Cololabis saira (Pacific saury): 133460184
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Entry
133460184 CDS
T09849
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133460184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133460184
03036 Chromosome and associated proteins [BR:
csai03036
]
133460184
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133460184
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133460184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHD_4
PHDvar_NSD
Lar_restr_allev
zf_RING_Vps8
PHD_2
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
133460184
NCBI-ProteinID:
XP_061596729
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All DBs
Position
14:165795..178814
Genome browser
AA seq
418 aa
AA seq
DB search
MLSNSPLCVWFGFVRMGEQYYRDALEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIW
MEKRHRGPGMAPGQLYTYPARRWRKKRRSHPPEDPRLIFPPVKSEVDLGLKKDSLLSSDG
SSLEALLKGESLDKRTAADVRASEDDSNQSDYTGSLNPASRIRKRIIEPEDFLDDLDDED
YEEDTPKRRGKGKGKGRGVGSSRKKLDTAALEDRDKPFACDNTIKQKHFSKSSERVCGKR
YKNRPGLSYHYAHSHLAEEEGEDKDDMEIQEPVLPPPEETKTAPKKGPDGLALPNNYCDF
CLGDSKTNHKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNMCGT
SENDDQLLFCDDCDRGYHMYCLNPPMAEPPEGSWSCHLCLELLKEKASIYQTQNAPTS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaaactccccactgtgcgtgtggtttggttttgtcaggatgggggagcagtac
taccgagatgccctggagcagtgtcacaactacaacgcccggctctgtgctgagaggagc
gttaggatgccgttcctggactcccagaccggtgtggctcagagtaactgctacatctgg
atggagaagagacacaggggaccaggcatggctccagggcagctgtatacctacccagcc
aggaggtggaggaagaaacggagatctcatcctccggaggaccctcggctcatcttccct
cctgtcaagtcagaggtagatttaggcctgaagaaggactctctgttgtcgtcagacggc
agcagtctggaggccctgctgaaaggagaatctctggacaaacggacagctgcagacgtc
cgcgcgtccgaggacgattcaaatcagagcgactacaccggaagcctgaacccagcctcc
cggatcagaaagagaatcattgagccagaggacttcctggatgatcttgatgatgaagac
tacgaagaagacacgcccaaaagaagaggcaaaggaaaagggaaggggcgaggagtcggc
agcagcaggaagaagctggacacggcagcgctggaggacagagacaagcccttcgcctgt
gacaacactatcaaacaaaagcatttttcaaaatcttctgaaagagtctgtgggaaacgc
tacaagaaccgccccggcctgagctaccactacgctcactcccacctggccgaggaggag
ggcgaggacaaggacgacatggaaatccaagagcccgtcttgcctccgcccgaggagacg
aagacagctcccaagaaaggtccagatgggctcgctctgcctaataactactgtgatttc
tgcctgggagactccaaaaccaaccacaagactggccagtcagaagagctggtctcctgt
tctgactgtgggcgctcaggccacccctcgtgcctgcagttcactccggtaatgatggct
gctgtgaagacgtaccgctggcagtgcatagagtgcaagtgctgcaacatgtgtggcact
tcagagaatgacgatcagcttctgttctgtgatgactgtgatagaggctaccacatgtac
tgtcttaacccccccatggctgaacctccagaagggagctggagctgtcatctatgtctg
gaactgttgaaagagaaggcctccatataccagacccagaacgcccccacgtcgtga
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