Cololabis saira (Pacific saury): 133459729
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Entry
133459729 CDS
T09849
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133459729 (tbc1d8b)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133459729 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
133459729 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
133459729
NCBI-ProteinID:
XP_061595940
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All DBs
Position
14:16662670..16679149
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AA seq
1132 aa
AA seq
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MWLKPEEILLKNAFKLWVTEKDNEYFVLQRRRGCGEGGGGLAGLLVGTLDTVLDSTSKVA
PYRILHHTPDSQVYWSIACGVTKEEIVQHWDWLQQNIMRTLSVFDSSEDITSFVQGKIRG
LIAEEGKTSLVLEDDPEKFREAFLRFEKWFELSPEEKLVTYYSCSYWRGKVPCQGWLYLS
TNFLCFYSYLLGSEVKLVISWDEIWRLEKTSNVILTESIHVLANGEDHYFSMLLHLSETF
LIMEQLADYSIKRLFDKEAFEKEPALSDPLQITKRGLEAHGKSEQFRTFFRLPQEENLLQ
MHESFLWVPFSHFNTLGKICLSENYLCFASQDGSQCHVIIPMREVINVEKPDAGSRALTV
CVRGKRALRFSEVRDYQQLANAIRSRCGISASPQHSVSPEAIRGECQSLINHFEDNPEDV
TLMVGQKDSSKAVSTEALMTVFHPQDVENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
RKTRDLIVRGVPEALRGELWMLFSGAVNDMATHPGYYTELVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYASRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIRENLPQLVEHMTDLSFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKSILQLGLAVLDYNMEALISCHDDAEAVTILNKFFDSVTNKD
SPLPPTVQQASVGSNDKASHVSVDISELIREAYEKYGHIRSEEVESSRKRNKLYVIQTLE
DTTKQNVIRVVSQEVQFNVSQLDELYNLFKRQHFLSCYWTMKSPALLHHDPSLAYLEQYQ
LGFQQFGGLFSLLEPWAFCSSKSTLSLWVFRLIDENQDGLINFKEFCSALDTLYSGSFTN
KLKLLFKLHLPPAFTGSPLHSKEERIQHFIPLAEDSSHLSRLTAFDLPEDGVIRKSPERG
RGKVDLQAYLKQWQNEILKKEETIKDLPRINQSQFIHFSKTLYNIFHGDPEEESLYRAVA
HVTSLLLRMEEVGRRLQGPSSPPATQNPAKAAAEPSAEDASVSPDSSDTSSSPNSQDAAP
DRSETEWSFSFEQLLASLLNEPVIVSFFERPVDIQTKLGQARAAQLKSKANK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaacctgaagaaatcctgctgaaaaacgcgtttaaactgtgggtgaccgaa
aaggataatgagtatttcgtgctgcagaggcggcgcgggtgcggagaaggtggcggcggg
ctcgcaggcctcctcgtgggaactctggatactgttttggactccacatccaaagttgcc
ccctaccggattctgcaccacacaccagactcacaagtgtactggtcaatagcatgtggt
gttaccaaagaggagattgttcagcactgggactggctgcagcagaacatcatgaggacc
ctttccgtttttgactccagtgaagacatcaccagcttcgtacagggcaagatcagaggc
cttattgctgaggaggggaagacgtctctggtcctggaggatgatccagagaaattccga
gaagcctttctgcggtttgagaagtggtttgagctgtccccggaggaaaagctggtcaca
tactactcgtgcagctactggagaggcaaagtgccgtgccagggctggctctacctcagc
actaacttcctgtgcttctattcgtaccttctgggatctgaggtaaaactggtcatctcc
tgggatgagatctggagactggagaagacctctaatgtgattctgactgagagcatccat
gtgttggctaatggagaggatcattatttctccatgctgctgcacctcagtgaaaccttc
ctcatcatggaacagctggccgactactccatcaagcggctttttgataaggaggcattt
