Cololabis saira (Pacific saury): 133459551
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Entry
133459551 CDS
T09849
Name
(RefSeq) neurobeachin-like isoform X1
KO
K24183
neurobeachin
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133459551
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
133459551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
WD40
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
133459551
NCBI-ProteinID:
XP_061595578
LinkDB
All DBs
Position
14:9076769..9251178
Genome browser
AA seq
3073 aa
AA seq
DB search
MSSEKPVSTAAPAPGSSSLLTAPDRGSEPGLPVPALPPPLAQAQQGSTITTTAGDRMVSA
AGSMVLPAGVINPAVPIRNIQMKFAVLVGLIQVGEVSNRDIVETVLNLLVGGEFDLETNF
IIQEAESIGCMVELLSHCEVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIQQVLLKMSTV
DDMIADLLVDMLGVMASYSITVKELKLLFSMLKGDNGIWPRHAIKLLSVLNQMPQRHGPD
TFFNFPGRSAAAIALPPIAKWPYQNGFTINTWFRQDPLNNINVDKDKPYLYCFRTSKGIG
YSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQL
VSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAIYVFSEALNPAQIFAIHQLGP
GYKSTFKFKSESDIHLAEHHKQVLYDGKLASSISFTYNAKATDAQLCLESSPRENASIFV
HSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDFKQLNDSSVDTSVCATLLVF
LVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLPHGAPL
LKQLCDHVLFNAAIWIHTPAKVQLSLYTYLSSEFIGTATIYSTIRRVGTVLQLMHTLKYY
YWALNPLECSGISPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYL
LTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVICKLLASKSESIRVQALKVLG
YFLKHLGHKRKVEIMHTHSLFTLLGERLMMHTNTVSVTTYNTLYEILTEQVCTQVVHKPH
PEPDSTIKIQNPMILKVVATLLKNSSPSAELMEVRRLFLTDMIKLFSNSRENRRCLLQCS
VWQDWMFSLGYINPKNPEEQKITEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVT
YEAHKEYLAKMYEEYQRQEEENMKKGKKGSVSTISGLSAAPAPVVNGNLEIDDNSQTQTP
ESEAEYSEGAGGDSRNLLAEGAVKRPNGEALAPGEQSVGPGVRVEVHDLLVDIKAEKVEA
TEVKLDDLDLSPEGLSGGVGGGGVGGGVGIENGPLVEVDSLLDSAYCSVVQNLNGNLPPK
DDAPGPGVGLGTGLGTGLGTGLGLAGVSLEDDGNMGPLITLADEKDSVPSNNGFLFSKVD
EKLLPALAATDPLVLPSPEQPSPAGPVPVPPHTSSTSSASDDLSLLAHMTGCGSDLTQAQ
SHAPGELPEDGPFKIQSPLADISSIAEAESQIQIQGAPRPDFPDGEGAAGAEGECSGLKT
GGDTASTTSDTERSDDGKDKDIRKIQTTTTTQALHGRTAAQLERDLRVDLGFRGMPMTEE
QRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDVHVWRSHSTKSVMDFVNSNEN
IIFVHNTIHLISQMVDNIIIACGGILPLLSAATSPSSSKSNANAKAGGAGPLRGSQGEEV
TPVPGGGGAGVETELENIEATQGMSSETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNM
SSGGLMRQCLRLVCCVAVRNCLECRQRQRDRTCKSSLTSSKSQDSLHSASSASKQDPDRL
LQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDILEPQREIGRSTSLSG
RSIRHEINSPTSTEHPSNAYSDKQTPTPVDDSPRAGLPHTDSGIGEEGHVAGSLNGSELG
LGLGLGLVGRETDRDRDRDIVGGGGGTDLLCSLSDVRRSQESLLDSPHNPGSTPGSGQAP
PSSISSISQTNKGINVKEILKSLVAAPIDGAELGQEFGPTPYHPDPALKTHPMLPMQFHS
FDRSVMVPVKKPPPGSLSVNTVGTPPTGGAATAGSTPNIFAAATATPKSMINTTGATDSA
