Cololabis saira (Pacific saury): 133460292
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Entry
133460292 CDS
T09849
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133460292
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133460292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
133460292
NCBI-ProteinID:
XP_061596889
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All DBs
Position
14:14869901..14878637
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AA seq
1042 aa
AA seq
DB search
MENLTPEQWREIMNKKMHFAPELLCAIQEGKTELLSGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNEDCMDALLQGVKFDFRQIHEALLVAVDTNQPRVVQRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSRFAPGVTPLTLACQKDLYEIVTMLTQKGHVIPYPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLSAFCLSRELRKLSQKEPEFKPQYL
SLEQICQEFAVELLGMCRNQSEVTTILNSCGDQSQDSLDEQAFEDGIPNLSRLRLAVNYN
QKQFVTHPICQQVLSSIWCGHLAGWRGSRTAWKLLVSVGIFLTMPLLCLVYWIAPKSKAG
KIIKIPVIKFLLHSASYLWFLITLLGESITMELYRDKFASREQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFTLRILIMLKAHLLCQEQTSGDECIYF
TQTVRDDWHQEDPQLISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFHFLFWTMFGVANQDYVDMPQFALAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYVLRGVFRRICCCCNCTSEQKYPPITSVSDXSSEKGSEESQLPYQQQV
IRALVQRYIDSARREFEEAKRKDIGNRITELSKAVSRIHTDVKAVQQLLSTDRSGVDDAL
TKDGSSVLGKYIIGAKNNFRGFNSYQDDKNATLKVTVHHGQEKADPELQREADTQPDTST
SQMEECGSEGAKQVKDCEVVNMEEGRANEEQRDEKEPERKESDQSEHDVSEEKQEVTEGT
SFNSDEEKVNTTQDEADKRREGERDAGSKVTENPMKMSDQSGVGEVGRETTDTKKTTIRF
KDIELEERKVEARWTKGRKLERSVAEKSPVGKNNEAPGNSKVIPSPTGSSSSQDTGFGSR
EGEQSIDENISTGTFSGFTTQT
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctcacgccggagcaatggcgcgagatcatgaacaagaagatgcacttcgct
ccggagctcctgtgcgccatccaggaagggaagacggagctgctgagtgggctgctgaag
acgggcgacggcatcatccgccagctggacgagtctgaagaccgccagtggagggaggcc
ctcaacctctccatccgcctgggcaacgaggactgcatggacgccctgctgcagggcgtc
aagttcgacttccggcagattcacgaggccctgctggtggctgtggacaccaaccagccc
cgggtggtgcagcgcctgctggaccgcctggaccaggagaaaggcaacaagatggacgtg
cgctccttctcccaggccatctttgaccgctccatcgacaactcgcggttcgctcccggt
gtaactcccttgacgttggcctgccagaaagacctgtacgaaatagtcaccatgctcacc
cagaagggccacgtcatcccatatccacacaagatatcctgcgcctgcctggagtgtcgc
aacggccgccagtacgacctgctgaagttctccctgtctcgcatcaatacgtaccgaggc
atcgccagccgggcctacctgtccatcacctccgacgacgccatgctcagcgcgttctgc
ctcagccgggagctccgcaagctgtcgcagaaggagccggagttcaagcctcagtacttg
agcctggagcagatttgccaggagttcgccgtggagctgctgggcatgtgtcgcaaccag
agcgaggtgactactatcctgaacagctgcggggaccagagccaggactccctggacgag
caggccttcgaggacgggatccccaacctgtcgcggctgaggctggccgtcaactacaac
cagaagcagttcgtaacgcacccgatctgccagcaagtcctgtcgtccatctggtgtgga
cacctggcaggttggcgaggcagcaggacggcttggaagctgttggtgtctgtgggaatc
tttctcaccatgccgctgctttgcctcgtctactggatcgcaccaaaatctaaggcagga
aagatcataaagatccctgtgatcaagttcctcctccactcagcgtcctacctctggttt
ctcatcactttgctcggagaatccatcaccatggagctgtatcgggacaagtttgcatcc
cgagagcagaacatcctgcacagctccttccacatggtgtgggtggtcggtttcttctgg
tacgagtgtaaggaggtgtggatcgagggcctgcggagctacttcctggactggtggaac
tgcttggacgtgatggtgctcagcatgtacctggcgtccttcacgctgcgcatactcatc
atgctcaaggcgcaccttctctgtcaggagcagaccagcggggacgagtgcatctacttc
acccagaccgtgcgtgacgactggcatcaggaagacccgcagctgatctcagaggtgctg
tttgccgtgaccagcatgctcagcttcacccggctggcctacatcctgccagcccacgag
tctctggggaccctgcagatctccatcgggaagatgatagacgacatgatgaggttcatg
tttatactgatgatcatcgggacagccttcctgtgtgggatcaacaacgtctatgtgccg
tacgtcatctctccacatctcggcaggttcaacgagaccttccacttcctgttctggacc
atgttcggcgtggcgaaccaggactacgtggacatgcctcagttcgcgctggcagagttt
gtgggacggatcctgtacggcatcttcacgctggtcatcgtcatcgtgctcctcaacatg
ctcatcgctatgatcaccaactccttccagaagatcgaggacgacgccgacgtggagtgg
aagtttgccaggtccaagctgtacctcagctacttcagagaaggcctcaccatgccggtg
cccttcaacatcatcccgtctcccaaagccgtgttttacgttttacggggtgttttcaga
cgcatctgctgctgctgcaactgcacatccgagcagaagtaccccccgatcacatcagtt
agtgactgatccagcgaaaagggatcagaggaaagccagttaccgtaccagcagcaggtg
atccgggccctggtgcagcgctacatcgattcagctcgcagggagttcgaagaggccaag
aggaaagatattggtaaccgcatcactgagctgagtaaagccgtgtccaggatacacacc
gatgtgaaagctgtccagcaactcctgtcgactgaccgttcgggggtagacgacgcgctg
accaaggatggctcgtctgtgctgggaaaatacatcatcggtgcaaagaataacttcaga
ggcttcaacagctatcaggacgacaaaaacgccacgcttaaggtgacggtgcaccacgga
caagaaaaggctgatccggagctgcagcgggaggcggatactcagccagacacaagcaca
tcacagatggaggaatgtggatctgaaggagcgaagcaggtaaaagactgtgaggtggtg
aacatggaggaagggcgagcaaacgaagagcagagggacgagaaggagccggagagaaaa
gagtcggaccaaagtgaacatgatgtcagtgaagagaaacaggaagtaacagaagggacc
agttttaatagtgatgaagaaaaggtgaacaccacccaggatgaagccgataaaagaagg
gaaggagaaagggatgcagggtcaaaggtgacagaaaaccccatgaagatgtctgaccaa
tcaggggtgggcgaagtcggccgtgaaacgacagacacaaagaaaactacgatcaggttc
aaagacatcgagctggaagaaaggaaggtggaggcgagatggacgaagggcagaaagtta
gagagaagtgtggcggagaagtctcccgtcggcaagaacaacgaagcgcctggaaacagc
aaagtgatcccgtctccaacggggagcagcagctcacaggacaccgggtttggttctcga
gagggggaacagtccatcgatgaaaacataagcaccgggacgttctctgggtttacaacc
caaacgtag
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