Cololabis saira (Pacific saury): 133460596
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Entry
133460596 CDS
T09849
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04020
Calcium signaling pathway
csai04080
Neuroactive ligand-receptor interaction
csai04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133460596
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133460596
04081 Hormone signaling
133460596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
csai04030
]
133460596
G protein-coupled receptors [BR:
csai04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
133460596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
7TM_GPCR_Srw
V1R
Motif
Other DBs
NCBI-GeneID:
133460596
NCBI-ProteinID:
XP_061597226
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Position
15:complement(29109028..29112725)
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AA seq
393 aa
AA seq
DB search
MENLTAAPGRNVTLGTWTDYSLQYKVVSTALLLVTCASGIVGNVMVILVVLTTRHMRTPT
NCYLVSLAAADLMVLTAAGVPAIADSLFATWVFGRYACAGITYCQYLGINASSCSITAFT
VERYIAICHPMRAQFLCTLARAKRIIAAVWACTSAYCVMWLYLSDLQQLRYDHGVTVVAC
GYRVPRRLYLPVYFVDFGVFFVVPLLLAAVLYGLIARILFLSALPSDPADPRRSRGDARH
GSSTAASRRQVTKMLAVVVVLFAVLWMPYRTLVVVNSFLDRAYLDAWFLLFCRTCVYLNS
AINPLIYNAMSQKFRAAFRRLICGCRRRRRGDAPAACSVALTYSAVKDSSLVESTDHFPT
ELEELAASEQLLADPQGASSDSCGFVKVDFSAA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctgacggcggctccggggcggaacgtcacgctggggacgtggacggactac
agcctgcagtacaaggtggtgagcaccgcgctgctgctcgtgacgtgcgcgtcgggcatc
gtggggaacgtgatggtgatcctggtggtgctcaccacgcgccacatgcgcacccccacc
aactgctacctggtgagcctggcggcggcagacctgatggtgctgacggccgcgggcgtg
cccgccatcgccgacagcctcttcgccacgtgggtgttcggccggtacgcgtgcgcgggc
atcacgtactgccagtacctgggcatcaacgcgtcctcctgctccatcaccgccttcacc
gtggagcgctacatcgccatctgccaccccatgcgcgcgcagttcctgtgcacgctggcg
cgcgccaagcgcatcatcgcggcggtgtgggcgtgcacgtccgcgtactgcgtcatgtgg
ctgtacctgtcggacctgcagcagctgcgctacgaccacggcgtgaccgtggtggcgtgc
ggctaccgggtgccgcgcaggctctacctgcccgtgtacttcgtggacttcggcgtgttc
ttcgtggttccgctgctgctggcggcggttctgtacggcctgatcgcgcgcatcctgttc
ctgagcgcgctcccgtccgaccccgcggacccgcggaggagccgcggggacgcgcgccac
ggcagctccacggccgcgtcgcgcagacaggtgaccaagatgctggcggtggtggtggtg
ctgttcgccgtgctctggatgccgtaccggacgctggtggtggtcaactccttcctggac
cgggcctacctggacgcctggttcctgctcttctgccgcacctgcgtctacctcaacagc
gccatcaacccgctcatctacaacgccatgtcgcagaagttccgggccgccttccgccgg
ttgatctgcggctgccggcggcgccggcgcggcgacgcacccgccgcctgcagcgtggcg
ctcacctacagcgccgtcaaggactcgtccctggtggagagcaccgaccacttccccacc
gagctggaggagctggccgcctcggagcagctgctggcggacccccagggcgcgtcctcg
gactcctgcgggttcgtgaaggtggacttcagtgctgcctga
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