Cololabis saira (Pacific saury): 133459930
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Entry
133459930 CDS
T09849
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
csai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133459930 (usp8)
04137 Mitophagy - animal
133459930 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133459930 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133459930 (usp8)
04121 Ubiquitin system [BR:
csai04121
]
133459930 (usp8)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133459930 (usp8)
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133459930 (usp8)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Others
Others
133459930 (usp8)
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133459930 (usp8)
BRITE hierarchy
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
133459930
NCBI-ProteinID:
XP_061596322
LinkDB
All DBs
Position
2:complement(21378527..21393429)
Genome browser
AA seq
1082 aa
AA seq
DB search
MPAVSTGVKELYLSTSLGELNKKAEIKPDKTSTRSYVQSACKIFKAAEECRLDKDEEKAY
VLYMKYLSVYDIIKKRPDFKQQMEYYVTMLGPTSFKKAIEEAEKLSESLKLRYEEIEVRK
RLEERERLEEKKKREEITVKDSGRGSPKPTSANKKDSKKVKGEQNELKSVITKAAQPAGG
ITAEKLFHMMKDQTISIIVMDARSQGDYEESHIQVPAQTCISVPEEAVSPGITVNQIEAK
LPEVSKDLWRQRGFVDYVVLLDWFSSVADLKLGTTLKSLKDALYKWDSITILRSEPVVLE
GGYENWLLFYPMYTTNAKVRPPRQTLINTLPQLNFSYPSLEEPKPPAQPQPEVSSESHEP
SAPVLVNGVAPAEPPTSKTAIVADRLPDTMDSPVTGSTNTGLELSKKAPASSQSPATARA
FPQFDRTKKPSVQVSDETKPSQNGSARDSAKNGPFVPDRSGKPPTNSSTSLSKEEQSQIH
SEVVAVMEKAKQEQEKRVQERRLEEERREKERQERDGKERLEREESEKKTQEEKRHQDKK
KLERQKAEEEDDKENRTCDERRGKEPNSETPSKSMSLDSPAPNHVVNEIKREPLTRARSE
EMGRSVPGLPVGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTAKQKPAR
QAEPDTSGEREREQSKLKRSYSSPDISQDLREEAQKKTTAPTTAAVIPTINRETKPVCAK
VYSKVEIARPSAAKIRNLNPTFGGLGASLTGLRNLGNTCYMNSILQCLCNTPIMADYFNR
NDYLDDINRYNILGHKGEVAEEFGVIMKALWSGLYKWISPRDFKITIGKINEQFACYDQQ
DSQELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADLAWSKHKLLNESIIVALFQ
GQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRH
CKAHRDSTKKLEVWKVPPILLVHLKRFSYEGRWKQKLQTTVDFPLDCLDLAQYVIGPKQN
LKRYNLYGVSNHYGGLDGGHYTAYCKNVLKQRWYKFDDHEVTDMTTTSVKSSAAYILFYS
TL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagtgtctacgggggtcaaagagttgtacttatccacatctctgggagaactc
aataaaaaagctgaaatcaagccagacaagacaagtaccaggagctatgttcagagtgcc
tgcaaaatcttcaaggcagcagaggaatgtcgtcttgacaaagatgaggaaaaagcttat
gtattgtacatgaagtatttaagcgtttacgacatcataaagaaaaggccagacttcaaa
caacaaatggagtattatgtaactatgcttgggccaactagcttcaagaaggccattgaa
gaagctgagaagctgtctgaaagccttaaactcaggtatgaggaaatcgaggttcgaaaa
aggcttgaagaaagggagagactagaagagaagaagaaaagggaagaaataacagtgaaa
gatagcggtaggggctctccaaaaccaacatctgcaaacaagaaggacagcaaaaaggtg
aaaggagagcagaatgaactgaagagtgtaattacaaaagctgcccagccagctggtggg
atcacagctgagaaactttttcatatgatgaaagaccagacaatctcaataattgtcatg