SSSSSSSSSFVNGATSKNLPAVQTVAPMPEDSMENMSAYCEVGQCALRSGQTPPELKSFS
SLAGFQAAPRDAGQCFSITTKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEG
TGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANE
AEFILNRQRAEDVHKHAEFEVNKPTTMECWSNCAQYAADRREEEKMCDHLISAAKHRDHV
TANQLKQKILNILTNKHGAWGTMSQSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHADVS
LKALDDYGPEDEEDEQKSKKSYRSHSVVAQNPEAELMLEGDDDAVSLLQEKEIDNLAGPV
VLSTPAQLVAPVVVARGTLSITTTEIYFEVDEEDPTFKKMDTKVLAYTEGLHGKWMFSEI
RAVFSRRFLLQSTGLEVFMANRTSVMFNFPDPATVKRVVYSLPRVGVGTSYGLPQARRIS
LATPRQLFKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYDSEEL
DLTLPGNFRDLSKPIGALNPKRAAFYAEHYETWDDDSTPPYHYTTLYSTAHSTLMWMLRI
EPFTTFFLNGNEGKFDHPDRAFSGIGRAWRNCQRDTADVKELIPEFYYLPEMFVNSNEYE
LGVRDDAVPVCDVELPVWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAV
RGLNVFNFLSYEGAANLDNVDVMQREVIETQIQLCGQVPSQLLIEPHPPRSSAMHLCFLP
QSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLSIPAAVTVTCSRLFAVNRWHNTV
GLRGAPGYSLEQAHHLPIEMDPLIANNSGMNKRQITDLVDQSIQINTHCFVVTADNRYIL
VCGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYW
SGRHHIIGDNPNNSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDL
LRALEGPELCQRPRLISVSSEGHCIIYYERGRFCNFSINGKLLAQMEVNDSSRAILLSSD
GQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNI
DFNRWHYEHQNRY
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgagaagccggtttcaacagcagcaccagccccgggctcctcctcgctgctg
acggccccggaccgaggctcggagcccgggctgccggtccccgctctgccgccgccgctg
gcgcaggcgcagcagggctccaccatcaccaccaccgccggggacaggatggtgtccgcg
gccggctccatggtcctcccggccggggtcatcaaccccgccgtccccatcaggaatatc
cagatgaagttcgccgtgctggtgggcctgatccaggtgggggaggtgagcaaccgggac
atcgtggagacggtgctgaacctgctggtgggcggcgagtttgacctggagacgaacttc
atcatccaggaggcggagagcatcggctgcatggtggagctgctgtcacactgcgaggtg
acgtgccaggcggagatctggagcatgtttacggccatactgcgcaagagcgtgcgcaac
ctgcaaaccagcaccgaggtcggcctcatccagcaggtgctgctcaaaatgagcaccgtg
gacgacatgatcgcagacctgctggtggacatgctgggagtcatggccagctacagcatc
accgtcaaggagctgaagctgctcttcagtatgctcaaaggggacaacggcatctggcca
agacatgccatcaagctgttgtcggtgctgaaccagatgccccagagacacggtcctgat
accttcttcaactttccaggacgcagtgcagcggccatagcattgccaccgattgccaag
tggccgtaccagaacggattcaccattaacacctggttcagacaggatccgctcaacaac
atcaacgtggataaagataaaccgtacctgtactgctttcgcaccagtaaagggatcggt
tactccgctcacttcgtgggaaactgtctcattgtgacatcactgaagtcaaaaggaaaa
ggattccagcactgtgtcaaatatgatttccaacctcgcaagtggtacatgatcagcatc
gtccacatctacaaccgctggaggaactccgagatccgttgctatgtcaacggccagctg
gtctcctacggcgacatggcctggcacgtcaacaccaacgacagctacgacaagtgtttt
ctcggttcctctgagacggccgatgccaacagggtgttctgtggtcagctcggggctatt
tatgttttcagcgaagctctcaacccagcccagatctttgccatccatcagctcggccca
ggatacaagagcaccttcaagttcaagtcggagagcgacatccacctggcggagcaccac
aagcaggtgctgtacgatggcaagctggccagctccatctccttcacctacaacgccaag
