Cololabis saira (Pacific saury): 133459547
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Entry
133459547 CDS
T09849
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133459547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133459547
03400 DNA repair and recombination proteins [BR:
csai03400
]
133459547
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
133459547
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
133459547
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
INTS7_N
EnP1_C
Motif
Other DBs
NCBI-GeneID:
133459547
NCBI-ProteinID:
XP_061595571
LinkDB
All DBs
Position
14:8815912..8881026
Genome browser
AA seq
1410 aa
AA seq
DB search
MAHSKARATDGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTDFLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNFVKERTLDKRWRVRKEAMMGLASIYRKYA
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPHNLDTTERMKCLYYL
YATLDTNAVKALNEMWKCQNLLRHNVKDLLDLIKKPKSEASSKAVFAKIMVITRNLPDPG
KAQDFVKKLAQVLDDDERIRDQLETLVSPSCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTEEAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGSKLEDSFPHIKSVLLPVLQAKAKR
GPPRQAKYAIHCINAMFTNRDTHFAQIFEPLHKGLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRIQGKKTTKLWVPDEEVSPETLAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFAQKLHRGLCRLRLPLEYMAIFALCAKDPVKERRAHARQ
CLAKNVNIRREYLKQHAAISDKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEA
LWFVLEIIMAKNENNSHAFIRKMVENIKQTKDGQSPNDPKDNEKLYTVCDVAMHIIMSKS
TTYSLESPKDPVLPSRFFTKPDKNFNNTKNYLPSEMKSFFTPGKPKSANVLGAVNKPLSS
AGKQLQSKASRMETTSNHDSSSNPSSPQRSKSRHDSTEMDHSENEDISLKRADSVDKDIE
KPRGRKRGVTTSDDQESKPKRGRKKAGANASVVAEPEDPWDGDTQPEDEQNSPPKKGRRG
RPPKAAAATQNTPAKGRRGRKKAVPSPEEEEEEEEEEEEERAEEEAVEEDEEEDEDRSSE
NMEAKTKGGRQARTPRRSQGSSESAESTPQKRRGRPPKSAQPAAKKPTRGGRSKAAVAKD
EEEEEEEEEEEEQEDEPTPRGRKKAAGRRR
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagccacagacgggaaggtgacctaccccccgggggtcaag
gagatctctgacaaaatctccaaagaggaaatggtccgcaggctcaagatggttgtaaag
accttcatggacatggaccaggactctgaggaagaaaaggagctctatctgaaccttgct
cttcacttggcctcagacttctttctcaaacacccagacaaagacgtgcgcctgctcgtg
gcctgctgtctagcagacatattcaggatttacgcccccgaggcgccctacacttctcca
gacaaacttaaggacatttttatgttcataacaagacagctcaaaggactggaagatacc
aaaagtgcccagttcaacagatacttctacctgctggagaacatagcttgggtgaagtcc
tacaatatttgctttgagcttgaagacagcaatgagatattcacccagctttacagaaca
ctcttccaggtcatcaacaacggccacaaccagaaggtgcacatgcacatggtggacctg
atgagctccatcatctgtgagggcgacaccgtctcacaggagctcctggacactgttctg
gtcaacctggtgcctgcacacaagaatttgaacaaacaagcgtatgacctggccaaagct
ttgctgaagaggaccgctcaagctattgaaccgtatatcaccaacttcttcaaccaggtg
ctgatgctgggaaaaacctccgtcagcgacttgtctgaacatgtgtttgacctcatcctg
gagctttacaacattgacagccacctgcttctgtcagtgttgccacagctggagtttaaa
ctcaagagtaatgataatgacgagaggctgcaggtggtgaagctgttggcgaagatgttt
ggagccaaggactcggagttggctgctcagaacaaaccgctctggcagtgctacctgggc
aggtttaatgacatccatgtgccgatcagactggagtgtgtgaagtttgcgagtcactgt
ctcatgaaccacccagacctggccaaagacctcacagattttttgagggtcagatcacat
gatccggaggaagccatacgccacgatgtcatcgtttctatagtaactgctgctaagaaa
gatttgtccctagtcaacgatgcattgctcaattttgtaaaggagagaacattggacaag
agatggcgtgtacgtaaggaggccatgatgggcctggcttccatctacaggaagtacgca
