Cololabis saira (Pacific saury): 133460566
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Entry
133460566 CDS
T09849
Name
(RefSeq) general transcription factor IIF subunit 2-like isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133460566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133460566
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
133460566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
LYRM_2
Serglycin
Motif
Other DBs
NCBI-GeneID:
133460566
NCBI-ProteinID:
XP_061597191
LinkDB
All DBs
Position
2:complement(22591892..22600843)
Genome browser
AA seq
270 aa
AA seq
DB search
MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRICKKGNQGKAEVSFTL
NEELTVIEGLEDKTVSAPRDHPFTMQSVGGQTLAVFTESSAGQSEERSDGSNSGSGAGSG
PDKLALEGLVVQRAECRPAVSENYMKLKRLQIEESSKPIRLSQQLTKPVTSNYKPVANHD
NNREYERKKKEEGKRARADKQQVLDMLFSAFEKHQFYNIKDLVDITQQPVIYLKEILRDI
GIYNVKGTHKNTWELKPEYRHYQNEEKTDE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaggagaagtagatttgactggtgccaaacagaatacgggcgtctggctg
gttaaggtgccaaaatacctgtctcagcaatgggcaaaagcatctggcagaggcgaagtc
ggaaaactcagaatctgcaagaaaggaaaccaaggaaaagcagaggtgtccttcactttg
aatgaagaactgactgtgattgaaggtttagaagataagacggtatctgcacctcgtgac
catccgtttaccatgcagtcagttggaggccagacattagcggtcttcacagagagttca
gctggccaatcagaagaaagatctgatggcagcaactcaggttcgggggcggggtcaggt
ccagataaactagccttggagggactggtagtgcagagagcagagtgcagacctgcggtt
agtgaaaactatatgaaattgaagaggttacaaattgaggagtcctctaagccaatcaga
ctgtcacagcagttgacaaaacctgtcaccagcaattacaaacctgtagccaaccacgac
aacaatcgcgaatatgagaggaaaaagaaagaggagggcaagagagcaagagctgataaa
cagcaggtgttggacatgttgttttctgcttttgaaaagcaccagttctacaacatcaaa
gaccttgtggacatcactcaacagcctgtgatttacctgaaggaaatattgcgtgatatt
ggcatctacaatgtgaagggaacacacaagaacacctgggagctcaagccagagtacaga
cattaccaaaatgaggaaaagactgatgagtag
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