KEGG   Cololabis saira (Pacific saury): 133460629
Entry
133460629         CDS       T09849                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133460629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133460629
   03016 Transfer RNA biogenesis [BR:csai03016]
    133460629
   03012 Translation factors [BR:csai03012]
    133460629
   04131 Membrane trafficking [BR:csai04131]
    133460629
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csai04147]
    133460629
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     133460629
Transfer RNA biogenesis [BR:csai03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    133460629
Translation factors [BR:csai03012]
 Eukaryotic type
  Elongation factors
   133460629
Membrane trafficking [BR:csai04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    133460629
Exosome [BR:csai04147]
 Exosomal proteins
  Proteins found in most exosomes
   133460629
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 Gtr1_RagA
Other DBs
NCBI-GeneID: 133460629
NCBI-ProteinID: XP_061597288
LinkDB
Position
15:30546148..30557054
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETARYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASDKMTWFKGWKIERKEGGANGVTLLEALDSIMPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVTFAPPNLTTEVKSVEMHHESLT
EAVPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPLAADNFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVEKKALSGGKVTKSAQKADKKK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaatatcgtggtcattggtcacgtggactccggcaag
tccacgaccaccggccacctgatctacaagtgcggggggatcgataagagaaccatcgag
aagttcgagaaggaggcggccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggcagagcgtgagcgtggtatcaccatcgatatcgctctgtggaagttc
gagaccgccaggtactacgtgaccatcattgatgcccctggacacagggatttcatcaag
aacatgatcactggaacctctcaggctgactgcgccgtgttgatcgttgctgctggcgtc
ggtgagtttgaggccggtatctccaagaacggccagacccgtgagcacgccctgctggcc
tacaccctgggtgtgaagcagctcatcgtcggcgtcaacaagatggactccaccgagccc
ccttacagccagaagcgctttgaggagatccaaaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccaccgtggccttcgtccccatctctggatggcacggagacaac
atgctggaggccagtgacaagatgacctggttcaagggctggaagatcgagcgtaaagaa
ggcggagccaacggtgtcaccctcctggaggccctggactccatcatgccacccagccgt
cccaccgacaagcccctgcgtctgcccctgcaggacgtctacaaaatcggcggtatcgga
accgtacccgtcggccgtgttgagaccggtctcctgaagccaggcatggtcgtcaccttc
gctccccccaacctgaccactgaggtcaagtctgtggagatgcaccacgagtctctcacc
gaagccgtccccggcgacaacgtgggcttcaacattaagaacgtctccgtgaaggaaatc
cgtcgtggaaacgttgctggcgacagcaagaacgacccaccactggccgccgacaacttc
accgctcaggtgatcatcctgaaccaccccgggcagatctcccagggctacgcccccgtg
ctggactgccacaccgcccacatcgcctgcaagttcagcgaactcaaggagaagatcgac
cgccgctccggcaagaagctggaggacaaccccaaggcgctgaagtcgggcgacgccgcc
atcatcaccatggtgcccggaaagcccatgtgtgtggagagcttctcccagtaccccccc
ctgggtcgcttcgccgtgcgggacatgaggcagacggtggccgtcggcgtcatcaagagc
gtggagaagaaggcgctctccggcgggaaggtcaccaagtccgcacagaaggccgacaag
aagaaatga

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