Cololabis saira (Pacific saury): 133459968
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Entry
133459968 CDS
T09849
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133459968 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133459968 (nup98)
03036 Chromosome and associated proteins [BR:
csai03036
]
133459968 (nup98)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133459968 (nup98)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133459968 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
133459968
NCBI-ProteinID:
XP_061596389
LinkDB
All DBs
Position
14:31851200..31887079
Genome browser
AA seq
1843 aa
AA seq
DB search
MFNNSFGTPFGGGAGFGASSTFGQQNAGFGTAGGFGTSTFGATTNTGGLFGSTQNKPGLG
TSALSSRIPPGGLFGASTFSQPATSSTSTGFGFGPASGTSTSLFGSTGTGTSGGLFSQQN
NAFGANKPTSFGSFGTSTASGGLFGSTNTTSNPFGGSNSLFGGSGFSANQQPGTTVKFNP
PTGSDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPIAAATGGL
FGGATATSSATTGLFGASAANTSFSFGQNKNTFGPAAAGGFGATTGGLFGPPNQPAASLF
KPFNQTTTAQSTGFSFGNTNTMGQANTSSMGLFGSTGPTQSAGLFGAAQTSTATGFGAST
GLFGQPNTGFGNVGTQPSLFGNKATGFGTTTTSASSFGTGTGLFGTKPALTLGTGTNTST
FGFGANPAGASLFGSKATTGGLGTGLGTTFGTVGAGPTLFGSNQNKLGNTLSTMGTFGTT
GFNTGASTLGFGTAQQPVALTDPNANAAQQALLQQQLSVLAYSPYGDSPLFRNPLSDPKK
KEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALTSSGASKSQLFDGLDDDEPSLTN
GAFVPRKSIKKLMLKNLNSSQYSSPLSKDSDELGSPAEFRQNGHSHTMEEDELREVPGRS
NRMDDDPEVSQFYVNPIAKPIPQGRAQISLQDTISDLNMHKPSRNGQEVSSDDISASLGE
DSLQEDRDEEEPQHEFPESPHPAGIILNRVGYYTIPSLEDLAEMTDENAACVVENFTIGR
KGYGSIFFPGEVNVTGLNLDEIVHFRRKEVIVYPDDKNKPQEGEGLNRRAEVTLDGVWPN
DKTSCTQIRSPERLTDMNYEGRLEKASRKQGARFLEYRPETGSWVFEVVHFSKYGLQDSD
EDEDVPLKTDPKKLKTMMSLPGSKLQQLLPPSQQQVAPQAQSVADLMSGVAELDSDMADI
TQSIPTESMLGGEDDGDLSPGEVDATVAKLGSSVSDHNGDLTCTTITSSLGINPHTLQIM
KASLFAEDDDEGDMFHDQGAMKISDVSSPRLIIPGAQGRPSIGGLLQTRFTSGLLAQLPE
SPRPLLPSSWASPAAAETSRSSQWKGPGPSSFMLPSKAPEPSIRTVGVRRLAGPVPLKES
VTRGKGGLLMDTGLFTTRSFRVGWGPGWTLAHCGIHLSSPTSAQLHQQELSSKTDFSFLP
KPSRTKPLTESPYKVVLEQLVGLEPPQLKTSEDEDEEEQSQAVLQRPLEIHLKHSSVGIP
DGSACPLVQPLAGVAALHEYAEWITDLNDQQRDAEPLLDNWAEVWTLCEALWGHLGPSDQ
EPDAEMSEYKQQLQRRQSFSAWLSHGATSRVEEEVALAGKGCHTDAIFSYLTGNRISEAC
RVAQKEGDHRLSLLLAQALGSQDCRDLLALQLADWNRMQTDCYLTEERLRIFTLLAGKPV
WHSSDSVVNVCSELDWKRCVALHLWFMLPPTASVADALTKYEAAFQGSVEGGKYCCAPLP
PYLQEEEPEDEEEESKRPLFDLCFHLLKLYSDRHYSLQQLLDPLTVTWQRLDYRLSWHLW
GVLQALNYSHLSASRQGLLHASYAAQLESAGLWHMAVFILLHIPNHAQRERAIREVLTLH
CPLHDTDQSVQRERFLTERLLIPETWIHEAKATRAHRHGDRHQQALHLYRAGHWSQCHRL
LIRHLASDCIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGRVYLDYIRVIKTLQDIQQI
ESAGYELERLYTDVTSLCSRIELLPCSTARDRLAQSEMAKRVANILRVVLSLQQGDTAAS
DSLSIPLAQLAPHISRLPMPEDYTLEELRGLTQSYLRQLIVSQ
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaactcgtttggcactccgtttggtggaggtgcggggttcggtgcctcgtcc
acctttggtcaacaaaacgctggctttgggacagcagggggctttgggacttctacattt
