Cololabis saira (Pacific saury): 133460629
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Entry
133460629 CDS
T09849
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133460629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133460629
03016 Transfer RNA biogenesis [BR:
csai03016
]
133460629
03012 Translation factors [BR:
csai03012
]
133460629
04131 Membrane trafficking [BR:
csai04131
]
133460629
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133460629
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133460629
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133460629
Translation factors [BR:
csai03012
]
Eukaryotic type
Elongation factors
133460629
Membrane trafficking [BR:
csai04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
133460629
Exosome [BR:
csai04147
]
Exosomal proteins
Proteins found in most exosomes
133460629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
133460629
NCBI-ProteinID:
XP_061597288
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All DBs
Position
15:30546148..30557054
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETARYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASDKMTWFKGWKIERKEGGANGVTLLEALDSIMPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPPNLTTEVKSVEMHHESLT
EAVPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPLAADNFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVEKKALSGGKVTKSAQKADKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaatatcgtggtcattggtcacgtggactccggcaag
tccacgaccaccggccacctgatctacaagtgcggggggatcgataagagaaccatcgag
aagttcgagaaggaggcggccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggcagagcgtgagcgtggtatcaccatcgatatcgctctgtggaagttc
gagaccgccaggtactacgtgaccatcattgatgcccctggacacagggatttcatcaag
aacatgatcactggaacctctcaggctgactgcgccgtgttgatcgttgctgctggcgtc
ggtgagtttgaggccggtatctccaagaacggccagacccgtgagcacgccctgctggcc
tacaccctgggtgtgaagcagctcatcgtcggcgtcaacaagatggactccaccgagccc
ccttacagccagaagcgctttgaggagatccaaaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccaccgtggccttcgtccccatctctggatggcacggagacaac
atgctggaggccagtgacaagatgacctggttcaagggctggaagatcgagcgtaaagaa
ggcggagccaacggtgtcaccctcctggaggccctggactccatcatgccacccagccgt
cccaccgacaagcccctgcgtctgcccctgcaggacgtctacaaaatcggcggtatcgga
accgtacccgtcggccgtgttgagaccggtctcctgaagccaggcatggtcgtcaccttc
gctccccccaacctgaccactgaggtcaagtctgtggagatgcaccacgagtctctcacc
gaagccgtccccggcgacaacgtgggcttcaacattaagaacgtctccgtgaaggaaatc
cgtcgtggaaacgttgctggcgacagcaagaacgacccaccactggccgccgacaacttc
accgctcaggtgatcatcctgaaccaccccgggcagatctcccagggctacgcccccgtg
ctggactgccacaccgcccacatcgcctgcaagttcagcgaactcaaggagaagatcgac
cgccgctccggcaagaagctggaggacaaccccaaggcgctgaagtcgggcgacgccgcc
atcatcaccatggtgcccggaaagcccatgtgtgtggagagcttctcccagtaccccccc
ctgggtcgcttcgccgtgcgggacatgaggcagacggtggccgtcggcgtcatcaagagc
gtggagaagaaggcgctctccggcgggaaggtcaccaagtccgcacagaaggccgacaag
aagaaatga
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