Cololabis saira (Pacific saury): 133459622
Help
Entry
133459622 CDS
T09849
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133459622 (supt6h)
03036 Chromosome and associated proteins [BR:
csai03036
]
133459622 (supt6h)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133459622 (supt6h)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
133459622 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
Tex_N
DUF7798
Motif
Other DBs
NCBI-GeneID:
133459622
NCBI-ProteinID:
XP_061595737
LinkDB
All DBs
Position
14:12753080..12773733
Genome browser
AA seq
1783 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFLEEDDEEEDADNPEEQDEHGNLRGLINDGDE
EAEEEEEEQPRRSGSASGGASDSEEEVRHRRKKRNYHEYLDEEDLDLIEENLGVKVKRRK
KKYDRVKTLDDDEEDDDEKDLIADEIFHGDAEGELEEGEAVEEPLPQADDDEEGEDEESD
IDDFIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQ
DEEGWDRPKKQTKRRLGRKSIFELYEPSELESSHMTDQDNEIRTTDMPERFQLRSIPVKP
AEDDELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRN
QQFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQYEQI
SADPDKPLADGIRPLDTSDMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKSTKKR
IKKIKEVSEYGEEEELEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQF
GENLRDSYQRHETEQFPAEPLELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHVL
RQTFQERAKVNIKPTKKGKKEIDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEEEGLLS
IDICIDLLGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLNQFLYPQMA
KELKSKLIAEAKESIVRSCCRRLYNWLKVSPYRPDQQVEEDDDLMDESQGKGIRVLGVAY
APSRDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKANDIESLKKFLSSKKPH
VVAVAGETRDAQMIMEDIKRAVGELEQESSLPAVGVELVDNELATLYMNSKKSEADFRDY
PPLLRQAVSVARKIQDPLMEYAQVCSTDEDILCLKLHPLQEQVVKEDLLCALYCEFINRV
NEVGVDVNRAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPK
VFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPA
GALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNT
EEVFNMLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNF
PELSEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCR
IMKIDIEKFSVDLTCRTSDLMDKGNEWKLPKDSYYDFDMESEDQKHDEELKKKQQRTPYI
KRVIAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREE
GKENAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNGGSKEKMEEV
LVRIKREKPTFIPYFISACKELPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNG
LFRWFKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNA
IAAVTGQGQNPNTTPAQWGSSQYGYSGSTGGGGGSSSAYHVFATPQQPIATPLMTPSYSY
TTPSQQALGTPQYPGSTPQSSHSHAHPHLHHHGHHGHHSSHHGHASGTPSSTSSRGRTPQ
QQQQQQQQPQPPQQQQPPQQQPKPSSSSSTSGGGGVGSSNSNNTSSSAVDWGKMAEQWLK
EKEAEGRKKTQRMTPRPSPSPMIESTPMSHAGDATPLLDEMDR
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattttattgagagtgaggcagaggaatcggaggaggagtttgaggagaaggac
ctgaagcccaagaagacccagaggtttttggaggaagatgatgaagaagaagatgctgac
