Cololabis saira (Pacific saury): 133459794
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Entry
133459794 CDS
T09849
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133459794 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133459794 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133459794 (ncor1)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133459794 (ncor1)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
133459794 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
133459794
NCBI-ProteinID:
XP_061596067
LinkDB
All DBs
Position
14:complement(20863649..20922893)
Genome browser
AA seq
2406 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPPHSVQYTFTSARHQQDFTTPDYRSHMQDPQGRRRLSLL
SEFHPGTERPPERRHGYEQQFHSITAQPEHEALEVKRPRMETIGEGHITRTPPTAGSIVL
QMPHSVQDSLRATVEVKKESQFSVKLESQSPGGLTLHMNEDQDNSPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQIMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MRVYKARQFMNVWTEHEKEIFKEKFIQHPKNFSLIASYLERKSVADCVLYYYLTKKNQNY
KTLVRRNYGRRRKNQQITRPSQEDKSDEKNEEEKSEKSEKKEDEEKKDEEEKDEKEESRD
IGKDKEKCDGVEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVANEEAPPSAP
EPPMPDPPQLLKSDPAQKGGKEPGKPLTPVSSMESNKVGPGETGETSRWTEEEMEVAKKG
LVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARGDRSQGEGH
AMASPDDDEDNVDDSEGGDNSSDTESAPSPSQADSKSGESKRAENTTGDATCSDQDKGQA
SNGKAAEPSYGEFRVKEEKSPESETGSQEEKSRVASFPGPVHPKTEPQDVDMKTGEVQVK
LEPEIKEKGEKGDHGERHRDIHSDNDSSATCSADEDVEAEPERLRLYPMDKPSLLCPPGT
VLVASPKQAQLNMQQMQKRAAAIPPMVSGPYGPGGLPISGLTMFQHQIKAVHDSAHQEEK
QRQDLGDMDRRPPFNTRSPTVLDRDGKALPYMPYDMMLALDPEGHSGQSGSPYRLSPREL
SKASPQPDPNAPNVSCYSVPPVLHPSPSQLVQSMNDGVRVTFSRPSRPPNIPSPPPLIPT
TKPTDKPSFIHGGSISQGTPGTYLPSHAVYGPEGTKSAVGSISLGLPRQLDPNKPGATIS
SIQDGRGNPSKVGEGLALRGSITQGTPALSQSNIAAADLLKGTITKLATEDLSSPDKARG
EQLAKGHVIYEGKSGHILSYDAIKNPRENTRSPRTGHELKRTHDMMEGPMGRGHPGRDGA
PLEGLISRALPREGHHGDSKERPLMTGSIMQGTPRTNAESYEDAMKYGKQIKRESPPIRS
FDGAIGKGKPYEGVNTIKEMGRSIHEIPRQDQSGQDMCKTPDLADRRVMEGSMPQIHPLS
QSTIKHNVKSLITSPSKHPHSMPQLEAMERAKYEESKPVRHTSVVNSTTSVLRSTHQEAS
KAQHSPGMYEDANARRTPVNYSTNPVSRGSPMLGRAPDGGISSAKSTAHDRKSTLTPTQR
DCVPAKSPVSGGDPVTSHSPFDPHHRPVVPGEVYRAHLPPHLDPALAFHRVLDPAFMFPR
QQSPTGYHNTYQLYTMENTRQTILNDYITSQQMPGMSRGLSPREQPVAIPYPASARGIID
LAQMPPTILLPHPGGTGAPSLERTVYLSGAQPPFPPRAFNPTSISPGHPSHLAANAERER
EREQQEKEREKEREQREREREREMRERERERERERERTNEYIRGGGPEQPVRPGSRGYLH
SPSPSSLRTQEVVVQQRPSIFQGKSVITSLMHNPQATTSAPQSSSRYSTAADALAALVDA
AVSAPQMDVAKVKESKHERDEDMSSSSAVRRAPNLSEQQQPEAESRSLHSPYSTMSLPGG
KPHPSYPDSSGMGAKEKAPQTKSRIEEELRTHGKTTITAASFIDVIITRQIASDKDSRER
ASQSSESSGRLSSGRYDNTAAGAIEVISPPSSPVQPQQDKPEDGQQQAPVGMRAYDMSRY
RQSGEPLQPPSSQADSYSQVPKTHRVMTLADHISHIITQDFARNQDPPVSSSASSSTFQG
