Cololabis saira (Pacific saury): 133459689
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Entry
133459689 CDS
T09849
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133459689 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133459689 (taf6)
03036 Chromosome and associated proteins [BR:
csai03036
]
133459689 (taf6)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133459689 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
133459689 (taf6)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133459689 (taf6)
STAGA complex
133459689 (taf6)
TFTC complex
133459689 (taf6)
SAGA complex
133459689 (taf6)
SLIK complex
133459689 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
Bromo_TP
CatAgl_D1
CBFD_NFYB_HMF
Apc5_N
Motif
Other DBs
NCBI-GeneID:
133459689
NCBI-ProteinID:
XP_061595864
LinkDB
All DBs
Position
14:complement(15293377..15299321)
Genome browser
AA seq
637 aa
AA seq
DB search
MAEERRQKQCSVSLPTESMKAMAESMGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTGDIDNALKLKNVEPLFGFQAQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSMKAHWLSIEGVQPSIPENPPPVTKEQQKTESTEPLKVVKPGQEEEGKIQG
KGQNSTTPDGKGKDKGLIRLKSRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELLPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKT
QWTARYGSIAGLAELGPDVIKTLILPRLAVEGARIKAVMEGLVVSNIDRIGAEHVQSLLL
KHCASVIAKIRPQPDIVEQYRTEYGYLGPMLCSHVMKARTQAALQAQQVNRTTLTITQPR
PTLSVSQSGLSGSAGSRTPSIIKVPSSLTLMSPRPGTPTQPSPPATKYIVMGTSAGSAST
QQVITLSSSGSASSVTSTVPSATSTLQPLVKLESSGPGLTTSRPLQKYIVVSLPSSASSS
LETKSSVLPASVSSTPLDTGMKLERSESPGASTQSPH
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaacgtcgacagaagcagtgttcggttagcctgcccacagagtcaatgaag
gccatggcagagtcgatgggggtcgggcagttacaggaggaaagctgcgcggccctcagt
gaggaggtcagctacagaataaaagaaattgcacaggatgctctgaaattcatgcatcac
gggaagaggcgtaaattaaccactggtgatatagacaatgcactcaagctaaaaaatgtg
gagcccctatttgggttccaggcgcaggagtttattccttttcgttttgcaagtggtggt
ggaagagagcttcatttctatgaggaaaaggaggtcgaccttagtgacattataaacaca
ccgctccccagagttccactagatgtttccatgaaagctcactggttaagtattgaaggg
gtgcagccttcgattccagaaaatccaccaccagtcacaaaagagcaacaaaagactgaa
tctacagagcccctgaaagttgtcaagcccggtcaagaggaggaaggtaaaattcaaggc
aagggacagaattcaacgactcctgatggcaaaggaaaagataaaggtctcatcaggttg
aaatcgcgcagcactcatgagctgtctgttgaacagcaactctactacaaggaaatcaca
gaagcgtgcgttggttcctgtgaagctaaaagagcagaagccttacagagcattgctact
gatccaggattgtatcagatgcttccgagattcagtacattcatttctgaaggggttcgt
gtaaatgttgttcaaaacaacttggctctgctgatttatctcatgaggatggtcaaagca
ctaatggataaccccaccctgtatttggaaaaatatctacacgagctcctcccagctgtg
gtcacctgtattgtgagtaagcagctgtgtttgcggccagacgtcgacaaccactgggcg
ttacgagactttgctgcccgcctgatggcccagagttgcaaaaccttcagtacaacgacc
aacaacatccagtcccgtataaccaagacttttaccaagagctggttggatgaaaaaacc
cagtggacggcgcgatacggctccatcgccggacttgctgaactgggacctgacgtgatc
aaaacgctgatccttcctcggcttgctgtagagggtgctcgcatcaaagccgtgatggaa
ggactcgtggtctccaacatcgataggataggggctgaacatgttcagagcctcttactg
aaacattgtgccagtgttatcgccaagatacgaccccagcccgacattgtggagcagtac
cggacagaatacggctacctgggacccatgctctgctctcatgtgatgaaggccagaacc
caggcagcactgcaggctcagcaagtcaacagaaccaccttaacaatcacacagcctcgc
cccaccctttcagtctcacaaagtgggttgagtgggtcggcagggtcccgcactcccagc
atcattaaggttccaagctccctcaccctcatgtccccgagaccgggcaccccaacacaa
ccgtctcccccggcaaccaaatacatcgtaatgggaaccagtgcaggatctgcttcaact
cagcaggtaatcactcttagctcctcggggtcggcctcctcggtaacgagcaccgttccc
agtgcgacctcgacgttgcagcctttggtgaaactggagtccagcggtcccggactgacg
acttcacggcctctgcagaagtacatagtcgtgtctctgccctcgtccgcttcctcctcc
ttggagaccaagagctccgtgttaccagcctcggtttcttcgaccccgctagacacgggg
atgaagctagagcggtccgagtctcctggagcaagcacacaatcacctcactga
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integrated database retrieval system
