Cololabis saira (Pacific saury): 133459842
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Entry
133459842 CDS
T09849
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc)
KO
K04646
clathrin heavy chain
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04142
Lysosome
csai04144
Endocytosis
csai05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133459842 (cltca)
04142 Lysosome
133459842 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133459842 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133459842 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133459842 (cltca)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
133459842 (cltca)
Exosome [BR:
csai04147
]
Exosomal proteins
Proteins found in most exosomes
133459842 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
133459842
NCBI-ProteinID:
XP_061596148
LinkDB
All DBs
Position
14:22221929..22257973
Genome browser
AA seq
1678 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQTQVVIIDLADPNT
PIRRPISADSAIMNPASKVIALKASKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKIEGNSEESTLFCFAVRGQAGGKLHIIEVGTPATGN
QPFPKKAVDVFFPPEAQNDFPVAMQISAKHNVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYINNVLQNPDLALRLAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQTVPTQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASVL
LESNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFISEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEDLLSWFLQE
SKNECFAACLFTCYDLLRPDVVLETAWRHNIMEFSMPYFIQVMREYLSKVDKLETSESVR
KEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYQAPAGYGQPAAQPGFGYGM
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccattcgcttccaggagcacctgcagctccaaaatttaggaata
aatccggccaacataggcttcagcaccttaactatggagtctgataagttcatctgtgtc
cgggagaaagtgggcgagcagactcaggtggtgataattgacttggccgaccccaataca
cctatccgcaggcccatctcagccgacagcgccatcatgaatccagccagcaaagtcatt
gctctcaaagcgtccaaaactctacagatctttaacattgagatgaagagcaagatgaag
gcacacaccatgacggacgacgttaccttttggaagtggatctccctaaacacagtcgca
cttgtgactgacaatgctgtctaccactggagcatggagggcgactcgcagcctgtgaag
gtgtttgaccgccactccagccttgcaggctgtcagatcatcaactaccgtactgacgcc
aagcagaaatggctcctgctcattgggatctcggctcagcaaaatcgagtggtcggagcc
atgcagctctactccgtggacagaaaggtttctcagcctattgaaggtcacgctgccagc
tttgcccagtttaagatagaaggaaattctgaagagtcaactttgttctgcttcgctgtc
agaggccaggctggaggcaagctgcatatcattgaagttgggaccccagcaactggtaac
cagccatttccaaaaaaagcagtggatgtcttcttccctccagaagcccagaatgacttt
cctgtggccatgcagatcagcgccaagcacaatgtggttttcctcatcaccaaatacggc
tacattcacctgtatgacttggagacaggaacctgcatctacatgaaccgcatcagtgga
gagaccatctttgtcactgctccacatgaggcaacctcaggcattattggagtcaacagg
aagggacaggttctgtctgtatgtgtggaagaggaaaacatcattccgtacatcaacaac
gtgctccagaatccagatcttgctctccgattggctgtccgcaacaaccttgcaggtgct
gaagagctctttgcacgcaagttcaacaacctatttgctgccggcaactactccgaagct
gccaaagttgctgctaatgcaccaaagggtatcctgcgcaccccagacactattcgacgc
tttcagactgttcccactcagccaggacagacctctcccttgctgcaatacttcggtatc
ctgttggaccagggccagctaaacaagtttgagtccctggagctttgcaggcctgtcctc
cagcagggacgaaagcaacttctggagaagtggttgaaggaggacaagttggagtgttcg
gaggaactcggtgacctggtgaaggctgtggatcccaccttggctctcagtgtctacctg
agggccaatgtccccaacaaagttattcagtgctttgcagagactggtcagttccccaag
attgttctgtatgccaagaaggtgggctatactccggactggatcttcctgctccggaat
gtgatgcgcatcaatccagaacaaggtctgcagtttgcccagatgttggtccaggatgaa
gaaccactggctgacatcacacagattgtggatgtcttcatggagtacaacctgatccag
cagtgcacctctttcctgcttgatgctctaaagaacaacagaccctcagaagggccactg
