Cololabis saira (Pacific saury): 133460618
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Entry
133460618 CDS
T09849
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
csai04148
Efferocytosis
csai04218
Cellular senescence
csai04310
Wnt signaling pathway
csai04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133460618 (nfatc1)
04310 Wnt signaling pathway
133460618 (nfatc1)
04020 Calcium signaling pathway
133460618 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133460618 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
133460618 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133460618 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133460618 (nfatc1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
133460618 (nfatc1)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
133460618
NCBI-ProteinID:
XP_061597271
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Position
15:complement(29976168..30037463)
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AA seq
835 aa
AA seq
DB search
MKSAEEDAYGFTPNVSLSLPLGGACLPSQFPGTGFYSPPGARPNGAPALESPRIEITAYG
QFPEDEAEESGAPPAGRLTSIVTLTLPGADGYRDPSCLSPASSVSSRSGLSDASYESGFS
CAYDYSPQGSPLQSPSVSPRGSSLAPPGGGSPRPSPSSSPRASVTDESWAGQRGSRPGSR
PGSPCGAKRKYTFNGGGAGAAPHRHFPYSPTPSPGPSPQTSPRLSVTEDSWLPNTNQYTN
SAILAAINALTTDGVGDLGDGVPTKARKTSAEHGAPVGLKVEPGGEEPGPGELGPDDPAG
RPLLKRESYGGGFLDVPQFCWPKPKQYLSSSLPALDWQLPATSNPYSLQIEVQPKSHHRA
HYETEGSRGAVKALAGGHPIVQLHGYMDSEPLTLQLFIGTADDRLLRPHAFYQVHRITGK
TVSTPSHEALHHNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGETDIGRKNTRV
RMVFRVHVNQSSSRTVSLQVASNPIECSQRSAQELPLVDKQSLDSSPASGGERMLLDGHN
FQPDSKVVFVEKAQDGHHLWETEAKVERDPSKPNFLLVEIPPYRNQRLSTPVHVNFYVCN
GKRKRSQYQRFTYVPASVPTIKTEPHDDYDAALVGVQHGPSLSLLPKPFYPPQGLTPLIS
DLRPCVVGGAYSIPPQRLSAKPPPLPSPGSPSSSPKLHDLSPSPFSKCPPAGPAAPPPGP
QSPIGHVSIIQETPGRYQPPIYPPGGSASPPASQTPTSSDAPFSPAHEMTPAPPATQQPP
KGPERPRPTAQEDGAPPALVVSIKQEPQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgcagaggaggatgcgtacggcttcacgcccaacgtcagcctgtccctcccg
ctgggcggcgcctgcctgccgtcccagttcccgggtaccgggttctactcgccccccggc
gcccggcccaacggcgccccggccctggagagcccccgcatcgagatcacggcgtacggc
cagttccccgaggacgaggcggaggagagcggcgccccgccggccgggcggctcacctcc
atcgtgacgctgacgctgcccggcgccgacggctaccgcgacccgagctgcctgagcccg
gctagcagcgtgtcgtcgcgcagcggcctctccgacgcctcctacgagtcgggcttctcc
tgcgcctacgactactcgccgcagggctcgccactgcagtcgccgtcggtgtcgccgcgt
ggctcctccctcgccccgccggggggcggctcccctcgcccgtccccctccagctcgccc
cgcgccagcgtgacggacgagtcctgggccgggcagcgcggctcccggcccgggtcccgg
cccgggtcgccctgcggcgccaagaggaagtacaccttcaacggcggcggcgcgggggcg
gcgccccacagacacttcccctactcccccaccccgtcccccgggccgtccccccagacg
tcgccccgcctcagcgtgacggaggacagctggctgcccaacaccaaccagtacaccaac
tccgccatcctggcggccatcaacgccctgaccaccgacggcgtgggcgacctgggcgat
ggcgtccccaccaaggcccgcaagaccagcgccgagcacggggcccccgtcggcctgaag
gtggagcccggtggcgaggagccgggccctggcgagctcggcccggacgacccggccggg
cggccgctgctcaagcgggagagctacggcggcgggttcctggacgtgccgcagttctgc
tggcccaagcccaagcagtacctcagctcgtccctccccgccctcgactggcagctgccc
gccacctccaacccctacagccttcagatcgaggtgcagcccaagtcccaccaccgggcc
cactacgagacggagggcagccgcggcgccgtcaaggcgctggccggaggacaccccatc
gtccagctgcacggctacatggacagcgagccgctgaccctgcagctgttcatcggcacg
gcggacgaccggctgctgcggccccacgccttctaccaggtccaccgcatcacggggaag
acggtgtccacgccgagtcacgaggcgctgcaccacaacaccaaggtgctggagatcccg
ctgctgccggagaacaacatgagggccataatcgactgcgcgggaatcctgaagcttcgc
aactccgacatcgagctgcggaagggcgagacggacatcggacgcaagaacacgcgggtg
cggatggttttccgggtccacgtcaaccagtccagcagccggacggtgtccctgcaggtg
gcgtccaaccccatcgagtgctcccagagatcggcccaggagctgccactggtggataag
cagagcctggactccagcccggcctccggcggcgagaggatgctgctggatggacacaac
ttccagcccgactccaaagtggtgttcgtggaaaaggctcaagatggtcaccacctctgg
gagacggaggccaaggtggagagagacccgtcgaagcccaatttcctgctggtggagatt
cctccgtacagaaaccagagactctccactccggtccacgtcaacttctacgtctgcaac
ggcaagaggaaaagaagccagtaccagcgcttcacctacgtcccggccagcgtcccgacg
ataaagacggagcctcacgacgactacgacgctgccctggtgggggtccagcacggcccg
agtctgtccctgctccccaaacccttctaccccccccagggcctgacccccctgatctcc
gacctgcggccgtgcgtggtgggcggggcctactccatccccccgcagagactgtcagcc
aagccccccccgctgccctcccccggatctcccagctccagcccgaagctgcacgacttg
tcgccgtcgcccttctccaagtgcccccccgccgggccggcggcccccccgccgggcccc
cagtcccccatcggccacgtctccatcatccaggagacccctggccgctaccagcccccc
atctacccccccggcggctccgcctccccgcccgcctcgcagacgcccacctcctccgac
gcccccttctctccggcccatgagatgacgccggcccccccggccacccagcagcccccc
aagggtccggagaggccccggcccaccgcccaggaggacggcgcccccccggcgctggtg
gtcagcatcaagcaggaaccgcaggaactggaccagatgtacctggatgacgtcaacgag
atcatcaggaacgacctgtcgagcatctccgtccacagccacgcatag
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