Cololabis saira (Pacific saury): 133459828
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Entry
133459828 CDS
T09849
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
csai
Cololabis saira (Pacific saury)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
133459828
NCBI-ProteinID:
XP_061596128
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All DBs
Position
2:complement(20695380..20717028)
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AA seq
1111 aa
AA seq
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MGQRAALLLTELLLLLLTASRTLLAVSFPEDTVPLDVIDAHFSRRYPVFRGRPSGNESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQLDRDMCAVKGKHR
DECHNFIKVLVPRNDDLVFICGTNSFNPMCRYYRLDNLEFDGEEISGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIRYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDIGGSQRVLEKHWTSFVKARLNCSVPGESFFYFD
VLQSITDIIDINGVPSVVGVFTTQMNSIPGSAACAFSMADIEKVFLGRFKEQKTPDSVWT
PFPEEKLPKPRPGSCAGHGPAASFKSSIEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKT
RVRYRLTALAVDNEAGPHKNYTVVFIGAESGIVLKVLAKTSSEFLNDSLLLEEIDVFNKA
KCLSTREDDKRVLSLHVDKDAHSLYVAFSSCVIRVPLSRCERHSSCHKSCIASRDPYCGW
KTHGACERIQPGVLAGYEQDVEFGNTAHLGDCQAFLGTTSAPDYKSFGDPTSDMEFSSAP
VTVQPSGPIHPPVLIPTQNPSPEPAPKLYGSGFVQQDDPATSHSLDSIPGGQEGMWDNHT
SDTNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSVLRKPRRVHKDAESAPSCSDSIG
SFVKLNGLFDSPVKEYQTNIDAPKLYTNLLSNGKDLNTPNGDTTTMILRDGCQPPELAAL
PTPESTPVLQQKGLQPIKNQWERAHGKASGPHKESNSSAKSPQFLPSSSAPGNSNPHHPS
LALGHSHIPSAVVLPNATHDQPNLDNGDETLPHSSEKKLKNTDSKGSRKEQKRSVDARNT
LNDLLKHLNDSVANPSAILQEGSGPRPRPQLTLEPMDELTEVPPKVPSREASLYSPSSSL
PRHSPTKRVDVPMPSAPTTPTGSLSMGGTLERQRGGYQLHRSASHRHSLSTSPNGVTMGV
SVSRQQSMNRGGYMPPTPPSRLDSHGAVMAPGMHSPHPSSVSRQGSYSGHGSLPRTGLKR
TPSIKPDVPPKPNGFSQQQTPQMRVVNKYSY
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgcgcttctgctcactgagcttctgctgctgttgctgacagcctcg
cgcactctcctcgcagtcagcttcccagaggacaccgtgcccctcgatgtcattgatgcg
cacttttcacggagataccccgtgttcagaggcaggccctctggcaacgagtcccaacat
cgccttgactttcagctgatgaccaagatacaggacacactgttcatcgctggcagagat
caggtgtaccttgtcagtctgagagaatcctacaggaatgagatcattccttaccggaag
ttaacatggcgatcgggccaacttgacagagacatgtgtgctgtaaagggaaaacacaga
gatgagtgccacaacttcatcaaagtgctggtccccaggaatgacgacctggtgtttatc
tgtggtaccaatagctttaaccccatgtgcagatactacaggctggataacctcgagttt
gatggggaagagatcagtggtctggcacggtgcccatttgactccaagcaaaccaacgtt
gccctgtttgctgaagggaagttgtattctgcaactgtagccgacttccaggccagtgat
tctgtcatctaccgtagtatgggtgacggatcagctttaagaaccataagatatgactcc
aaatggctaaaagaacctcatttcctgcatgcagcggagtatgggaattacgtctacttt
ttctaccgagagattgcagtggagcacagcaatctgggaaaggttgtgtattcccgcgtg
gcccgaatctgtaaaaatgacatcggcggctcgcagcgggtgctggagaagcactggact