gccacggacgcccagctctgcctggagtcctcgccccgggaaaacgcctccatcttcgtg
cactcgccgcacgcgctcatgctgcaggatgtgaaggccatcgttacccactccatccac
agtgccatccactccatcggcggcatccaggtcctgttcccgctctttgctcagctggac
ttcaagcagctgaacgacagcagcgtggacacgtcggtgtgtgctactctgctggtgttc
ctggtggagctgttgaaaagctccgtggccatgcaggagcagatgctgggagggaagggc
ttcctggtgatcgggtacctgctggagaagtcgtcaagggtccacatcaccagagctgtt
cttgaacagttcctgtcgtttgccaagtatctggacggtttacctcacggagcgccgctc
ctcaaacagctctgtgaccatgtcctcttcaacgccgccatctggatacacacccctgcc
aaggtccagctctccctgtacacatacctgtcatcggagttcatcggcaccgccaccatc
tactccaccatccggcgcgtgggcaccgtcctgcagctgatgcacaccctaaagtactac
tactgggctctgaaccctctggagtgcagcggaatctcccccaaaggtcttgatggaccg
cggccgtcccagaaagagatcatctccctccgagccttcatgctgcttttcctcaaacag
ctcattctcaaggaccggggagtgaaggaggacgagctgcagagcatcctcaactatcta
ctgaccatgcatgaggatgagaatatccacgatgtgctccagctgttggtggctctaatg
tctgagcacccggcgtccatgatccctgcgtttgaccagaggaatggcataagggtgatc
tgtaaactcctggcctccaagagcgagagcatccgggtccaagcactgaaggttctgggc
tacttcctgaagcacctgggtcataagagaaaggtggagatcatgcacactcacagtctg
ttcacactgctgggagagcggctgatgatgcacaccaacaccgtctccgtcaccacctac
aacactctgtatgagatcctgacagagcaggtctgcactcaggtggttcacaagccccat
cccgagcccgactccaccatcaagatccagaatcccatgattctgaaggtggtggccacc
ctgctgaagaactccagccccagtgccgagctgatggaagtcaggaggctcttcctcacc
gacatgataaaactcttcagcaacagccgcgaaaaccgccgctgcttgctgcagtgctct
gtgtggcaggactggatgttttccctcggatacatcaaccccaaaaacccagaagagcag
aaaatcacggagatggtgtacaacatcttcaggattctactctaccatgccatcaagtat
gaatggggagggtggagggtgtgggtcgacaccctgtccatcgcacactccaaggtgacc
tacgaggcccacaaggagtacctggccaagatgtacgaagagtatcagcgtcaggaggag
gagaacatgaagaagggaaagaaaggatccgtgtccaccatctccggtctgtcggccgcg
cccgcccccgtcgtcaacggcaacctggaaattgacgacaactcccaaacacagacgcct
gagagcgaggccgagtacagcgaaggggccggcggagactcgcgtaacctcctggcggag
ggcgcggtgaagcggccgaacggagaagccctggcccccggggagcagagcgtgggcccg
ggggtccgggtggaggtgcacgacctgctggtggacatcaaggccgagaaggtggaggcc
acggaggtgaagctggacgacctggacctgtctccagaaggcctgagcggcggcgtgggc
gggggcggtgtaggagggggggtggggatagagaacggacccttggtggaggtggactcc
ctcctggacagcgcttactgctctgtggtgcagaacctcaacgggaatctgccgcctaaa
gacgacgcgccgggcccaggggtgggactgggaaccggcctgggaaccggcctgggaacc
ggcctgggcctggcaggagtcagcctggaggacgacgggaacatggggcccctcatcacg
ctggctgatgagaaagacagcgttcccagtaacaacggctttctcttcagcaaggttgat
gagaagctgcttccagctctggcagccacagacccgctggtgctgcccagtccggagcag
cccagtccagcaggcccggtgccggtcccgcctcacaccagcagcaccagcagcgccagc
gacgacctcagcctgctggcccacatgaccggctgcggctcggacctcacacaggcccag
agccacgctcccggggagcttcctgaggacggacccttcaagatccagagtcctctggca
gatatcagctccatcgccgaggccgagagccagatccagatccagggagccccccggcca
gacttcccggacggagagggggcagccggggcggagggagagtgctcgggcctgaagacg
gggggagacaccgccagcaccacgtctgatacggagaggtcggacgatgggaaagacaag