gagaaagagccagcgttgtcggaccccctgcaaattaccaagagaggcctagaggctcat
gggaagagtgagcaattccggacgtttttcaggcttccgcaagaggaaaacttactacag
atgcacgagagcttcttgtgggtgccgttcagccatttcaacactcttggtaaaatctgc
ctctctgagaactacctgtgtttcgccagtcaggatggaagccagtgtcatgtcatcatt
ccaatgcgagaggtaatcaatgttgagaaaccggatgctggcagcagggctttaaccgtt
tgcgtgcgtggcaagagagcgctgcgtttctccgaggtgcgggactaccagcagctggcg
aacgccatccgcagcaggtgtgggatcagtgccagcccacagcattcggtctcgccagag
gccatacggggcgaatgtcagtcactcataaatcacttcgaggacaacccggaggacgtg
actctcatggtgggacagaaagacagcagcaaggctgtgagcacggaggctctcatgacc
gttttccacccccaggatgtggaaaaccttgatcccaaaatgctcaaggagaagatgaag
gagcagtcttggaacatccatttctctgagtatggacgtgggacaagtatgttcttcacc
agaaagactcgagacttgattgttcgtggagttcccgaggctttgaggggagagctgtgg
atgctgttttcaggagctgtaaatgacatggccacccaccccggctactacacggagctg
gtggagcagtctttgggcacaagcactctggctacagatgagattgagagagacctgcac
cgctctctgccggagcatcccgccttccagagcgacacggggatctccgctctgcgcaga
gtcctcactgcctacgcctccaggaaccccaaaattggatactgccaggccatgaacatt
ctcacgtcagttctcctcttatacgcaaaagaagaggaagctttctggctgttggtcgcc
gtctgtgagaggatgctgccagattactttaaccgcagaattattggtgctctggtcgac
caggctgtcttcgaggacctgatcagagagaacctcccccagctggtggagcacatgaca
gacctgagtttcttctcgtccgtgtcgttgtcttggtttctcactcttttcatcagcgtc
ttgcccatcgagagcgctgtcaacgtggtggactgtttcttctacgacggcatcaaatct
atcctgcagctcggccttgctgtgctcgactacaacatggaggctctgatcagctgccat
gatgacgctgaagcggtcaccatcctcaacaaattctttgatagcgtgacaaacaaagac
agcccgttgcctccaacagtccagcaagcttcagtgggcagtaacgacaaagcatctcac
gtcagtgtcgatatcagcgagctgatccgagaagcttatgagaagtatggacatatccgt
tcagaggaagtggagagttcccggaagagaaacaaactgtatgtgatccagacactggag
gatacaaccaagcaaaatgttatccgcgtggtgtcccaagaagtgcagtttaacgtctca
cagcttgatgagctttataatttgttcaagagacagcatttcctcagctgctactggacg
atgaagagtccagctctgctccaccatgaccccagtctggcgtatttggagcagtaccag
ttgggtttccaacagttcggcgggctgttctccctgctggagccctgggccttctgctcc
tccaagagcaccctctctctctgggtgttccggctcatcgacgagaaccaggacggtctg
atcaacttcaaagagttctgctcggctcttgatactttatacagcggatctttcacaaat
aagctgaagttgctcttcaagctgcacctgccaccagctttcacaggtagtcctttgcac
tcaaaggaagaaagaatccagcactttattcctctggctgaagactcttctcacttgagt
agactgactgcctttgatcttccagaagacggtgtaatcagaaaaagcccagagagaggc
agggggaaggttgatctgcaggcttatctgaaacaatggcaaaatgaaattcttaaaaag
gaggaaaccatcaaggacctacccagaattaatcagtctcagttcatccatttctccaag
accctctacaatattttccacggggatcccgaggaggagtccctgtaccgggctgttgcc
catgtgaccagcctcctcctgaggatggaggaggtgggacgcaggctgcaggggccgagc
agcccgcccgcgacgcaaaacccagccaaggccgctgctgagccttcagccgaagacgcc
tccgtctctccggacagctcagacacatccagctcccccaacagccaggatgcagcaccc
gaccgctcagagacggagtggtccttctcgttcgagcagctcctagcgtctctgctcaac
gagccagtgatagtcagcttcttcgaaaggccagtcgatattcagaccaaactgggacag
gctagagccgcccagctgaagagtaaggcgaataagtga
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