ctgcaaggagagggagggagagaggcgtccaaacagatctcctggatcaaagacaagctg
ctgcatatctactaccagaacagcattgatgacaggttgttggtggagcgggtgtttgcc
cagtacatggttcctcacaacctggacaccacagagagaatgaagtgtctttactacctg
tacgccactctagacacaaacgctgtcaaagctctgaatgagatgtggaagtgccagaac
ctgttaagacacaacgtcaaagacctgctggacctgatcaaaaaacccaagtctgaagca
tcaagcaaggctgtgtttgcaaaaatcatggtgattacaaggaacctgccagacccgggc
aaagctcaggactttgtgaagaagctggctcaggtcctggacgacgacgagcggattaga
gatcagctggaaacgctggtcagccccagctgctcctgcaaacaggcagaagtctgtgtg
cgagacatcactaaaaaacttggcagccctaaacaacccagcaatccgttcctggagatg
gtgaagttcctgttggagagaatcgctcccgtccacatcgacacggagtccatcagtgct
ttgataaaacaggtgaacaaatcgatagatgggacggctgatgatgaggaggaaggggtt
cctaccgaagaggcaatcagagcaggactggagctgctcaaggtgctgtccttcacccac
ccagtctcgttccactccgcagagacgtttgagtccttactgggctgtctgaagatggat
gatgagaaggtggccgaggccgcgctgcagatcttcaagaacaccggcagcaagctggaa
gacagttttcctcacatcaagtctgtgttacttccggtactgcaagccaaagctaagaga
gggccccctcgccaagccaagtacgccatccactgcatcaatgccatgttcactaacaga
gacacccacttcgctcaaatctttgagcccctgcacaaaggcctggacccggctaacctg
gagcagctcatcactcctctgaccacgctgggtcacctggcccagctggccccggagcag
ttcgctgctccgctcaaatctctcgtcgccaacttcattgtgaaggatctgctcatgaac
gacaggatccaagggaagaagacgactaagctctgggtcccagatgaagaagtgtctcca
gagactttagctaagatccagggcataaagctgatggtaaggtggttgctgggagtgaag
aacaaccagagcaaatcaggcaactccacgctgagaatgctgactgctatcttacacagc
gatggagacctaactgagcaaggcaggatgggtaaaccagacatgtcgaggctgcggctg
gcagcagcgtgtgccctgctgaagctggcgcaggagccctgctaccatgaaatcatcaca
ctggagcagtaccagctctgtgctctcgtcatcaatgacgagtgctaccaggtgcggcag
tgttttgcccagaagcttcaccgcggcctctgccgcctccgtctgccgctggaatacatg
gctatatttgctttatgtgcaaaggacccggttaaagaacggagggctcacgctcgccag
tgcctggccaaaaacgtcaacatccgtcgagagtacctcaaacagcacgctgctatcagt
gacaagctgttatcgctgctgccggagtatgtggtcccctacaccatccaccttctggct
cacgacccagactacgtcaaagtgcaggacatcgagcagctgaaagaaatcaaagaagct
ctttggtttgtcctggagattatcatggccaagaatgagaacaacagccacgctttcatt
agaaagatggtggaaaacatcaagcagacgaaagacggccagtcccccaacgatcccaaa
gacaacgagaaactgtacaccgtctgtgacgtagccatgcacatcattatgtcaaagagc
accacgtacagcctggagtccccgaaggacccggtgctgccgtcgcgcttcttcaccaaa
cctgacaagaacttcaacaacactaaaaattacctcccatcagagatgaagtccttcttc
acacctggaaagccgaagtcggctaacgttttgggtgcggtcaacaagccgctgtcatcg
gcaggtaaacagctccagagcaaagcctctcggatggagacgaccagcaaccacgactcc
tcgtctaacccgagctccccgcagcgcagcaagagcaggcatgacagcacagaaatggat
cacagtgaaaatgaggacatcagcctgaagagagcagacagtgttgacaaggatattgaa
aagccccgcggtcgtaaacgtggggtgaccaccagcgacgatcaggagagcaagccgaag
cgcgggcgcaagaaagccggcgccaacgcgtcggtggtggcggagccggaggacccgtgg
gacggggacacgcagcccgaggacgagcagaacagcccgcccaagaagggccgccggggc
cggccccccaaggccgccgccgccacacagaacacgcccgccaagggccggaggggccgc
aagaaggcagtcccctccccggaggaggaagaggaggaggaggaagaggaggaggaagag
agggcggaagaggaggcggtggaggaagacgaggaggaagacgaggacagaagtagtgaa
aacatggaggccaagactaagggagggagacaagccaggaccccccggcggtcacaaggc
agctcggagtcggcagagtccacaccacagaagaggagaggacgtccacccaaatcagct
cagccggcggccaagaaacccacgcgtgggggccggtcgaaggccgctgtggctaaagac
gaggaggaggaggaagaagaggaggaggaggaggagcaggaagacgagccaacaccaagg
ggtcgcaagaaggccgccgggcgaagaagatga
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