aacccggaggaacaggatgagcatggaaatttacgtggtctaattaatgatggagatgag
gaagcagaggaggaggaagaagaacaacccaggagaagtggaagtgcaagtggaggggca
agcgattcagaggaagaagtgaggcatcgacgtaaaaagcgtaattatcacgaatacctg
gacgaggaggatctcgatctaattgaggaaaatttgggtgtcaaagtgaaaagaaggaag
aagaaatatgaccgtgtaaaaacacttgacgatgacgaagaagatgacgatgagaaggat
ttgatcgctgatgagatatttcatggggatgctgagggtgagctggaggaaggagaagct
gtcgaagagccgctcccgcaagcggatgatgatgaagaaggggaggatgaagagtcagat
atagatgattttattgtagatgatgatggccagcccatcaccaagaagagaggcaagaag
ttctcaggatacacagatgcagccctccaagaggcccaggaaatttttggtggggacttt
gactttgctgactttgatgctgacgcttatgaccagggtgaagaggaagaagaagatcaa
gatgaagaggggtgggaccgaccaaagaaacagaccaagaggaggttggggagaaagagc
atttttgaactctatgagcccagtgagctggaaagcagtcacatgactgaccaggacaat
gagatccgaaccacagatatgcccgagaggttccagttgcgatctatccctgtcaaacct
gctgaggacgatgagctggaagaggaggcagagtggatctttagacatggcttctccact
ctgaccatctccatgcaggaaagcacagattacctcgacagaggaacaaccacaaatttc
agcaggaaaggccccagcaccattgctaaaatcaaagaggcactcaatttcatgagaaat
caacagtttgaggttccgttcatagctttctatagaaaggagtacgtggagccagaacta
aatatcaatgacctgtggaaggtgtggcagtgggacgaaaagtggactcagctgaagacc
cggaagcagaacctgacccgtctatttcagaagatgcaatcttaccagtatgaacagatc
tctgctgatcctgataaacctttggctgatggcatccgccccttggacacttctgacatg
gaaaggttgaaagatgtccaaactcttgaagaactgggtgatgtgtacaatcactttttg
ctctactatggacgagacatccccaaaatgcagaatgctgcaaaatccaccaagaagagg
atcaaaaagatcaaagaagtctcggaatatggtgaagaggaggaactggaagttgaagaa
gaggaagaacagaaaggccctgatctcaagttggcatctcgtagggatatgtacagcatc
tgtcagagtgtgggacttgatggcctggctaaaaagtttggattgactccagaacagttt
ggagagaacctccgagacagttaccagcgtcacgagacggagcaattccctgctgagcct
ttagagctggccaaagattatgtttgcagccagttctccacccctgaggcagtgctagaa
ggaactaggtatatggttgccatgcagattgctcgagaacctctcgtcagacatgttctc
cgtcagaccttccaggagagggccaaggtcaacatcaaacctaccaagaagggcaaaaaa
gaaatagatgaggctcattttgcatactccttcaagtaccttaagaacaaggctgtaaag
gagctgaatggtgatcagttcttgaagatgtgcctggctgaggaagagggacttctgtcc
attgacatctgtatagacctattaggagtcaaagggtacgctggggaccagacatatttt
gatgagatcaaacagttctactacagggatgagttcagtcaccaggtgcaggagtggaac
agacagcgaactctagccatagagagatctctcaatcagttcctctaccctcagatggcc
aaggagctcaaaagcaaactgatcgctgaggccaaagagagcattgttaggtcctgctgt
cgaaggttgtataactggcttaaagtgagtccttacaggccagatcagcaggttgaggaa
gatgacgacctgatggatgagagtcagggaaaaggcattcgggtgttgggagttgcctat
gcacctagcagagatacaccagttttctgtgctctgatcaacggggaaggagaggtggtg
gactttcttcgtctaccatatttcatgaagaggaggaatgcatttagggaagatgagaga
gagaagaaggccaatgatattgaaagtctcaagaagtttctgtccagcaagaaacctcac
gttgtagctgttgctggagaaacccgagatgctcaaatgatcatggaggatataaagagg
gcggtcggtgaacttgaacaggagtcgtctttgcctgccgttggagtggaacttgttgac
aatgaattggcaacactgtacatgaacagcaagaagtcagaggctgattttagggattac
cctcccttgctgcgacaggctgtttcagtagccaggaagatccaggatcccctgatggag
