Cololabis saira (Pacific saury): 133460491
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Entry
133460491 CDS
T09849
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133460491 (zgc:91944)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
133460491 (zgc:91944)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
Motif
Other DBs
NCBI-GeneID:
133460491
NCBI-ProteinID:
XP_061597049
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Position
15:21054903..21087474
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AA seq
521 aa
AA seq
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MRQWCVPAATPRAAPTPERPCVSPPPPDPRMECCEMEPRYTIEQIDLLQRLRLSGMTKPQ
ILHALESLERLDPDHRSSHCDSRLALSGNAPAIAAPAPSSSSSSSSLSLASATTQTSGLD
GAALSPSNSYEASPPPLYSAGVAAQRSFSYDMMGEEEWDLEEKVEEYMRRDSNLVKEEIK
SFLNSRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNNPGLRCSE
SQHSVSPQPRARGGERDRTLTGASGSLPDILPNTNLNLSSSWSRQRELLLHLLPWCTAAA
AAQSGATLSMRSLVKEEPDWRMGIMAGDRAGMVAGPLRLRRGSRFTWRKECQSIMESFFM
ENQYPDEAKREEIANACNSVIQKPGCKLSEFERVTALKVYNWFANRRKEMKRRANIEAAI
LESHGIEVPSPSCHSNGEDGEMPEFTDQVNHRFSEQAWRGLSLAWRPRQAYTMEETSSQK
IMDHQDPSSLAAPEVSALPSPTSQVTEQKDEDSKREPADEE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagtggtgcgtccccgccgcgaccccgcgggcggccccgacccccgagcggccg
tgcgtgtcgccgcctccgccagatccaagaatggagtgctgtgagatggagccgcgctac
accatcgaacagatcgacctcctgcagcgccttcgcctctccggcatgactaaaccgcag
atcctccacgctctggagtccctggagaggctggacccggaccaccgctcctctcattgt
gactcccgcctggccctgtccggcaacgcccccgccatcgctgctccggcaccatcctcg
tcttcctcctcctcctcgctctcgctggcctctgccaccacgcagacctccggcctggac
ggcgctgcgctctcccccagcaacagctacgaggcctcgcctccgccgctctactccgcc
ggcgtggccgcgcagcgctccttcagctacgacatgatgggagaggaggagtgggacctg
gaggaaaaggtggaggagtacatgaggagagacagcaacctggtgaaagaagagatcaaa
agtttcctcaacagtcgcaggatctcgcaagcaattgtggggcaagtcacaggtatcagc
cagagctacatatcccagtggctgctgcaacaaggcctggaaatgagcgactccaagcgc
agagccttctaccgctggtacctgctggagaggaataacccagggttgaggtgcagtgaa
agccagcacagcgtgagtccccagcccagggccaggggaggggagagagacaggacgctc
acaggggcgagtggcagcctccccgacatcctccccaacaccaacctcaacctcagctca
tcgtggagcaggcagagagagctgctgctgcacttgctcccatggtgcactgctgccgca
gccgcccagtcaggtgccaccttatccatgcgttctctggtgaaagaggagccagactgg
aggatggggatcatggctggagaccgagctgggatggtggcgggtcctctgaggcttcgt
agaggaagcagattcacctggaggaaggagtgccaatccatcatggagagcttcttcatg
gagaatcagtacccagatgaggcaaagcgggaggagattgccaacgcctgcaactctgtc
atccagaagcccggctgcaaactgtcagagtttgagcgtgtgacggctctgaaggtgtac
aactggtttgccaaccgccggaaggagatgaagaggagagcgaatatagaggctgccatt
ttggaaagccatggtatcgaggtgccaagtccaagctgccactccaacggtgaggacgga
gagatgccagagttcacagaccaggtgaatcatcgattctcagagcaggcctggcgggga
ctctcgttggcctggcggccccgccaggcctatacaatggaagagacgtcctcccagaag
atcatggaccatcaggatccctcctcgctggctgctccagaggtgtcagccctgcccagc
cccacttctcaggtcacagaacaaaaggacgaggattcaaaaagggagcctgcagacgag
gagtga
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