gatgcccgcagccaaggagactatgaagaatctcacattcaggtcccggcccagacctgc
atcagtgtgcctgaggaggctgttagccccggaatcaccgtgaatcagattgaagcaaag
ttgccagaagtgtccaaggatctttggaggcagcggggatttgtggattatgtagtccta
ctggactggttcagttctgtcgctgaccttaagttgggcaccaccttgaagagcctcaaa
gatgccctgtataagtgggacagtatcaccattctgcgcagcgagccagtggtcctggag
gggggctatgagaactggctgctgttttaccccatgtacacgaccaatgctaaagttcga
cctcctagacagactttaatcaacacactccctcaattgaacttcagctacccatccttg
gaagaacccaaacctccagctcagccccagcctgaggtttcatctgagagtcatgagccg
tctgctccggtgctggtgaacggggttgcacctgcagagcccccaacatccaagacagcc
attgttgcggataggttgccagacactatggatagcccagtaacaggctctacaaatact
ggtctagagctaagtaagaaagctcctgcatccagccagtcaccagcaacagccagggct
ttcccccagtttgaccgtaccaagaaaccctctgtccaggtgtcagatgagactaaaccc
agccagaatggatcagcaagagattccgccaaaaatggtccatttgtccctgaccgctcc
ggcaaacctcccaccaactccagcacttctctgtctaaagaagaacaaagtcagatacac
tctgaagtggtggcagtgatggagaaggcaaagcaagagcaggagaagcgggttcaggag
cgccgtttagaagaggaaaggcgagagaaggagcggcaagagagagacgggaaagagaga
ttagaaagggaggagagtgaaaagaagacgcaagaggagaaaagacaccaagacaaaaag
aaacttgagaggcaaaaggcagaagaagaggatgacaaagagaacaggacatgtgatgag
aggaggggaaaagagcccaactctgaaaccccctccaaaagcatgtcgctcgactcacct
gctcccaaccatgttgtaaatgaaattaagagggaacctttaacgagagcaagaagtgag
gagatggggaggagtgtgccaggtctacctgttggttggatgaagttccttgacacagtg
acagggacctacagatactaccattcaccgaccaatcgcgtccacctgtacccccctgaa
gttacggttcctcagactcctccttccacgccgccaacagctaaacagaagccagcgcga
caagctgagccagacaccagcggtgagcgagagcgggaacagtcgaaactgaaacgctcc
tactcctccccagacatcagccaggacctgagagaggaggcccagaaaaagaccaccgct
ccaaccactgctgctgtcatacccaccatcaacagagaaaccaaacctgtctgtgcaaag
gtatattctaaagtggagattgcacggccatctgcagcaaaaattcgcaacttaaaccct
acatttggaggtttgggtgcctcactcactggccttcgcaacctgggaaacacatgctac
atgaactccatcttacagtgtctttgcaacacacctatcatggctgattacttcaacaga
aatgattaccttgatgacattaacagatacaacattcttggccataaaggggaggttgca
gaggagtttggtgtgattatgaaggctttgtggagcggtttgtacaagtggatcagtcca
cgggacttcaagatcaccatagggaagatcaatgagcagtttgcatgctacgaccagcag
gactcccaggagctgctgctgttcctcatggatgggctacatgaagacctcaacaaagcg
gacaacaggaagcggtacaaagaagaggaaaacgaccatctggatgatcagactgcagct
gacctggcctggagcaaacacaagctgcttaatgagtccatcattgtagcactgttccag
gggcagttcaagtccacggtgcagtgtctgacctgccatcgcaagtcacgaacatttgaa
accttcatgtacctgtccttgcctctggcctcaaccagcaaatgctccctgcaggattgt
ctgagattattctctaaagaagagaaactgaccgacaacaataaggtgttctgcagacac
tgcaaagcccacagagattccaccaagaagctggaagtctggaaggttcccccgatactt
ctggtgcacttaaaacggttctcatatgaaggcagatggaaacaaaagctgcagacaact
gtggacttccccctggactgtctggacctggcccagtacgttatcggacctaaacagaat
ctgaagagatacaacctttatggagtttcgaaccactatggggggttagatggaggccat
tacacagcctactgtaagaatgtcctcaaacaacgctggtacaagtttgacgaccacgaa
gtgactgatatgaccaccacctctgtcaagtcttctgcagcttacatcctgttttactcc
accctgtga
DBGET
integrated database retrieval system