tatgctcaggtctgcagcactgatgaagacattctttgcctcaaattacacccgctgcag
gaacaagtggtgaaggaggatttgctttgtgctctctactgtgaattcatcaaccgtgtt
aatgaggtcggagtggacgtgaacagggccattgcccatcctcatacccagagcctggtc
cagtatgtttgcggtttaggaccaaggaagggttcccacctgctaaagattctaaagcaa
aacaacactcgtctagagaacagaacgcagctggtcacaatgtgtcacatgggtcccaag
gtttttattaactgtgctggtttcatcaaaatcgacactgcatcactcggagacagtacg
gattcttacatagaggttctggatggttctcgagtccaccctgaaacatacgagtgggct
cgcaaaatggctgttgatgcccttgagtacgatgagtctgcagaagatgcaaaccccgct
ggggctctggaggagatcctggaaaatccagaacgtctgaaagatctggatctggatgcc
tttgcagaggagcttgagagacagggttatggcaacaagggaattaccctgtatgacatc
cgtgcagagctgagctgcaggtacaaagacctgagagttgcctacagagtccccaacaca
gaggaggtcttcaacatgctcaccaaggagactccagagaccttttatatcggaaaattg
atcacaagcattgtaactggtatcgctcaccggcggcctcaaggagagagctacgaccag
gccatccgtaacgacgctacaggcttgtggcagtgtcctttctgccagcaggacaatttc
cctgaactcagtgaggtatggaatcactttgacagcggctcttgtccaggccaggccatt
ggggttcgatccagattagataatggtgtccagggattcattcccaccaagtttcttagt
gataaagtggttaaacaccctgaggagagggttaaggtgggcatgactgttcactgtcgt
attatgaaaatcgacattgaaaaattcagtgttgacctcacgtgccgaacttcagatttg
atggacaaaggtaacgagtggaagctccctaaagacagctactatgattttgacatggag
tctgaggaccagaaacacgacgaagagctcaagaagaaacagcagcgaacaccgtatata
aagcgtgtgatcgctcaccccaacttccacaatatcagctttaaccaagcagaaaagatg
atggagaccctggaccagggagacttgatcatcaggcccagcagcaagggagagaaccat
ctaaccgtcacctggaaagtggctgatggaatctaccaacatgtagacgtgcgggaagaa
ggcaaagagaatgcgttcagcttaggacacactctctggatcaataatgaggagttcgag
gatctggatgaaatcactgctaggtacattcagccaatggcatcatttgcacgagatctg
ctgggacacaaatatttccaggagtgcaacgggggaagcaaggagaaaatggaggaggta
ttggtcaggataaagagggagaagcctactttcattccttactttatttcagcgtgtaaa
gaattgccggggaaattcatactgggctaccagcctcgaggaaaacctcggatcgagtat
gtgaccatcaccccggatggcttccgctaccgctcacagatattccctacagtcaatgga
ctattccgatggtttaaggaccattatcaagagccagtgccaggcatcactccttccaac
agcagccgcacaaggacacctgcatccctgaatgccacaccagctaatataaacattgca
gacttgacacgagctgtcaacgcccttccaaggaacatgacttctcagatgttcaatgcc
attgctgcagtcacaggccaaggccagaaccccaacaccacccctgcacagtggggctcc
agccagtacggatacagtgggagcacagggggcggaggagggagctcctctgcttatcac
gtattcgctacgccccagcagcccattgcaaccccattgatgacacccagctactcctac
acgacgccgagccagcaggccctggggacaccgcagtacccgggctccaccccgcagtct
tcccactcacacgcacacccacacctgcaccaccacggccaccacggccatcacagcagc
catcatggccacgcgtcgggcacgccatcctccacatcatcccgaggccggacgccgcag
cagcagcagcagcagcagcagcagccgcagccaccgcagcagcagcagccaccgcagcag
cagccaaagccgagcagcagcagcagcaccagtggtggcgggggcgtcggcagcagcaac
agcaacaacacctcctcctctgcagtggactggggtaagatggctgagcagtggctgaag
gagaaggaagcagagggtcggaagaagacccagaggatgacgccgcgcccgtcgcccagc
cccatgatcgagagcacacccatgtctcacgccggagacgccacacccttgctggatgaa
atggaccgatag
DBGET
integrated database retrieval system
