Cololabis saira (Pacific saury): 133459728
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Entry
133459728 CDS
T09849
Symbol
npas2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133459728 (npas2)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133459728 (npas2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
133459728
NCBI-ProteinID:
XP_061595937
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Position
14:16602691..16648389
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AA seq
899 aa
AA seq
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MDNLSDFCGPCPSSHREWDTNSCVDDLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTIDFLQKQKDITAQNEISDVRQDWKPSFLSNEEFTQLMLE
ALDGFLVALTTDGNIIYVSDSVSSLIGHLPSDMVDQNILNFLPEREHGEVYKLLSSHMLM
TDPIATDFLDSEAHIEFCCHLARGNMDPKEPPVYEYVKFVGDFKFHNNVPTSSCNGHELT
LPRSLQSSLEEQVCLIATVRLVTPQFLKDLCNVEDPCDEFTSRHSLEWKFLFLDHRASPI
IGYLPFEVLGTSGYDYYHVDDLEVIAQCHKQLMQCGKGKSCYYRFLTKGQQWIWLQTHYY
ITYHQWNSKPEFIVCTHTVVSYAEVRAERRRAMGLQDLSPPEVAPSSVKAQELYLDICST
LDAPLDRNSGAHSVSSHSSRKSSHTVLSDSASANSYTEACTPSWQSASVGQEKSSARVQP
SSSKNLAQRQNSFDFPQVNLPPSPTCSNHSAMQQQTQQQQQPQQQQLQPQQQQQQLQQQQ
QPQQQQQQQQQYQLQQPQLGVMNQLKEQLEERTRILQADIKTQQQELHDIKEKLQLANLQ
MLLQQPVQNNFSQAQQQPQQQPQQQGPGRPAQQNQSGVIRQHSGHQKPAACGAHTPSPHS
VLTDNSSPSTQVQQRVPRSGQAHSVSLPVQTSTSLTMPFYSNPMMFSQTNARSQQDANQR
HTDNQYTQDGQLRMLLNQPVQTLVPTTSVTSQPSQCISQTLYSLEQQILGPSFSMQQVNC
NAVLVPSPVFTSPIMIPHNTFITHQSQSPYPSQPQASQHSLQLQQPQQFFQMAQGLVHGG
STPTFLHTTNVSQQSTVGYIQQQPQAQQLPVAQQLQQRQYQHSQNQTGGVSEFRNMLTR
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctttctgacttctgcggcccgtgtccgtcctcccacagggaatgggatacc
aacagctgcgtggacgacttaatggatgaagatgagaaggacagggcaaaaagggcatcc
cgaaacaagtcggaaaagaaaagaagagaccagttcaatgtgctcatcaaggagctttgc
accatgctgcagggtcaagggcatccgcgcaagatggataagtccaccatattgcagagg
actattgacttcttgcagaaacagaaagacatcactgcgcagaatgagattagtgatgtg
cggcaggactggaagccctcattccttagcaacgaggagttcacccagctaatgttggag
gccctggacggtttcctggttgcattaaccacagatggaaacatcatatacgtatctgac
agtgtgtcttcgcttattggccatttaccgtcagatatggtggaccaaaatatcttgaat
ttcctcccggagcgggaacacggagaggtgtataagctgctatcatcccacatgctgatg
actgaccccattgccaccgacttccttgacagcgaggcacatattgaattttgctgtcat
ctagccagaggaaacatggacccaaaggagccacccgtgtacgagtatgtcaagtttgtc
ggagatttcaaatttcataacaatgtgcctacatcttcttgtaacggtcatgaactgacg
ttgccaaggagtctgcagtcatcgctggaggagcaggtctgcctcattgccaccgtacga
ttagtcactcctcagtttctaaaggacttgtgtaacgtggaagatccctgcgatgagttc
acctccagacacagccttgaatggaagttcctgtttttagaccacagagcttcacccatc
ataggttatttacccttcgaggttcttgggacttctggctatgattactatcatgtggat
gacttggaggtcatagcccagtgtcacaagcaactaatgcagtgtgggaagggtaaatcc
tgctattatcgcttcctgaccaaaggacagcagtggatttggctgcagactcactactac
atcacttaccaccagtggaactccaaacctgagttcatcgtctgcactcacacggttgtc
agttatgctgaggtgcgagctgagaggaggcgagctatgggacttcaagacctgtctcca
ccagaggtggcgccttcctccgtgaaggctcaggagctgtacttggatatctgctccact
ctggacgctccgctggacagaaacagcggtgcacactcggtgtcctcccacagctcccgg
aagtcctcccacacagtgctgtcggactctgcatcagccaactcgtacacggaggcctgc
acaccatcatggcagtccgcttccgttggacaggagaagtcctccgccagagtccagccc
agtagctcaaagaatttggcacaaagacaaaattcctttgactttccccaagtgaacctc
cctccttctcccacctgcagcaaccactcagcaatgcagcagcaaacccagcagcagcag
cagccgcagcagcagcagctgcagccgcagcagcagcagcagcagctgcagcagcagcag
cagccgcagcagcagcagcaacagcagcagcagtatcagctacagcagcctcagctcggt
gtgatgaaccagctgaaggaacagctggaggagaggacgcgcattctgcaggccgacatc
aaaacgcagcagcaggagctgcacgacatcaaggagaagctccagcttgctaatctacag
atgttgttacagcagcctgtccaaaacaacttcagtcaggcccagcagcagcctcagcag
cagcctcagcagcagggcccgggaaggccggcccagcagaaccagtcaggggtcatcagg
caacactcgggccaccagaaaccagcagcctgcggggctcacactccatccccccactct
gtcctgacagacaacagttcaccatcgacgcaggtccaacagagggtcccccgcagtggg
caggcacattcggtgagtttgcccgtgcagacaagcacaagtctgacgatgcccttctac
agcaaccccatgatgttctctcagaccaacgcgaggtctcagcaggatgcaaaccaaaga
cacacggacaaccagtacacccaagacggacaactacggatgctcctcaatcagccagta
cagacactggttcccactaccagcgtcacctcgcagccttcccagtgcatctcccaaact
ctatacagcttggagcagcaaatcctcgggccgtccttctccatgcagcaggtcaactgc
aacgccgtgctcgtgccctctccggtattcacatcccctataatgatcccacacaacacc
ttcatcacacaccagtcccagtcaccctacccatctcagcctcaggcatcccagcactcc
ctgcagctccagcagccccaacagttctttcagatggcgcaaggactggtacacggtgga
tctactccgacgttcttacacaccaccaacgtgtcgcagcagagcacggtgggatacatc
cagcagcagccgcaagcgcagcagctgccggtggcgcagcagctccagcagaggcagtac
caacattcccaaaaccagactggtggcgtctcggagttcagaaacatgttgactcgctga
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