gatataaggaagatccagaccaccaccactactcaggcgctgcacggccgcacggcggcc
cagctggagcgggacctgcgtgtggacctgggtttcaggggcatgcccatgacagaagag
cagcggcgccagttcagccccggcccgcgcaccaccatgttccgcatcccagagttcaag
tggtctcccatgcaccagcggctgctcacggacctgctgttcgccctggagaccgacgtg
cacgtctggaggagccactccaccaagtcagtgatggacttcgtaaacagcaatgaaaac
atcatcttcgtccacaacaccatccatctcatctcccagatggtggacaacatcatcatc
gcctgtggaggcatcctgcccctgctgtcggccgccacctccccctctagttctaagagt
aatgccaacgctaaggcaggaggagccgggcccctgaggggctcacagggagaggaggtg
acccctgttcctgggggaggaggcgcaggggtggagacggagttggagaacatcgaggcc
acgcaggggatgtcctcagagacggcggtcaccttcctgtcccgtctcatggctatggtg
gacgtgctggtgttcgccagctccctgaacttcagcgagatcgaagcggagaagaacatg
tcgtcaggagggctgatgaggcagtgcctccgcctcgtttgctgcgtagcagtgaggaac
tgcctggagtgccggcagagacagagagatcgtacgtgtaagtcgtcattaaccagcagc
aagtcccaggacagcctccacagtgcctcctccgccagcaagcaggatccagacagactc
ctgcaggatgtcgacatcaatcgtctgcgagctgtggttttcagagatgttgatgacagt
aagcaggcccagtttctagcgctggcagttgtttacttcatctccgttctcatggtgtct
aagtaccgagacattttggagcctcagagagagattggcagatctacgagcctatcaggg
agaagcatccgccacgagatcaactcccccaccagcacagagcacccgtccaacgcctac
tctgacaaacagacccccacgccggtggacgactccccgcgggccggcctcccccacacg
gactcgggcatcggggaggagggccacgtggccgggtccctgaacggatcagagctgggg
ctggggctggggctgggcctggtgggccgggagacggacagggacagagacagagacatc
gtagggggagggggaggcacggatctgctgtgcagtctgtctgacgtccggaggtcccag
gagagccttctggattccccccacaaccccggctccaccccgggctcgggccaggccccg
ccctcctccatctccagcatcagtcagacaaacaaaggcatcaacgtgaaggagatcctg
aagagtttggtggcggctcccatcgacggcgcagaattaggacaggagtttggaccaacg
ccgtatcacccggaccccgccctgaaaacgcaccccatgctgcccatgcagttccactcc
ttcgacaggagtgtgatggttccagtgaagaagcccccacccgggagcctgtcagtcaac
accgtgggcacgccccccaccggcggagcggccaccgccggcagcacacccaacatcttc
gctgctgcaacagcaacacccaagagcatgatcaacaccacaggtgcaacagactctgcc
tcctcctcttcctcctcctcttcatcgtttgttaacggtgcgaccagtaagaacctgccg
gcggtgcagacggtggcccccatgccagaagacagcatggaaaatatgagtgcctattgt
gaggtggggcagtgtgccctgcgcagcggtcagaccccccctgagctaaagtcttttagc
tctctggcaggcttccaggcagcccctcgagatgcaggacagtgttttagcatcaccacc
aagctggagcgagcgctggagaaggtggcccctctgctgagggagatcttcgtggacttc
gctcccttcctgtccaggacgctgctgggtagccatgggcaggaactgctcatagaaggt
acaggtctggtgtgcatgaagtccagcacgtcggtggtggagctggtgatgctgctctgt
tctcaggagtggcagaactccatccagaagaatgccggactggccttcattgagctcatc
aacgaggggagactgctgtgccacgccatgaaggatcacattgtgcgtgtggccaacgaa
gccgagttcatcctgaaccgccagagggccgaggacgttcacaaacatgccgagtttgag
gtaaacaagcctactacaatggaatgctggtccaactgcgcccagtacgccgccgatcgg
agggaggaggagaagatgtgcgaccacctcatcagcgcggcgaagcacagagatcatgtg
actgccaaccagctgaaacagaagatcctcaacatcctgaccaataagcacggagcatgg
gggaccatgtcccagagccagctgcatgacttctggcgcctggactactgggaggacgac
ctgaggaggagacggaggttcgtgcggaacgccttcggctccacgcacgccgacgtgtcg
