Cololabis saira (Pacific saury): 133459715
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Entry
133459715 CDS
T09849
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule DSCAML1-like
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133459715
Cell adhesion molecules [BR:
csai04515
]
Immunoglobulin superfamily
DSCAM family
133459715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
Interfer-bind
Receptor_2B4
Sp38
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
133459715
NCBI-ProteinID:
XP_061595919
LinkDB
All DBs
Position
14:complement(16143663..16213429)
Genome browser
AA seq
2111 aa
AA seq
DB search
MRGSVGKRGGDMGGAEAPLVSPPRAAGQQGWKDLRGEQSPVQHGDLPGPKHAPRTHQDCQ
IFLKNISAIYGMWLVTLLLLYSLQEVHSEDVVSTRLYFVNASLQKITYSSSVGVSLPCPA
GGTPSAILRWYLATGDDIYDVPHIRHVQANGTLQLYPFSPSAYNSYIHDNDYFCTAENQA
GKIRSPNIRIKAVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIV
PGNRFSLTSFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTIL
DSFQAGEVQAGQSVELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDS
GSYACEVTNSFGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTITWF
RNTESIVPDQHISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPR
IVSSFSERVVNPGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSH
VNVSSPLIRDGGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVI
GYPYYSIKWLKDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTV
HVTVKVPPLIQPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIET
KEFMSSLQISKVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAG
VLNCSVEGYPPPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLC
QASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDT
VIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQA
NIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVVLQPMTSQSIRVTW
RAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYR
VVFWSLFPDGEWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTR
EDLPGPPAGIKAVPSSPSSVVVSWLPPLKPNGVIRKYTIYCSSPGSGQPAPSEYEANPGM
LSYRITHLTRGKQYHIWAAAVTTAGRGNISAKVTVEPAGKVPAKILSFGGTVTTPWMKEV
RLPCSSVGEPAPTIKWTKDSEDSAMPVTADSQRLILSNGTLVLRSVKAEDSGYYTCTATN
TLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEE
WRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQPL
LTHINSTHAGLNLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTNQLFLSELREATWY
ELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTLGVA
LLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLLIE
DKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPGTN
PVSXKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGSHGITATESDSYSASLS
QDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGT
NDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPLYMKTD
PFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPCKQQALTLGHSGLSSLGA
SSGTATLPQRTLTMPSSNAAATASTSSTGSNPASSNKVGGSRDSLLESSSSALGRLQKQS
VGAYSKSYTLV
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtagtgttgggaagagaggaggggacatgggcggggcggaggcgcctctcgtc
tcccctccacgcgcagcggggcagcagggctggaaagacctccggggagaacagtcgcca
gtccagcacggagacctgcctggaccaaaacacgcgcctcgcactcaccaggattgccaa
atattcctgaaaaatatatctgctatttatggcatgtggcttgtaactttactcctgctg
