Cololabis saira (Pacific saury): 133459845
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Entry
133459845 CDS
T09849
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133459845 (rnft1)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133459845 (rnft1)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133459845 (rnft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
zf-RING_6
Prok-RING_4
zf-RING_16
PI_PP_I
zf-Nse
Motif
Other DBs
NCBI-GeneID:
133459845
NCBI-ProteinID:
XP_061596151
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Position
14:complement(22356267..22362569)
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AA seq
420 aa
AA seq
DB search
MKLRVQNDRIDPRRVLKPRESPAVMQPYSSEGNGLSLTLQPELLTRTPVTPAAAAGPDSN
EVRVTMTGGPGESSGGASSRRSRVGSHSHSHSHPHGHDRAQRGSSSEPELDPPDPDLDSG
EPSTSLSELRCLFRWLQKSLPFLIILCAKLVIQHALGLAVGVGLFTTFLYVNKNIQTQAF
LQDRHSKLQCIWLFVFLVFSTLLLYYTFLTETLYHCLIFLSPSIDPLGFWEILWAVGTTN
FIIKFLFMGIKCLILLLPSSLVSYRTQGRWLMLTEELGQVHQATAPVPLWFRYLVTYQEA
DGNLGLTLGVLLALVYLILKLLGLYSQWTSLLKTVRVFLAGEHTGMAATRGQCSEAGDVC
PICQGEYKEPRTLLCQHIFCDECIALWFNREKSCPLCRTVITEKVYKWRDGATSPHLQIY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccgggtgcagaatgacagaattgatcccagaagagtactgaaaccgagggag
tctcctgctgtcatgcagccttattccagtgaggggaatggtttatccctgaccctgcaa
ccagagcttctcaccaggacaccggtcacccccgccgcggccgccgggcctgacagcaac
gaggtgcgggtgaccatgaccggcggtcctggggagtcgagtggaggcgcttcctccagg
aggtccagggtcggctcccacagccactcgcattcacatccgcacggacacgatcgggcg
cagcgcggctccagttctgagccggagcttgaccccccggacccggatctggactctggg
gaacccagcacctccctgtctgagcttcgatgtctgttccgctggctccaaaagagtctt
cctttcctcatcatattgtgtgctaaactggtcatccagcatgctctaggtttagcagtt
ggggttggcctcttcacaacgtttttatatgtgaataaaaacattcaaactcaagctttt
cttcaggatcgccactcaaagctgcagtgcatttggctgtttgtgttcctcgtcttttcc
accctcctgctttactacacctttctcactgagacactttatcattgcctcatctttctc
agtccctccatcgaccccctgggtttctgggagatcctttgggcagttggcaccaccaac
ttcataataaagttcctctttatgggaattaagtgccttatcctgctgctgccctcgtcg
ttggtgagctacagaacccaggggcggtggctgatgctgactgaagagctgggtcaagtc
caccaggctacagcgcctgttccactctggtttcgctacctggtcacctaccaggaggct
gacggcaacctcgggctcacgctgggggtcctgctggctctggtctacctcattctgaag
ctgttaggattgtacagccagtggacgtctttactgaaaactgtgcgggtgttcctagcc
ggcgagcatacaggcatggcagcaacaagaggtcagtgtagcgaggcaggagatgtctgt
cccatctgccagggggagtacaaggagccccggactctgctctgccagcacattttctgc
gacgagtgcatcgctctgtggttcaaccgggagaagagctgccccctctgccgcacagtc
atcacagagaaggtctacaaatggagggacggcgccacgtctccacacctgcagatttac
tga
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