Cololabis saira (Pacific saury): 133460502
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Entry
133460502 CDS
T09849
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133460502 (prdm1b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
133460502 (prdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-met
zf-C2HE
B129_C2H2-zf
Zap1_zf1
zf-C2H2_15
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
133460502
NCBI-ProteinID:
XP_061597069
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Position
15:complement(22321378..22332616)
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AA seq
660 aa
AA seq
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MKLESPPMDTSDWREADLALNCTYIVPDQVSEPGFSLPKAMTSVPRNLAFDYGSDNEVTG
VFSKEYIPLGTRFGPLQGDIYTKDNVPKQANRKYFWRIYNGGKLQHFIDGYDVHRSNWMR
YVNPARYPAEQNLVACQNGRDIYFYTTRAVEPRQELLVWYSREFAQRLCSQQDEPGHERI
EEEAVKVAPLFQTWLKDSEEKVTMEMLDRDTPPDTPDDQVMDFSRKVEKEDPDTERRDPG
LGLTPPYPPHQPGPHRNLPLHLHGVVPSYPLYPQSRPLQPSYQFLPSYGPPYSRLLVPPY
PAALSGVLSSRGSLRYGSYLGTDGLPYPPVGPPNLLPMPLPYAPATHGSLKELTPNVSPP
RGAPATPELSPAPKPDPQSNEASPLSCEEAVNLSVSAAGRGGPPPRNGPGHKALPYPLKK
QNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFQCNLCKKSFTQLAHLQKHHLVHTGE
KPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCSTKFTQYIHLKLHRRLHSGRERPH
RCPLCACAFFHGFSLRLHQRGCCPAGPAPSPAPFAEMLERFDASQEADALVDAAPASQVA
EAAERWLARTLEGEGKEDQKEATVLLRALTAAVPGNHAAYQDRASVVHLHARPVVKTEGQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggagagcccaccgatggacacgagcgactggagggaggccgacctggccctc
aactgcacctacatcgtcccggaccaggtgtcggagcccggcttcagcctgcccaaagcc
atgacctccgtcccccggaacctggccttcgactacggcagcgacaacgaggtgacaggt
gtgttcagcaaagaatacatccctctgggcacccgcttcgggcccctgcagggagacatc
tacaccaaagacaacgtccccaagcaggccaacagaaagtacttctggaggatttacaac
ggggggaagcttcagcacttcatcgatggctacgacgtccacaggagcaactggatgcgc
tatgtcaacccggcgcgctacccggccgagcagaacctggtggcctgccagaacggccgg
gacatctacttctacacgacccgggccgtggagccgcggcaggagctgctggtgtggtac
agccgcgagttcgcccagagactctgcagccagcaggacgagccaggccacgagcgaatc
gaggaggaggcggtgaaagtggcgccactttttcagacgtggctaaaggacagtgaggag
aaggtcaccatggagatgctggacagagacacaccccccgacacccccgacgaccaggtc
atggacttcagccggaaggtggagaaggaagacccggatacggagcggagggaccccggt
ctgggcctgacccccccgtaccccccccaccagccaggcccacacagaaacctgcccctc
cacctgcacggcgtggtcccctcctaccccctctacccccagtccagacccctccagccc
tcctaccagttcctcccctcctacggccccccctactcccgcctcctggtgcccccctac
cccgccgccctctcgggggtgctgtcctctcgggggtccctccggtacggcagctacctg
ggcaccgacggcctcccctacccccccgtcggccccccgaacctgctcccgatgcccctg
ccctacgctccggcgactcacgggagcctgaaggagctgacgcccaacgtctcgccaccc
aggggtgccccggccaccccggagctgtccccggccccgaagcccgacccccagtccaac
gaggcgtcgccgctcagctgcgaggaggccgtgaacctcagcgtgagcgccgccggcagg
ggcggccccccgccgcgcaacggccccggacacaaggcgctgccgtacccgctcaagaag
cagaacgggaagatcaagtacgagtgcaacgtctgctccaagaccttcggccagctgtcc
aacctcaaggtccacctccgagtgcacagcggcgagcggccgttccagtgcaacctgtgt
aagaagagcttcactcagctggcccacctgcagaagcaccacctggtccacacaggcgag
aagccgcacgagtgccaggtgtgccacaaacgcttcagcagcaccagcaacctgaagaca
cacctgcggctgcactcgggggagaagccgtaccagtgcaagctctgcagcaccaagttc
acccagtacatccacctcaagctgcaccggcgcctgcacagcggccgcgagcgcccgcac
cgctgcccgctctgcgcctgtgccttcttccacggcttctccctgcgcttgcaccagcgg
ggctgctgcccggccggccccgcccccagccccgcccccttcgccgagatgctggagcgc
ttcgacgccagccaggaggcggacgcgctggtggacgcagcgccggcctcccaggtggcc
gaggcggcagagcgctggctggcccggacgctggagggggaggggaaggaggaccagaag
gaggccacggtactgctcagggccctgacggcggcggtacctgggaaccacgcggcctat
caggacagagccagcgtggtgcacctccacgcacggcctgtggtgaaaacagaaggacag
tga
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