SAPSVSSSGRVKAPSRYSPENQVQPPHHQRSSSRISPENASDKPRARPGKSPERGGRSME
NYEPISPPQGYQGMDKQEAAGAPLQRREADNSEIRTDSRSPGNIGYLPAFFTKLESTSPM
VKSKKQEIFRKLNSNSGVGDSDVGSAQPGTEIFNLPAVTSSGSINPRNQSFNDAASNLGL
EDIIRKALMGNLEERQEEHQGGGGGSVGINNASSQGGDARQEASQSPSMGKQKQSKANSR
KSKSPNLSQAYAGGERPSSVSSVHSEGDYHRPTQPQWSWDDRPSSTGPMQFPFNPLTIRM
MSNTPPTSIASPSLQSQQQQQQQQQQQQQQQQQQQQQPPAGAPVTQQRPWPSLLSEQYET
LSDSDD
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccccagccaggggagcttcagcagcgagcagagccga
tatccacctcactctgtccagtacaccttcaccagtgcacgccatcaacaggatttcacc
accccagactatcgttctcacatgcaggacccacagggtcggagaaggctgtctttacta
tctgaattccaccctgggactgaaaggcctccagaaagacgccatggttacgaacagcag
tttcactccatcacagcccagcctgagcatgaagccttggaggttaaacgccctcgcatg
gagactattggcgagggccacatcacccgcacccctcccactgcagggagtattgtgctc
caaatgccccatagtgtacaagacagtttaagagcaactgtggaagtcaaaaaggagtct
cagttcagtgtcaaattggaatcacaatctccaggaggactgactctacacatgaatgaa
gaccaagacaactctccatccaaactatccaaggaagagctgatccagagtatggaccgt
gtggatagagagattgccaaagtcgagcagcagatttttaagctgaaaaaaaagcagcaa
caactggaggaagaagcagcaaagccagtggagccagagaaaccagtgacccctccccca
gtggagcacaagcaccgcagcatcgtccagatcatctacgatgaaaacagaaaaaaagca
gaggaggcccataaaatactggaaggccttggtcccaaagttgaactgccgctgtacaac
cagccatcagatacaaaagtgtaccatgacaacatcaagacaaatcaaatcatgaggaag
aagctcattttgtttttcaagaggaggaaccatgcacgtaaacaaagggaacagaagatc
tgtcagcgatatgaccagctcatggaggcgtgggagaagaaggtggagcgtatggagaac
aaccccagacgcaaagccaaggatagcagaacgcgggaatactatgaaaggcaattccct
gagatccgcaaacagagagagcagcaggagcgcttccagagagttggacaaaggggaacg
ggtctttctgcaacaattgcaagaagtgagcacgagatctccgaaattattgatggcctc
tctgaacaggagaacaacgagaaacaaatgcgacagctatcagtcatcccacccatgatg
tatgactccgagcagaggcgagtgaagtttatcaacatgaacggcctaatggatgacccg
atgagggtgtacaaagcccggcagttcatgaatgtttggaccgagcatgaaaaggagatc
tttaaggagaagtttatacaacaccccaagaatttcagcctgattgcttcctatctagag
aggaagagtgttgctgactgtgttttgtactactacttgaccaaaaagaaccagaactac
aagacactagtgaggcgaaattatggaagacggagaaagaaccagcaaattacacgtcct
tcacaagaagataagtcggacgaaaagaacgaagaggaaaaatctgagaagtcagagaaa
aaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggagtctagggac
attggcaaggacaaagaaaagtgtgacggtgtggaggacgaggacggtaaagagcaaaac
acgccgcgcggcagaaagaccgccaacagccagggccgccgtaaaggaaggatcaccaca
cgctccatggccaatgaggctgcatctgttgcaaatgaggaagcgcctccctctgcccct
gaacctcccatgccagatcctccgcagctccttaaatctgacccagcacagaagggcggg
aaggagcccggaaagccgctgactccagtctcttcaatggaaagtaataaagttggtcct
ggtgaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaagga
cttgttgaacatggtcgaaactggacagccattgccaaaatggtgggtaccaaaagtgag
gcacagtgcaagaacttctatttcaactacaagagacgtcataacttggacaacctgctc
cagcagcataagcaggatactcggagggctcgtggtgataggtcccaaggggaaggccac
