Cololabis saira (Pacific saury): 133459825
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Entry
133459825 CDS
T09849
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133459825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133459825
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133459825
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133459825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
133459825
NCBI-ProteinID:
XP_061596115
LinkDB
All DBs
Position
14:complement(21294652..21398397)
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AA seq
817 aa
AA seq
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MRAGLWPWLLMAALQLVLGQPGLEAERPALRAVIKVSLLKHEPTGKPIVLEGVFVGGSAG
KAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKGAQAVIF
DVSDDANAAAEIYTRTQLKETDSLPRPVVLVEAYNAEALMSLVNKNEEAKVVIEIKMEPK
WLHYDVSILLTIVLVILTIILIFVFRYKCKSNRTWDSVHQQTMRAISRLETKTYSSQSCA
GSQRHHGGWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCPL
CMHNIMGTERQPQRSRPQRTPEQSQGFLHPQSYSSPHNHPFPQHAIPFSMRPHYPPGPSG
PYPNLGHYSGASPMDTQNLHYFSSRQPGAGCGYHHHQASEGPGRPHRMGGNCRTSTHHYA
PRRSCHNYRSSCPAQRSASSSRLQHALSAVPPSRGAAVHGRQDEGSCSGGSYHTERSGYL
ADGPASDSSSGPCHGSSSDSVLNCTDVSLQGLYGSWSTSRSSLSSDYNPFGYFGQGPGPG
RPPHKSSPEAGAQARPRSLDSVVNKASGPEEQPQTVLSHFHYHRHRHHHYEDGEHGQGLS
RGSDEDQGAGGAAAALSTDSPVCPPKHPPCHCPKPDPTDRPSPGTECQDRDPPSPSGPPV
LVSPVSVQLQSHCCHQGHGHPPAPLGQVGGCLLDGPSVRFHQNLQDLQDDRSIHIYYRQG
PGCCCPPPELHPALLPLPLIVDSGGMDDWPCCSGAHVVWQKRVQQAHSEPQLVGPGTSMD
RLPCRLHQGPAGDRSTDVCLYCQSFHSNQGSEEESGV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgggctctggccgtggctgctcatggcggccctgcagctggtgctgggccag
ccgggcctggaggccgagcggccggccctgcgggccgtcatcaaggtcagcctgctcaag
cacgagcccacggggaagcccatcgtcctggagggggtgttcgtcggggggagtgccggc
aaggcggaggggaagctgatgcagtatcaccctctttctctgtgcaacacaagtgaggat
gagcgccaggagagtgacttcatcaccatcgtcaaactggagcacagggtcccccgctgt
ctgccgctgctcgacaaggctcgcatggcgctggataaaggagctcaagccgttatcttt
gatgtcagcgatgacgccaacgctgccgccgagatatacacacgaacccagctgaaagaa
acagactcccttccccgtccagtggtgctggtggaggcttacaacgccgaggccctgatg
agtttggtcaacaagaatgaggaggccaaggttgtcattgagataaagatggagcctaag
tggctacactacgatgtgagcatcctcctcaccatcgtcctggttatcctcaccatcatc
ctcatctttgtgttccgctacaagtgcaagtctaacaggacctgggattctgtacatcag
cagaccatgcgggccatcagtcgactggagaccaagacctacagctcccagagctgcgcg
ggctcacagcgccaccatgggggctggggctcggccagcagctccaactccagccccgtc
tgtgctatctgcttggaggagttccaggacgggcagcatctgaggatcatctcctgcgct
catgagttccataaggactgcgtggacccctggctgctgcagcaccgcacctgtcctctc
tgcatgcacaacatcatggggacggagcgacagcctcagaggagcagaccccagcggact
cctgagcagagccagggcttcctgcatccccagtcgtacagtagcccacataaccacccc
ttcccccagcacgctatcccattctccatgagaccccactacccccccgggccctcggga
ccctaccccaacctgggccactacagcggtgcttcccccatggacactcagaacctacac
tacttcagcagtaggcagccgggtgcaggctgcgggtaccaccaccaccaggcgtcagag
ggccctgggaggccacacaggatgggaggtaactgcaggacctccacccaccactacgcc
ccccgccggtcctgccacaactaccgctcctcctgtcccgcccagcgcagcgcgtccagc
tccagactgcaacacgccctctcggctgtgccgccgagccgaggcgcggcggtccacggc
cggcaggacgaggggagctgctcgggcggcagctaccacacggagcgcagtggatacttg
gcggacgggcccgcgagcgactccagctcagggccctgtcacggctcctccagtgactcg
gttctcaactgcaccgacgtgtccctgcagggactttacggcagttggtccacctcccgc
agctctttgagtagtgactataatccgtttgggtatttcgggcagggtcccggtcccggt
cggcctccccacaagagcagtccggaggccggcgcccaggcccggcccaggtctctggat
tctgtggtgaacaaagcgagtgggcccgaggagcagccgcagactgttctcagccacttc
cactaccatcgccacagacaccaccactacgaggacggggagcacggccagggcctgagc
agaggctcggatgaggatcagggggccggcggcgccgcagccgcgctctccacggactcg
cccgtttgccccccaaaacaccccccctgccactgtcccaagccggaccccacagaccgt
cccagtcccgggacggagtgccaggaccgtgacccccccagcccctcgggacctcctgtc
ctggtgtccccagtctctgtccagctccagtcccactgctgccaccagggacacggacac
ccccctgctccgctggggcaggtgggaggctgtctgctcgacggcccctccgttcgcttc
caccagaacctgcaggacctgcaggacgaccgcagcatccacatctactaccgtcagggc
cccggctgctgctgccctcccccggagctgcacccggccctgctccccctgcctctcatc
gtggattctggagggatggacgactggccgtgctgtagcggggcccacgtcgtgtggcag
aaacgggtgcagcaggcccattcggagcctcagcttgtgggacccgggacctcaatggac
agacttccctgcaggctccaccagggccctgccggggaccggagcacagacgtttgttta
tactgccagtcttttcacagcaatcagggatcagaagaggagtctggagtgtga
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