ggggcgaccaccaacacaggaggactgtttggctccacgcagaataaacccggtcttgga
acttcagctctgtcctctcggatccccccaggtggactgtttggggccagcacattcagc
caaccagccacttcttcaactagcaccggcttcggcttcgggcccgccagtggtacttcc
accagcctctttggcagcactggaacaggcaccagcggtgggctcttctcccaacagaac
aatgcctttggggccaacaaacccacctcttttggaagctttgggacgagcacagccagc
ggcgggctctttgggtcgaccaacaccacatccaaccctttcggtggctcaaactcgctg
tttggaggctctggcttctcagcaaatcagcaaccaggaaccaccgtgaagttcaaccct
ccaaccggaagtgacacaatggtgaaagcgggcgtgaccactagcatcaacaccaaacac
cagtgcatcactgccatgaaggagtacgagaacaaatcactggaggagttgaggctggag
gactatcaggcaggcaggaagggcccaaccaaccccattgccgcagctacgggtggactg
ttcggtggggccacagccacgtccagtgccacgaccggcctgttcggtgcctcggctgcc
aacaccagcttctccttcggccaaaataagaacacatttggaccagcagctgcaggtggc
tttggtgcaaccacaggtggtctgtttggcccaccaaaccagcctgctgccagcctcttc
aaacctttcaatcagaccaccacagctcagagcactggcttctcctttggcaacaccaac
acaatgggccaggcgaacaccagcagcatggggttgtttggaagcacaggccccacccag
tcagccgggctgttcggggcggcccaaaccagcacagccacaggttttggggcgtctact
gggttgtttggccagcccaacacaggatttggaaacgttggaacacagccaagtctattt
ggcaacaaagctaccgggtttggcaccaccaccaccagcgcctcgtcctttggcacgggc
accggactctttggtaccaagcctgctctcactctgggaactggaaccaacacgtccacc
tttggctttggtgcaaaccctgcaggagcgagtctttttgggagcaaggccaccactgga
ggactagggactggactgggaaccacttttggaactgttggggctggtcccactttgttt
ggaagcaaccagaacaaattgggcaacacgttgagtacgatgggaacgttcggaacaact
ggattcaacactggagcaagcacgctgggcttcggaacagcgcagcagcctgttgcactc
acagatcctaatgccaacgctgcccagcaggccttgcttcagcagcagctcagcgtcctg
gcgtactcaccgtatggagactcgccgcttttccgaaacccgctgtcagaccccaagaaa
aaggaggagcgtctgaaaccgaccaatccgacggcccagaaggctctgaccacacccacc
cactacaagctgaccccccgcccagcaaccagagttcgacccaaagccctcacatcttca
ggagcctccaagtcgcagctgtttgatggtctggatgatgacgagccttcactcaccaat
ggagcctttgtacccaggaaaagcatcaagaagctgatgttgaagaacctgaacagtagc
cagtacagcagtccgctgagcaaagacagtgatgagctcggctcacctgcagagttccgg
cagaatggacacagccacacaatggaggaggatgaacttcgtgaggttccaggtcgaagc
aaccggatggacgacgatccagaagtctctcagttctatgtgaatcccatcgccaagcca
atcccacaggggcgcgctcagatcagcctgcaggacacaatcagtgacctgaacatgcac
aaaccgtctaggaacgggcaggaggtgagcagcgatgacatctctgcatcactgggggag
gattctctgcaggaggacagagacgaggaggagccgcagcatgagtttcctgagtctcct
catcctgcagggattattctgaaccgtgtgggttattacaccatcccctcgctggaagac
ctggctgagatgacggatgaaaacgcagcctgtgttgtagaaaacttcaccatcggcagg
aaaggttatggctccatcttcttcccgggtgaggtgaatgttaccggcctgaacctggac
gagattgtccacttcagacgcaaagaggtcatcgtgtatccggatgataaaaacaagccg
caggagggggagggacttaacaggcgggctgaggtgactttggatggtgtttggcccaac
gacaagacgtcctgcactcagatcaggagccctgagcgtctgaccgacatgaactacgag
ggccgtttggaaaaggcctcacgcaaacagggagcccgtttcctggagtaccgacccgag
accggatcctgggtgtttgaggtggtgcacttctccaaatacgggctccaggactctgat
gaggatgaagatgtcccgcttaaaaccgaccccaagaaactgaagaccatgatgtcactt
cctggctccaagctgcagcagctgcttcctccttcccagcagcaggtggcgccgcaggct
cagtccgttgctgatctcatgagcggtgtcgcagagttggacagcgacatggctgacatc
