Cololabis saira (Pacific saury): 133459495
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Entry
133459495 CDS
T09849
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133459495 (msx2b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
133459495 (msx2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
LodA_C
Tropomodulin
Motif
Other DBs
NCBI-GeneID:
133459495
NCBI-ProteinID:
XP_061595460
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Position
14:complement(6372990..6375656)
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AA seq
279 aa
AA seq
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MASRETWKEFKGCSSSEEDGPRAAPALRRHRHPFSVEALMSGRTGADSPSPPGDHTRIPP
GEDARSPGGDPRSPPGDHTRSPGGDPRIPPGEDDSRSPGIDARSPVKSEASEPEDCSSWL
HAGFHSQPRHITPSCQLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSL
TLTETQVKIWFQNRRAKAKRLQEAELEKLKMASDAKTAVATATATGALHPGFTLPLSLGA
MSLYGQSYSAFHHHHRPVLPITHLGLYAAPLGYGMYHLS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgggagacctggaaggagtttaagggctgcagctcgtccgaggaggacggt
ccccgcgcggccccggcgctgcggcggcaccggcacccgttcagcgtggaggcgctgatg
tcgggcaggacgggggcggacagccccagcccgcccggggatcacacccgcatccccccc
ggggaagacgcccgcagccccgggggggacccccgcagcccgcccggggatcacacccgc
agccccgggggcgacccccgcatcccccccggggaggacgactcccgcagccccgggatc
gacgcccgcagcccggtcaagtccgaggcgtccgagccggaggactgctcgtcctggctc
cacgccggcttccactcgcaaccacgtcacatcactccctcctgtcagctgaggaagcac
aagaccaacagaaagcctcgcacccccttcaccacgtcccagcttctggctctggagagg
aagttccggcagaagcagtacctgtccatcgcggagcgggccgagttttcctcctccctg
accctgacggagacccaggtgaagatctggttccagaaccgccgggctaaagccaagagg
ctccaggaggccgagctggagaaactcaagatggcctcggacgccaagacggcggtggcc
acggccactgccacgggagctttacaccctggctttacgttacctctgtcactgggcgcc
atgtctctgtacggacagtcgtactccgccttccatcaccaccacagacccgtactgccc
atcacacacttaggactctacgcggcgcctctgggctacggcatgtaccacttatcataa
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