaaaagaagaagaag
gagtctctcctgaagaagaacaacaccacagcctacccaactgccaccgctacgcccttc
gcccccaaccccgccaggaaccctggattggccacaattgccaaaagcgcccccccaccc
ccagatgagcccaaggaggagccaaagcccaagccccccgaggccaagaagacctttaac
agtgtgagcaagatagacaggattgccagaatagccttccctctgctctttggaaccttt
aacttggtctactgggcaacctacttgaataagaagcccaaattgcaggggatgggtcac
acctaa
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