Cololabis saira (Pacific saury): 133459557
Help
Entry
133459557 CDS
T09849
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133459557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133459557
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133459557
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
133459557
NCBI-ProteinID:
XP_061595608
LinkDB
All DBs
Position
14
Genome browser
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKMGNTTIIC
GIKAELANPTVEAPAKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFVADVIESSEVIK
AEDLCIDRGKLCWVLYCDIMCLDYDGNILDACIIALLAALKNTRLPEITINKDTCAPEVN
LKVRHGLHVHKHPVGTSFCVFDDSILIVDPTADEERLATAQLSVVTDEEGRLCSVHKPGG
VSLSAEKLQDCISRATLRQKEIQKLIDKVVNSVTTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagactgcggagcctctggagtatcacaggagttttctgaaagaa
aactgccggccagatgggcgggagctgtctgagttccgaaccacaactctgaacataggg
tccatatccacagctgacggctcagccctggtgaagatgggaaacaccaccatcatctgt
ggcatcaaagcggagctggcaaaccctacagtggaggcacctgctaaaggttacattgtg
cccaacgtggacctgccgccgttgtgttcgtcgcggttccggcccggccctccaggagaa
caggcccaggccgccagccagttcgtcgctgacgtcattgaaagctcggaggtgatcaag
gcggaggacctgtgcatcgacagggggaagctctgctgggtgctctactgtgacatcatg
tgtctcgactatgatgggaacatcctggatgcttgtatcatcgccctgctggctgctctc
aagaacacacgactgccagaaatcaccatcaacaaagacacatgtgcaccagaggtgaat
ttaaaagtgagacacgggctgcatgttcacaagcatccggttgggacctctttttgtgtc
tttgatgactccatactgatcgtagaccccacggcggatgaagagcgcctggccaccgcg
cagctctccgtggtgacggacgaggagggccgactctgctccgtacacaaaccaggtggg
gtttcgctgtcggcagagaagctgcaggactgcatcagccgggcaacgctacgacagaaa
gagatccagaaactcatcgacaaagttgtaaacagtgtcacaacagcacaataa
DBGET
integrated database retrieval system