tcttttgtgaaagcgaggctgaactgctctgtgccgggcgagtcattcttctacttcgat
gtgctgcagtccatcaccgacatcatcgacatcaacggcgttccctcggtggtgggcgtg
ttcaccacgcagatgaacagtatcccagggtctgctgcctgtgccttctccatggcggat
atagagaaagtattcttgggccggttcaaagagcagaagacgcccgactctgtgtggact
ccgtttccggaagagaagctgcctaaacctcgacccgggagctgtgccggtcacggtcca
gctgcgtcctttaagagctccattgagttcccggatgacaccctgcagttcatcaagtcc
cacccactgatggacacagctgtgccgtccatcggggacgagccttggttcaccaagacg
cgagtccgctacaggctaacagcactggctgtggacaatgaagcaggaccgcacaagaac
tacacggtggtgttcatcggggccgagtcggggatcgttctcaaggttttggccaaaacc
tcctctgagttcctgaacgacagcttgctcctggaggaaatagacgtcttcaacaaggcc
aagtgcctgtctacccgtgaggacgacaagcgtgtcctctcgctgcatgtggacaaagac
gcacacagcctttatgtcgccttttcaagctgtgtcatccgtgttcccctgagtcgctgt
gaaaggcattcttcctgccacaagtcctgcatcgcgtcaagggatccgtactgcggctgg
aagactcacggagcttgtgagaggatacaaccgggtgttttggctggatatgagcaagac
gttgaatttggaaacactgcccacctcggcgactgccaggcatttttgggcactacttca
gcgccagattacaaatcatttggcgaccctacctctgacatggagttttcatctgcgccc
gtcactgtccagcccagtgggcccatacaccccccagtactcatacccactcagaacccc
agccctgagcctgctccaaagctctacggctcaggctttgtgcagcaggatgacccagcc
acgtctcattctttagactctatcccaggggggcaagagggtatgtgggataaccataca
agtgataccaaccagatggtccacatgaacatcctcatcacttgcgtctttgctgctttt
ctcatgggtgccctactggctggtctgattgtgttctgctatcgtgactctgtcctgcgc
aaacccagacgtgtccacaaagacgcagagtccgcaccatcctgctctgactccattggg
agttttgtcaagctcaacggtctttttgacagccctgtcaaggaataccagacaaacatt
gatgctcctaagctgtacaccaatctgctcagcaatggcaaagacttgaatacacccaat
ggtgacacaacaaccatgatcctacgggatgggtgtcagcccccagagctggctgcccta
cccacacctgagtctacccctgtgcttcagcagaagggcctacagcccatcaagaaccag
tgggagagggctcacgggaaggccagtgggcctcataaggaatcaaactcatcagcaaag
agtccacagttccttccctcttcctctgctcctggtaactcaaatccccaccaccctagc
ctcgccctaggacactcccatatccctagtgctgttgtcttgcccaacgctacacatgac
caacctaaccttgataacggagatgagactctaccacattcttctgaaaaaaagctgaag
aacacagattctaagggaagtaggaaagagcaaaagaggtctgtggatgcgaggaatacc
ctaaatgaccttttaaaacatctcaatgactctgtggccaaccccagcgccattctccaa
gagggatcggggcctcggccaaggccacagctcacactggagcctatggacgaactgact
gaagtaccccccaaggtccccagtcgtgaggcttccttgtactcaccttcctcctccctg
ccaaggcacagccccaccaagagggttgatgtgcccatgcccagcgcccccactacacca
acaggaagcctgagcatgggaggaaccctggaaaggcaaagaggggggtaccaactccac
cggagtgcctctcacaggcactctttatccacctcacctaatggggtgaccatgggggtt
tctgtatcccgccaacaaagtatgaacagagggggttacatgcccccaacacccccctcc
agacttgattcccacggtgcagtcatggcgccagggatgcactcaccacacccatcatct
gtgtcccgtcagggcagctacagtgggcatggctcactcccgcgcacagggcttaaacgg
accccatcgataaagccagatgtgccccctaaacccaatggattttctcagcaacagact
ccacaaatgcgggtggtcaacaaatacagttattag
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