tactctctccaagaagtacacagtgaggatgtggtctctaccaggctttactttgtgaat
gcctcgctgcagaagataacctactccagctcagtgggggtgtccctgccctgccccgca
ggcggcacccccagtgccatactgcgctggtacctggccaccggcgacgacatttacgac
gtgccccacatccgccacgtgcaggccaatggcaccctccaactgtaccccttctcgccc
tccgcctacaacagctacatccacgacaacgactacttctgcactgccgaaaaccaggcc
ggcaagatccgcagccccaacatccgcatcaaagccgttttcagggagccctacaccgtg
cgggtggcggaccagcgctcgatgcggggcaacgtagccgtgttcaagtgcctcatcccc
gccgccgtgcaggagtacgtcagcgtcgtgtcctgggaacgagacaccgtctccatcgtt
ccaggtaacaggttctcgctgacatccttcggggctctttacatctctgacgttcagaag
gaggatgccctctccacatatcggtgcatcaccaagcataagtacagcggcgagacacgg
caaagcaacggagccaggctgtctgtaatggatcccaacgagtcctcgcccaccatcctg
gacagtttccaagccggggaagtgcaggcaggtcagagcgtggagctcccctgcatagcg
ggtggttatcccagtcccactgtgcgctggctgaaagacggccgcccgctgccctcagac
gcccgctggacacggcgcttgacgggcctgaccatcagtgacttgaggcaagaggacagt
ggaagctatgcctgcgaggtcaccaacagctttggctccaaggaggtgtccgggcagctt
catgtcatagatcctctgcgagtgaccttgtctccgaagaacctgaagacgggcatcagc
agcaccttgttcttcacctgcaccgtggaaggctctccagaatacaccatcacctggttc
aggaacaccgagtccatcgtccccgaccagcacatctccatccaggggcagcacaacgac
accctgcagatcaccgcggcgcaaaagttccactccggggcctaccagtgcttcgcctcc
cgaaagggccacaccgctcaggacttttccattattctccttgaggacggtacgcctcgt
attgtgtcttccttcagcgagcgggtggtgaaccccggcgagccgttctccctcatgtgc
gctgccaaaggggccccgcccccgtccatcacctggacgctggacgacgagccggtggtg
cgagactccacctacaagaccagccagtacacgctgtcggacggcctcaccgtgtcccac
gtcaacgtcagcagcccgctcatccgggatggaggggtgtatcgttgcgtcgcacgcaac
tcggccggcagcgccgagtaccaagcgcgcataaacgtaagaggtccacctcgaataaga
cccatgcgagacatcaccgcagtggcaggcaggaacacctacatcacgtgccgtgtcatc
ggctacccgtactactccatcaagtggctgaaggacggcatgcagctgcccgataatcac
cgtcaggtggtgttcgagaacggcacgctgaggctgacggacgtgcagaagggcgccgac
gaggggacgtacttgtgcagcgttttgatccagccccaggtctccatcaaccagactgtc
cacgtcaccgtcaaagtgccgccgctcatccagcccttcgatatcccctctacctcggtg
gggaagctcatgtacatcgcctgcgtggtgtcgtccggggacatgcccatacgcatcacc
tggcacaaagacggccagctcatcgtgccaggatccgcctctggcgttgcaatagagacc
aaagagttcatgagctccctgcaaatctccaaggtgacactgaagcacaatgggaactac
acgtgcatcgccagcaatgctgctgccaccgtcagctgggagagacagctgatcgtcact
gtgccccctcggtttgtggtgcagcccaacaaccaggactgcatatatggtaaagcggga
gtcctgaactgctctgtggagggttacccgcctccaaaagtcatgtggaaacatgccaaa
ggtgtcggaaacccacagcagtaccatcctgtcccacttactggccgcatccagatcatg
tcgaacggctctctgctcatccgacacgttctggaggatgacagagggtactacctctgt
caggcctccaacggcgtgggctcagacatcagtaaaagcatgatcctcaccgtcaagatt
cccgccatgatcaccagccaccccaacaccaccatggcgaggaagggccaaaccaaggag
ctgaactgcacggcgcggggcgagcagcccatcatcatccgctgggagcgaggagacacg
gtcattgatgcagagaggaacccccgctactccatcaccatcaacaagaagggggatgaa
gtcatctccaccctaaagctgaatccggctgagcgaggagattctgtcttcttttcctgc
catgccatcaactcctacggagagggtcgagggctcatccagctcacagtgcaagagccg
ccagatccccctgagctggaagtgagggaggtgaaagacaggagcatgaacctgcgctgg
atccaaaggtttgatggcaacagcatcatcaccagctacgacattgagtacaagaacaag
tcagattcgtgggatcacatgtacacaaccaggaacatctcccccacaaacaatcaggcc
aacatcgtggagctgcacccggcctgcgtgtacagcatccgcatgtactcgtacaacaag
atcggccgcagcctgcccagcaaagagctcaccatcagtaccgaggaagcaccacccgac
ggcccgccgatggacgtcgtcctccagccgatgacgtcacagagcatacgagttacatgg
agggccccgaagaaagagctccagaacggggtgatccgcggctaccagatcggctacagg