gccatggcatcacctgatgatgacgaagacaatgtagatgacagtgaaggtggtgacaac
agctctgacacggagagcgccccttctccctctcaggccgactcaaaatctggagagtct
aagagagcagaaaacaccacaggagatgcaacatgctcggaccaggataaaggtcaggcc
agcaatggaaaggccgcagagccctcatacggagaatttcgtgttaaggaagagaaaagc
cctgagagcgagactggctctcaagaggaaaaaagcagagtggcatcttttcctggcccg
gttcatccaaaaactgaaccccaagatgtggacatgaagactggagaggttcaggtgaag
ttggagcctgagatcaaggagaaaggagaaaagggagaccatggcgaaaggcatagggac
atccactcagataatgattcaagtgcgacttgcagtgctgacgaggatgtggaagcagag
cccgaacgactccggctataccccatggacaaaccgtcgctgctctgtcctccaggcaca
gtgctcgtggcctcacccaagcaagctcagctcaacatgcagcagatgcagaagcgtgca
gctgccatccctcccatggtgtctggtccttatggtcctgggggattgcccatcagtggt
ttaaccatgtttcaacaccagattaaagcagtgcatgactcggcacaccaggaggagaag
cagaggcaggatctgggagacatggaccgcagaccccccttcaatactcgcagccccact
gtactggacagagatggtaaggccttaccctacatgccttatgacatgatgctggctctg
gacccggagggtcactctggtcagtcaggctctccctacagactctcccccagagagctg
agcaaggcctcacctcagcctgaccccaacgcccccaacgtctcctgctacagtgtgcct
ccagtcctccatccttccccgagccagctagtccagagcatgaacgacggagtccgtgtg
acgttcagcaggcccagtcgacctcccaacattccttctcctcctccactcattccaacc
accaagcccacagacaagccttccttcatccatggaggctccatctcccagggaactcct
ggcacatatctcccgtcccatgccgtctatgggccagaggggacgaagagcgctgtgggc
tccatctctctgggtttgcctcggcagctagatcctaacaaacctggggctacgatctca
tccatccaggatggcagaggcaacccttcaaaggttggtgaggggttggctctgagagga
tcaattactcagggtactccagccctgtctcagtctaatattgctgctgcagacctcctg
aagggtacaatcacaaaactggccacagaggacctgagcagcccagataaggccaggggg
gagcaacttgctaaaggtcatgtcatatacgaaggcaaaagcggtcacatcctctcctac
gatgccataaagaacccccgggaaaatacccgaagcccccgaacaggccacgagctgaaa
cgaacccatgacatgatggagggacccatggggagaggacatcctggcagggatggagct
ccattggagggattaattagtagagccttgcccagagaaggccaccatggagactctaaa
gaaagaccattgatgactggatccattatgcagggaaccccgagaaccaatgctgaatcg
tacgaggatgccatgaaatatgggaagcagataaagagagaaagcccacctatccgctcc
tttgatggggctattggcaaaggcaagccctatgaaggagtcaatactatcaaagagatg
ggacgttcaattcatgagatcccccgacaggaccagtctggccaagacatgtgcaagact
cccgacctggcggacagaagagtaatggagggctccatgcctcagattcaccctctgagc
cagtctactatcaaacacaacgtcaagtccctgatcaccagtcccagcaagcatccgcac
agcatgccccaactggaggcaatggagcgagccaaatacgaggagagcaagccagtgcgc
cacacatccgtggtcaactccaccacctctgtcctgcgctccacacaccaggaggccagc
aaagcccagcacagccccggcatgtatgaggacgccaacgctcgcaggacccccgttaac
tacagcactaatccggtttccagaggatcacccatgctcgggcgtgcgccagatggtgga
ataagctctgcaaaatctactgcacatgacagaaagagtaccctgaccccaacacagagg
gactgtgtcccagccaagtcccccgtgtctggcggtgaccctgtaacctcacacagtccc
ttcgacccccaccaccggcctgtcgttccaggagaagtgtaccgagcccacttgcctcca
catctcgatcctgccctggccttccacagagtgctggatcctgcgttcatgttccccagg