cagactcgtctgttggagatgaatctcatgcatgccccccaggttgctgatgctattctg
ggcaaccagatgttcaccaactatgatcgcgctcacattgcccagctgtgtgagaaggct
ggactcctacaaagggccctggagcactacacagacctgtatgacatcaagcgtgctgtg
gtgcacacacacctgctcaacccagagtggctggtgaactactttggctcgttgtcagta
gaagactctctggagtgtctcagggccatgctctcagccaacatccgccagaacctgcag
atctgtgttcaggtggcctccaagtaccatgaacagctcagcacacagtctctcactgaa
ctctttgagtccttcaagagctttgagggtttgttttacttcctgggctctatcgtaaac
tttagtcaggatcctgaggtccacttcaaatatattcaggctgcctgcaagactggccaa
atcaaagaggtggagagaatctgcagagagagcaactgttatgatcctgagcgtgtcaag
aacttcctgaaggaagccaaactcactgaccagctaccgctgatcatcgtctgtgaccgt
tttgactttgtccatgacctggtcctctacttgtaccgcaacaacctgcagaagtacatt
gagatttatgttcagaaggtaaatcctagccgtctgcctgttgtcgttggtgggctccta
gatgtggactgctctgaagatgtcatcaagagcctgatcttagttgtcaggggacagttc
tccactgacgagctggtcgctgaggtggaaaagaggaacagattgaagctgctgctgccc
tggcttgagtctcgtatccatgaaggctgtgaagagcctgctacccacaatgcccttgca
aagatctacattgacagcaataacaaccctgaacgcttcctgcgtgaaaaccctttctat
gacagccgcgtcgtgggaaagtactgcgagaagagagaccctcatctggcctgtgttgca
tatgagcgagggcagtgtgaccaggagcttatcaatgtttgcaatgagaactcccttttc
aagagcctttctcgctaccttgtccgacgtaaagatcccgatctgtgggccagtgtcctg
ctcgaaagcaaccccttcagacgacagctcattgaccaggtggtgcaaacagcactgtca
gaaacccaggatccagaggaggtatcggtcactgtcaaggctttcatgactgccgactta
ccaaatgagcttattgaactgctggagaagattgttttggacaactccgtcttcagtgaa
cacagaaatctgcagaatctgttaatcctgacggctatcaaagctgaccgcacgcgtgtg
atggagtatatcagcaggttagacaactatgatgctccagatatcgcaaacatcgccatc
agcaatgagctcttcgaggaggcttttgccatcttcaagaagtttgatgtcaacacctct
gctgtgcaggtgctaatcgagcatattggtaacctggaccgggcctatgagtttgcagaa
cgttgtaatgagccagcagtgtggagccagctggccaaagctcagctacagaaaggcctg
gtgaaggaggccattgactcctacatcaaagctgatgatccctctgcgtacatggaggtg
gtacaggctgctgacaagagcggaaactgggaggacttggtcaaatttcttcagatggct
cgtaagaaggcccgtgaatcctacgtggagacggagttgatctttgctttggcaaaaact
aatcgtctagctgaactggaagagttcatcaatggccccaacaatgctcacatccagcag
gttggtgaccgctgctatgacgagaaaatgtatgaagcggctaaactgctctacaacaac
gtctccaactttggccgcctggcttcaacgctggtgcacctcggggagtaccaggctgct
gtggatggcgcccgtaaggccaacagcactcgcacgtggaaggaggtgtgcttcgcctgt
gtggatggagaagagttcagactcgcccagatgtgcggcctccacattgtggtgcatgct
gacgagctggaggaactgatcaactattaccaagaccgcggctactttgaggagttgatc
actatgctggaagcagcccttggcctggagcgtgctcacatggggatgttcacagagcta
gcaatcctctactccaagttcaagccccagaagatgagggagcatctggagctcttctgg
tcacgagttaacatcccaaaagtcctgagagcagcagagcaagctcacttgtgggccgag
ctggtcttcctgtacgacaagtacgaggagtttgacaatgctatcatcaccatgatgaat
cacccaacagatgcttggaaggagggacagttcaaagacatcatcaccaaagtggccaat
gtggagctatactacaaagccacacagttctatctggagttcaagcctttgttactgaat
gatctgctcattgtgctctcccctcgactggaccactcacgtgctgtcaacttcttcagc
aaggtgaaacagctgcctctggtcaaaccttacctccggtcagtacagaaccacaacaac
aaatcggtcaacgaagcacttaacaacctcttcatctcagaagaagactatcaggcactg
agaacatcaatagatgcttatgacaactttgacaacatctcgctggcccagcgcttggag
aaacatgagctgattgagttcagaagaattgctgcctacctctttaaaggcaacaaccgc
tggaaacagagtgtggagctctgcaagaaagacaagctttataaggatgccatgcagtat
gcgtcagagtccaaagacacagagctggcagaggatctgctctcctggttcctacaggag
agcaagaatgagtgtttcgccgcctgccttttcacctgctatgacctgctgcggcccgat
gtggttctggagaccgcctggaggcacaacatcatggagttttctatgccatacttcatt
caggtcatgagggagtacctcagcaaggtagataaacttgaaacctcagagtctgtaaga
aaagaagaggagcaggcaacggagacacaacccatcgtctatggaacaccccagttgatg
ctgacggcgggtcccagcgtacctgtgccccctcagcaagcttacggctacggctaccag
gcccccgcaggatacggccaaccagcagctcagccaggctttggctacggcatgtaa
DBGET
integrated database retrieval system