Cololabis saira (Pacific saury): 133460214 Help Entry 133460214         CDS       T09849                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism csai  Cololabis saira (Pacific saury) Pathway csai03440   Homologous recombination csai03450   Non-homologous end-joining csai04218   Cellular senescence Brite KEGG Orthology (KO) [BR:csai00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     133460214 (rad50)    03450 Non-homologous end-joining     133460214 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     133460214 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:csai03032]     133460214 (rad50)    03400 DNA repair and recombination proteins [BR:csai03400]     133460214 (rad50) DNA replication proteins [BR:csai03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     133460214 (rad50) DNA repair and recombination proteins [BR:csai03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      133460214 (rad50)     BRCA1-C complex      133460214 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      133460214 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook SMC_N AAA_21 AAA_15 SbcC_Walker_B ABC_tran zf-met SBP_bac_3 AAA_29 AAA_22 AAA_13 AAA_16 Motif Other DBs NCBI-GeneID:  133460214 NCBI-ProteinID:  XP_061596775 LinkDB All DBs Position 14:complement(5973210..6019078) Genome browser AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGVEDKDKQVISFFNPLTVLVGPNGAGKTTIIECLKYATSGELPPG AKGAAFVHDPKDAHETDVRAQIRLLFTDVNGEKVTVQRSMSCTQKAKNYSFKSLEQVISR MKDGQKVSLPSKCGDMDREMISSLGVSKPVLNHVIFCHQEESNWPLSEGKALKEKFDSIF AATKYIKALETMRQLRLKRSQTVKECQVELRYLKQNKEKAQQIRETLSTKEAQLMTSKNN VQQIESQIDPLENRLMDIDTKLGKVMKIDNDIKALESRKKQMEEDNKELEETMEQVFQGS DEELQEVYQNHQKTVREKERRLTDCQKELEKAGRECQRLNRVKAELLVEQGRLQLESDRQ NQTIKNRDTQVRSLSTYLEMEGYDRPPFTSLQLESFNRHVTQRLEQEKQTLTQILTDLQE KEQQKQNSIDEMRDKKTGLERTVELKRDLQGKKQQELRNIRADLQRLEGSSSRLQELENE LAKAERELQSAVHSSNVEELKAEVEELQREKAKLDRTQRQLDQEMQTLNTHTTARTQMDM LKKDKSEKEEQVRKIKSRHGEDLVSLLGHFPNKRELEDWIYSKSKEINSTRDRLAKINKD LASAEQNRSHTAAELRKKEQQLTEDEEKFFNVCGSQDLEQDLGKLQEDLEKISKQRAMLA GATAVYTQFISQLTEEREPCCPVCQRTFPSESDLQEVISDMQSKLRLVPDKLKNTEQDLK RKERKKDDMMALRPVRQSVVHLREKELPELRNRLQTVNREIERLKADVEEQEALLATLMS EEETAKACLQDISLMDRYLMDLKEVERKIAQQAAKLQGVDLTRTIQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQDQIQMLKSAVNETRAEKLQLSSDMQKQQQLEEQCVEFTTEIQA LTRDIREAKEQLAPLSAALEKLQQEKQELLERRRQKQEEGQEKINAIKERVKVITTLERD ITKYINEGKDEYKEQKESELQETNTQLHEAEKLKEKINKEIGNIRQDIDTQKVQERWLLD NLTLRKRVEELKEVVAKREALLKDMGNMQVHQLRQERRDLERRLEDLKKNRSIALGRQKG FEEEILHYRKELREDQYDKADECYKNKMITMRTTELVIKDLDLYYKALDQTIMKFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVRRRVYNYRVVMVKGDTHLDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLVITHDEDFVELLGRSSYIEHFYRIRKNQDQNSEITKCSITSLSTFLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagatagacaagatgagcattctgggggtgaggagctttggggttgaggataaa gacaaacaagtcatctccttcttcaatcctctaactgttctagttggacctaacggagca gggaaaacgactattattgaatgccttaagtatgcaacatcaggagaacttccccctgga gctaaaggagctgcttttgtacatgatccaaaggatgcccatgagacggatgtgcgagct cagattcgcctcttattcacagacgttaatggagagaaagtcacagtccagcgctccatg tcctgcactcagaaggcgaagaactactctttcaaaagtttagagcaggttattagcaga atgaaagacggtcagaaagtgagcttgccctccaaatgtggcgatatggaccgggagatg atttcctcgttgggcgtatcgaagccggtgctgaatcacgtcatcttctgtcaccaagaa gagtctaactggccactcagcgagggcaaagcactcaaagaaaaatttgactccatcttt gctgcaactaagtatatcaaagctctggagacgatgcgtcagctgcgactcaaacgtagt cagacggtgaaggaatgccaggtggagctgcgctacctgaaacagaacaaggaaaaggct