acacagagcatcccgacagagagcatgctgggaggcgaagacgacggtgacctgtcgcct
ggggaggtggacgcaactgtagcaaaactcggcagttcggtgtcggaccacaacggcgac
ttgacgtgcaccaccatcacctcgtctctggggatcaacccacacactctccagatcatg
aaggcatccttgtttgctgaagatgacgatgagggtgacatgttccatgatcagggagcg
atgaagatctctgacgtctcgtctcctcgcctcatcatccctggagctcagggccgaccc
tccatcggtggacttcttcagactcgtttcacatccggcctgcttgctcagctcccagag
tcgccccgccctcttcttccttcgtcctgggcgtctccagctgcagctgagacctcacga
tcatcacagtggaagggcccaggcccctcctctttcatgctaccttccaaagctcctgag
ccttcgatcaggacggtcggtgtccggcggttggcaggtcccgtacccctcaaagagtcg
gtcactcgggggaagggaggcttgttaatggacacagggctgttcaccacccgctccttc
cgggtgggctggggccccggctggacgctagctcactgtggcatccatctgagctcgcct
acgtccgcacagctccaccagcaagagctcagttccaagaccgacttcagcttcctgcca
aaaccttccaggactaaaccactgacagaaagcccctacaaggttgtgctcgagcagctg
gtgggtctggagcctccacagctgaagaccagcgaggacgaagatgaggaggagcagagc
caggctgtgctgcagcgccccctggagatccacctgaagcacagcagcgtgggcattccc
gatggatccgcatgtcctctggtgcaaccgttggccggcgtggcggcgctgcacgagtac
gccgagtggatcaccgatctgaacgaccagcagcgtgatgcagaacccctcctggataac
tgggctgaggtgtggactctgtgcgaggccttgtggggccacttgggcccctcggatcag
gagccggatgcagaaatgtcagagtacaaacagcagctgcagaggaggcagagcttctct
gcctggctgtcccacggcgccaccagcagagtggaggaggaggttgcactggcggggaag
ggttgccacacagacgccatcttcagctacctgacaggaaaccgcatcagcgaggcgtgc
cgagtcgcacagaaggaaggagatcaccgcctgtcgctgctgctggctcaggctctgggc
tctcaggactgccgggacctgttggcccttcagctcgccgactggaaccgcatgcagacc
gactgctacctgaccgaggagcgacttcgcatcttcacgctgctcgctggaaaacctgtt
tggcattcatctgactcggtggtgaacgtgtgttcggagctcgactggaaacgttgcgtg
gccctccacctctggttcatgttgcctccaactgcgtccgtggccgacgccctcactaaa
tatgaagccgcctttcagggctcagttgagggaggaaagtactgctgcgccccactgcct
ccctacctgcaggaggaggagccagaagatgaggaagaggagtcgaaacggccgctattt
gacttgtgctttcatctgctgaaactctacagtgacagacactacagcctgcagcagctg
ctggacccgctgacggtcacctggcagcgcctggattaccggctgagctggcacctgtgg
ggcgtcctgcaggcgctgaactacagccacctgagcgcgtcgcggcagggactcctccac
gccagctatgccgctcagctggagagcgccggcctctggcacatggccgtgttcatcctg
ctgcacatccccaaccacgctcagcgcgagcgggccatcagggaggtgctgaccttgcac
tgccccctgcacgacacagaccagtccgtgcagcgtgagcgtttcctgaccgagaggctg
ctgatcccagagacgtggatccatgaggccaaggccacccgagcccatcgccacggtgac
agacaccagcaggccctgcacctgtaccgggccggacactggagccagtgccaccggctg
ctgatccgccatctggcctcagactgcatcatcaacgacaaccacgattaccttctggag
ttcctggagggtctggcggttcctgaacacagcgccaccatccaggactgggacaccgct
gggagggtttacctggactacatcagggtcataaagaccctgcaggacatccagcagata
gagagtgctggttacgagctggagcgtctctacactgacgtgacgtcgctctgcagcaga
atcgagctcctgccctgcagcactgccagagaccgcctcgcccagtcagagatggcgaag
cgcgtggccaacatcctgcgcgtggtcctgagccttcagcagggtgacacagcggcatca
gactccctcagcatcccgctcgcccagctggcgccgcacatcagccgcctgccgatgccg
gaggactacacactggaagagctgcgagggctcactcagtcgtacctgcggcagcttatc
gttagccaatga
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