cagcagtccccaacaggctaccataacacctaccagctatacaccatggagaatacgcgg
cagactatcctcaacgattatatcacgtcccagcagatgcctggcatgagccgagggctg
tcgccacgggaacagcctgttgctatcccttatccagccagcgctcgagggattattgat
ctagcccagatgcctccaactatcctgttgcctcaccctgggggaacaggtgctccctct
ttggaacgcaccgtctacctctctggagctcagccccctttccctcctagggctttcaac
ccaacctccatatctccaggccacccgagccatcttgccgccaatgcagagagagaacgg
gagagagagcagcaggagaaggagagggaaaaggaacgggagcagcgggagagagaacgg
gagcgggaaatgagagaacgggaacgtgaacgggaacgtgaacgggagcgaaccaatgag
tacattcgtggaggtgggccagagcagccagttcggcccgggagtcgaggttacctgcac
tccccttctccttcctcacttaggacacaagaggtggtggttcagcagcggccgagcatc
tttcagggaaagagtgtcatcacgtctctcatgcataatccacaagccacgacatcagca
ccccaaagtagttcccgctacagtactgcagctgacgctctagcagctttggtcgacgcc
gctgtctctgcaccacagatggacgtcgccaaggtgaaggagagtaaacacgagcgggat
gaagatatgtcttcatcaagtgcagtgagacgcgcacccaacctctctgaacagcaacaa
ccagaagccgaaagccgatctttgcactcaccgtatagtaccatgtccctaccgggaggc
aagccccatccctcttaccccgatagttcaggtatgggggctaaagagaaggctcctcag
acaaagtcccgaatcgaagaggagctccggactcatggaaagacaactataacagctgca
agcttcatcgacgtcatcatcacgcgtcagatcgcctcagacaaagactcgcgtgaacga
gcctcccagagctccgagtcctcaggccgcttgtcatctggtcgatatgacaacacggct
gcaggagccattgaagtgataagccctcctagttccccagttcaaccccaacaggacaaa
ccggaagacgggcaacaacaagcaccagttggcatgcgggcgtatgatatgagtcgttac
cggcagtcaggggaaccacttcagcctccttcctcccaggcagacagctactcgcaggtc
cccaaaactcaccgagtcatgaccttggcggaccacatttctcatataatcacccaagac
tttgccaggaatcaggaccctccggtctcctcttcagcatcatcatccacattccagggc
tcagcgccatcagtgtcatcgtcaggtcgggtcaaggcacccagccgctacagtcccgaa
aaccaggtccagcctcctcaccaccagagatcctccagcaggatatctccagagaacgcc
tctgacaagcccagagctaggcccggtaagtctccagagcgaggaggcagatcgatggag
aactacgaaccaatttctcctccacagggataccagggcatggacaaacaagaggctgct
ggtgctccactgcagagacgagaggctgacaactctgagatcaggaccgactctcggtcc
ccaggaaatataggctacctgcctgcctttttcaccaagttggagagcacctcaccgatg
gttaaatccaagaagcaggaaatctttcgtaagttgaactccaactctggtgttggtgat
tctgacgttggaagcgcacagccgggaacagaaatcttcaacttgcctgctgttaccagt
tcaggcagcatcaacccaaggaatcagtcctttaatgacgcagccagtaatctgggttta
gaggacatcatccgcaaggccttgatgggcaacttggaggagagacaggaggagcaccag
ggagggggaggagggtctgttggcatcaacaacgcatccagccaaggtggtgacgcccgg
caggaggccagtcagtctcccagtatgggaaagcagaagcaaagcaaagcaaacagccgg
aaatccaagtcacctaacctgagtcaggcctacgccggaggggagcgtccctcgtcagtt
tcctccgtccactccgagggcgattatcacagaccaacacaaccccagtggagctgggac
gaccggccttcctccacaggtcccatgcagtttcctttcaacccgctgaccatacgcatg
atgagcaacacgccacccacctcaatagcctcgccttctctccagagccagcagcagcag
cagcaacaacagcaacaacagcagcaacaacagcagcagcagcagcaacagcccccagca
ggagcacctgtgacccagcagcgaccatggccgtctctgctgtcagaacaatatgagacc
ctatctgacagtgacgactga
DBGET
integrated database retrieval system