cagcagatcagagagactctgtccacgaaggaggctcagctgatgacgtcaaaaaacaac gtgcagcagatcgagagccagatcgatccgctggagaatcgactgatggatattgacacg aagcttggaaaagtgatgaaaatagacaatgacataaaggcattagaaagcaggaagaaa caaatggaggaggacaacaaagaactggaggaaacaatggaacaggtgttccaaggttcg gatgaggagctccaggaggtttaccagaaccaccagaagacggtgagagagaaagagcgg aggctgacggactgccagaaagagctggagaaagctggccgagagtgtcagagactcaac agagtcaaagcagagctcctggtagaacaaggacgtctgcagttggaatctgatcggcag aatcagaccatcaagaatcgtgacactcaggtgcgctctctgtccacgtatctggagatg gagggttacgaccggccgcccttcacctccctgcagctcgagagctttaaccgtcacgtc acacagagactggagcaggaaaaacagacacttactcagattctgacagatcttcaggaa aaggaacaacagaaacagaactctattgacgagatgagggataagaagacggggctggag aggacggtggagctgaagcgagacctgcaggggaagaagcagcaggagctgaggaacatc agggcagacctgcagaggctcgagggttcatctagtcgcctgcaagaactggaaaatgag ttggctaaagcggagcgtgagctgcagagtgctgttcacagctccaacgtggaggagctg aaggccgaggtggaggagctccagagagaaaaggctaaactcgaccgcacacagagacaa cttgaccaagagatgcagactctcaacacacacaccaccgcacgcacacaaatggacatg ttgaagaaagataagtcagagaaggaggagcaggtacggaagatcaagtctcgtcacggg gaggatctcgtgtccctcttgggtcactttcccaacaagagggagctggaagattggatc tattccaagtctaaggagatcaacagcactagagacaggcttgcaaaaatcaataaggat ttggcgtcagctgagcagaacaggagccataccgctgccgagctgcgtaagaaggagcag cagttaactgaagatgaagagaagttcttcaacgtttgtggcagtcaagatctggaacag gacctgggcaaactacaggaggatctggagaagatatcaaaacagagagccatgttagca ggagccacggccgtgtacactcagttcatcagtcagctgacggaggagagggagccctgc tgccccgtgtgccagcggacctttccctccgaatctgacctccaggaagtgatcagcgac atgcagtctaaactccgcctggtgccggacaaactgaaaaacacagagcaggacctgaaa aggaaggagaggaagaaagatgatatgatggctctcagacctgtaaggcagtccgtcgta catcttcgggaaaaggagttacccgagttgaggaaccgtctacagactgtgaacagagag attgagaggctgaaagctgatgtggaggagcaggaggctctgctggccactctgatgtct gaggaggaaacagccaaagcctgtctgcaggacatatctcttatggacagatacctgatg gaccttaaagaggtggagaggaaaatagctcagcaggcagctaaactccagggagttgac ctgacccgaaccatccagcaagtcagtcaagagaaacaagaaactcagcacaagctcgac accacttccagcaagatggagctgaaacgtaaactaattcaggaccagcaggaccagatc cagatgctgaaaagtgcggtgaatgagacgagggcggagaagctgcagctgagcagcgac atgcagaagcagcagcagctggaggagcagtgtgtggagttcaccacggagatccaggcc ctgaccagggacataagggaggccaaggagcagctggctcctctgtctgctgctctggag aagttgcagcaggagaaacaagagctgctggagcgcagaagacagaagcaggaagaaggg caggagaagatcaacgccatcaaagagagagtgaaggtgataaccacattagagcgagat atcactaaatacatcaatgaaggcaaagatgaatacaaagagcaaaaagagtctgagctt caagaaaccaacactcagctccatgaagctgagaaactgaaagagaagatcaataaggag attggcaacattcgtcaagacattgacactcaaaaggtccaggagcggtggttacttgac aatctgaccctgaggaagcgtgttgaggaactgaaggaggttgtggccaaacgtgaagct cttttgaaagacatgggcaacatgcaggtccatcagctccgccaagaacgtcgcgatctg gaacggaggttggaggatttgaaaaagaaccgcagcattgcactgggtcgccagaaaggg tttgaggaggagatcctgcactacagaaaagagctgcgagaagaccaatatgacaaagcg gatgagtgctacaaaaacaaaatgataacaatgaggaccacagagttggtcattaaagac ctggatctctactacaaggcccttgatcaaaccattatgaaattccacagcatgaagatg gatgagatcaataagattatcagagacctgtggcgcagcacctacaggggtcaagacatc gagtatgtggaaatcaggtccgatgtggacgagaacgcatctgctggagtcagacggagg gtttacaactaccgagtggttatggtgaaaggggacacgcatctggatatgagaggccgc tgcagtgccggacagaaggtgttggcctccctgatcatccgtctggctctggcagaaacg ttctgtctgaactgcgggatcctggcgctggacgagcccaccaccaacctggaccgggag aacatcgagtctctggcccacgccctcgtggaaatcatcaagagtcgctctcgccagcgt aacttccagctgctcgtcatcacccacgacgaggacttcgtggagcttttagggcgctcc agctacatcgagcatttctaccggatccgtaagaaccaggaccagaactctgaaatcacc aagtgcagcatcacttccctctctacctttctccattga

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