gagaacggccccggcagcaacggccagtacagcatcgtggagatgaaagccaccggcgac
agcgaggtctacactttggacaacctgaagaagtttgctcagtacggagtcgtggtccaa
gcctttaaccgagccgggaccggcccgtccagcacggagatcaacgccaccacgctggaa
gatgtgcccagcgagcccccgcagaacgtgagggcgatctcagtgacgtcggacgaggcc
gtcatcacgtgggcggagcctccacggctgacgctgcacggcgtgctgaaaggctaccgg
gtcgtgttctggtccctcttcccagacggagagtggggagaaatgcagaatatcaccacc
acccgtgagcaggtggagctgcgggggctggagaagttcaccaattacagcgtccaggtt
ctggcttacactcaagccggggacggcgtccgcagcaacgtcctgtacatccagacccgg
gaagaccttccgggtcctccggcgggcatcaaggccgtcccctcgtctcccagcagcgtg
gtcgtgtcctggctgccgccgctcaaacccaacggcgtcatccgcaagtacaccatctac
tgctccagcccgggatccggacagccggcgcccagcgagtacgaggccaacccggggatg
ctctcctaccgtatcacgcatctcacccgcggtaaacaataccacatctgggctgctgct
gtgacgaccgctggccgaggcaacatcagcgcaaaggtcacagtggaacctgctgggaaa
gtcccagctaagatcctgtccttcgggggcacggtgaccacaccctggatgaaggaggtg
cgtctgccctgcagttcagtcggagaaccggcccccaccatcaaatggaccaaagacagc
gaggactctgccatgcccgtgacagcagacagtcagcggctgattttatccaacggcacg
ctggtgctgcgctcggtcaaagcggaggattctgggtactacacctgtacggctacgaac
acgcttggcttcgacaccatcatagtgaacctcgtggtgcaagttcctcctgaccagcct
cgtttgaccgtctccaccacctccacctcttctatcaccctggcctggatccctggagac
aacggaggaagctccatcagaggatttgtgctgcagtattcagtggacaacaccgaggag
tggagggatgtgttcatcagctccagcgagcgctccttcaggctggacaatctccggtgc
ggaacgtggtacaaggtcaagctggccgccaagaacagcgtgggttctgggcggatcagc
gagatcatcgaggccaagacgcatggcagagagccggtgttcaacaaggaccagccgctg
ctcacccacatcaactccacccacgcggggctcaacctgcagggctggaccagcggcggc
tgccccatcaccgacctcatgctggacttcaggcccaagggcacgtgggcctggcagagc
ctcaaggccaactccaccaaccagctcttcctcagcgagctgcgcgaggccacgtggtac
gagctcaaaatgaaggcctgcaacagcgccggctgcggcaaccagagttcccagtttgca
accacagactacgacggcagtacgatccctccaatcaaatctgcccgcggagagggggat
gacgtgaagaagctgttctccatcggctcgcctgtcatcctggtcaccctgggtgtcgcc
ctgctctttattatccgcaagaagcgcaaggagaagaggcttaagcggctcagagatgct
aagagcctggcggagatgcttatcagcaagaacaatcgcagcatagacacaccggtgaag
ggccctcctcaaggaccaaggctgcacattgacatcccacgcgtccagctgcttattgag
gacaaagaaggcatcaaacagataggagaggacaaggccgccgtcccagtgacggacacg
gagttcagccagtcggtgaatccccagaacttctgcacaggcgtgtcgctgcatcaccag
gctctcatccagaactcaggacctctgatcgacatgtcggacatccgtcccggcaccaac
cccgtctccnnaaagtcggcccacagctccagaaacagatactccagccagtggacgctg
agccggccgagtcagagccagtccacggcctcggcgcgaactctgacctctgactggcgg
acgatgggctctcatggcatcacggccacagagagcgacagctacagcgccagcctgtcc
caggacacagataagggtcggaacagcatggtgtcgaccgagagtgcctcttccacctac
gaggagctggctcgcgcctacgagcacgccaagctggaggagcacctgcagcacgccaag
ttcaccatcacagaatgcttcatctccgacagctcgtccgaccagatgaccaccggtacc
aacgacccggcagacagcatgacctccctgagcacgccgtctgaaccgggcatctgccgc
ttcaccgcctccccacccaaaccgcaggactacgaccgcggcaaaaatgtggctgtgccc
attccccaccgcgccaacaaaagtgaattctgcaaccttcccctctacatgaagacagac
ccgttcttccgcaagcagggggagctgcacgacccgtgcccagccgtgccgccgcgggaa
gcctcgatccgcagcctgacgcagcgggcgtaccacacccagggccgtcacaagactctg
gacccctgcaagcagcaggccctgacgctgggccactctgggctgagcagtctgggcgcg
agctcgggcaccgccaccctgccccagaggactctcaccatgcccagctccaacgccgcc
gccacggcctccacctccagcacgggcagcaaccccgccagcagtaacaaagtggggggc
tccagagactcgctgctcgagagcagctcctctgcgctggggcggctacagaaacagagc
gtaggggcctactccaagtcgtacacactggtgtag
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