ctcaaggctctggacgactacggtccggaggacgaggaggacgagcagaagtccaagaag
agctaccgcagccactcggtggtggcccagaacccggaggcggagctgatgctggaggga
gacgacgacgccgtcagcctgctgcaggagaaggagatagacaacctggctgggccggtg
gttctgagcacgcctgcccagctggtggctccggtggtggtggctcggggaactctgtcc
atcaccaccacggagatctacttcgaggtggacgaggaggaccccactttcaagaagatg
gacactaaagtgctggcgtacacggagggtttgcacggcaagtggatgttcagcgagatc
cgggccgtgttctccagacgcttcctgctgcagagcaccgggctggaggtctttatggcc
aacagaacgtctgtgatgttcaacttcccggacccggccacggtgaagagggtggtgtac
agtctccccagggtgggggtgggaacgagctacggccttccacaagccaggcgtatttcc
ttggccacccctcggcagctcttcaagtcctccaacatgactcagcgctggcagagaaga
gaaatctccaacttcgagtacctcatgtttctcaatactattgcagggaggacctataat
gatctgaaccaataccccgtcttcccctgggttctgaccaactacgactcggaggagctt
gatctcactctgcccggaaacttccgagacctttccaagccaatcggtgccctgaatccg
aagcgagcagcgttttatgcagagcactacgagacgtgggacgacgacagcacgcctcct
taccactacacaaccttgtactccaccgctcactccacactcatgtggatgctcagaata
gaacccttcaccacatttttcctcaacggtaacgaggggaagtttgaccatccagacaga
gctttctctgggattggccgtgcgtggaggaactgccagagagacacggccgacgtcaag
gagctgatcccggagttctactacctgccagagatgtttgtcaacagtaacgagtacgag
ctcggtgttcgtgatgatgccgttcctgtctgtgatgtggagcttcctgtctgggccaag
aagcccgaagactttgtccgcattaaccgcatggcgttggagagtgagtttgtgtcctgc
cagctgcaccagtggatcgatcttatattcgggtacaagcagagagggccggaagcggtc
cggggcctgaatgtcttcaacttcctgtcgtatgagggagcagccaacttggacaatgtg
gatgtcatgcagcgtgaggtgattgagacccagatccagctctgtggtcaggtcccgtct
cagctgctcatagagccgcacccgccgcgctcgtccgccatgcacctgtgtttccttccc
cagagtcctctgatgtttaaggatcagatgcagcaggacgtcatcatggtgctcaagttc
ccctccaactcccccgtcacgcacgtcgctgccaacacgctcccccacctcagcatcccg
gccgccgtcaccgtcacgtgcagccggctgttcgccgtcaaccgctggcacaacacagtc
ggcctccgtggcgccccaggatactccctggagcaggctcaccatctgcccatcgagatg
gaccccctcatcgccaacaactcaggcatgaacaagcgtcagatcacagacctggtggac
cagagcatccagatcaacacgcactgcttcgtggtgacggccgacaaccgctacatcctg
gtctgcggcttctgggacaagagcttccgcgtttactccactgaaactgggaagttgacc
cagatcgtgttcggccactgggacgtggtgacgtgtctcgctcggtcagagtcctacatc
gggggagactgctacattgtgtcaggctccagagacgccactcttcttctgtggtactgg
agcgggcgacatcacattataggggacaaccccaacaacagtgactaccccgcccccagg
gcggtgctgacgggccacgaccacgaggtggtgtgtgtgtctgtctgtgctgagctgggc
ctggtcatcagtggagccaaagagggcccgtgcctggtccacaccatcaccggggacctg
ctccgggccctggagggccccgagctgtgccagcggccgcggctcatctccgtatccagc
gagggccactgcatcatctactacgaaaggggccgcttctgcaacttcagcatcaacggg
aagctgctggcgcagatggaggttaacgactcctcacgggccatcctgctgagcagcgac
gggcagaatctggtgaccgggggggataacggcgtggtggaggtgtggcaggcctgcgac
ttcaagcagctgtacatctacccgggctgcgacgccggcatccgggccatggacctctcc
cacgaccagaggactttgatcaccggcatggcgtccggcagcatcgtggcgttcaacata
gacttcaaccgctggcactacgaacaccagaacaggtactga
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integrated database retrieval system