Cololabis saira (Pacific saury): 133460700
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Entry
133460700 CDS
T09849
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
csai04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133460700
04518 Integrin signaling
133460700
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133460700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133460700
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133460700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
Fibrinogen_C
EGF_Teneurin
fn3
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
hEGF
EGF
FN3_Tor_3rd
Pur_ac_phosph_N
DUF7949
EGF_integrin
Big_5
EGF_PEAR1L
IL3Ra_N
Motif
Other DBs
NCBI-GeneID:
133460700
NCBI-ProteinID:
XP_061597416
LinkDB
All DBs
Position
15:33302987..33380908
Genome browser
AA seq
2017 aa
AA seq
DB search
MLPRIPSLLVFLLLAGPALPSPASTELQVRGERTPRDAEKDSIKVVISEGCVTQGDSSDV
SQDGKEINLAPGSPLILTHKIKLVPSGSGSCGCEADFAALRERVERLEREVSELREKCGG
PEGSCCTSESKGAGCSIKTDECPNECSDQGRCENGKCVCFPGHSGPDCSESDCPDNCNDN
GRCVNGQCVCDPGFSGPDCSQKTCPDDCSDHGRCVNGKCVCDKGFKGPSCSEQSCPKDCS
KRGDCVNGQCVCNPGFTGSDCSKKACPNNCNKRGKCVNGKCVCFTGFTGPDCSEIACPDN
CNDRGRCVNGECECDSGFTGPDCSEIACPGNCNNKGRCINGQCVCDDGFTGHDCTEKTCP
DNCNNRGRCVNGQCVCDEGFTGADCSEKTCPDDCNNKGRCVDGRCECQRGFTGPDCSQCT
EGMTGPNCDTVMSGVSQLTTRDITETSVTLVWTPPAVQYDMYHITFTSQKDVEQQITVQV
EGSLASFTQTGLAAGQEYSVTIVGEINGRRGTESTAQFITLISGPTSLKVVKTTSTSAVV
QWEQSLGEIDRYRLTVTPNDGVGRSQKLTVAPGQNSAHIRQLEAGRLYDILLVAEKEMSQ
SQPATTQVVPGDSFPRVPTEDLTRRVTQTPAPGQDVGSMDQRLNPSSEVGVFDQLDGRQE
GSRADTEKVRGSDGADTDYSASVIARTKPQPRNGTRPQIPKKWPPLSKPRLPNRPRYNAT
RVLYRGRKVVPGSERGDDKTPSVMPENDSGTNNQPRPEEPTAAVGTKRQPDVGTAVHGND
TSSVTLKRTGILQNQEKKCVDKMKVTHMRLPLKDKGNGCRENGAGMGGTSGSDPNGTPPH
GETNQNDPLKSLLELITDTDNGNLTVISVHLSQPLNLSENAETVENVGLIERKPLSSGSS
SSSSLSTSQLSSHSSSESASLAISKLPSPQPSLISSPALSSPSSSPPYLSLPSSPSSSSS
SDELVSTGSNELDTDEDKTPPHSGKSPLPRRSGLPHLHHSAQKRPQIGRPHQNFRRLQNK
THPNISVPHHSPDSLSQTLQKETGLLSAEESSSSSSSSSSSSASDEFSPKFNADVKDTGR
VKDGRTSPESSGAEQNRKPLPTKRGQGPVHHTPLKGRYPSRIFLNRTRPHSKLLTRPSQP
VHTETDIQTEQVVPANLPNASSSLPKGSFPFNSVPVRTGIGGRDGMGNSSRLSTESIQTI
KRNGFLSSRHPNMSDSQTFRVKRPFQNRTYTNSRPPHQRGPYRVVPAGSRNNQAEKDTSP
ENRLPHRFQTSKVFGHNSTASRETYTERNEDNTPIQPDETTDPGVHGERGSTDGNIGATK
ETTSSVKSKVSPVTTPRKESPSRTITAGQQSTRKVGGDIGENVFETETGPAQETATEADS
SADSREPLDFVGVTNRTSDGFTLIWDTPEGKYQNFVVSREEIEKDKKPKQKNGKQDKDQH
SQVPSSESRGTEDDNSVAEDVVSEVPQVQSGTGAKPTDGNKTFTKVLPGSARSLQFEDLP
PQTEYTLTLLGMSPGLLSSLHKLVISTGPEPPTNIVFGKVTERSLTVSWTKPKSSVSGFK
VTYTHADEGEPVSVTVDSGDSNLDLSRLTPGSTYEVTIISTLGLDESDPIKDSVKTLPDP
PTDLRAANVTDTTALLIWRPALAAIDKYAIVYGSGTDSELRITVSGNAAEQQLSGLKEST
TYTVTITSRLGSQESEPATTSFTTTSGRDSAEPRDLQASNVTPRTAMLSWKPASKPAGSY
ILTYQTEGQAIKEVTVDGTVTQYNLTRLHPGSLYTVQLRSSGGEDVSTISTEFTTGTLRF
PFPTDCSQEYLNGIHVSGEVEIFPNGKLGPSMMVYCDMETDGGGWMVFQRRKDGSVDFFR
GWKDYLKGFGDLKGEFWLGLEKLQNLTGTTKMSLRVDLRDEGQSVFAKYSKFEVAKRNFR
LTVGGYSGTAGDSLTYHNDVVFSTRDRDPMSFITRCAISYRGGWWYKNCHEANLNGLYGI
DVKHQGMIWTSWKGKDHSVEFSEMKMRPAAFRPPARG
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atgcttccccgcatcccctccctcctcgtcttcctgctcctggctggcccagccctcccg
tctccagcctccacggagttacaggtcaggggtgagaggacgccaagggatgccgagaaa
gactccatcaaggtagtgatctcagagggatgtgtcactcagggagattcatctgatgtg
agccaagacggtaaagaaatcaacctggcacctggttctcctctgatcctgacccataag
atcaaactggttccatcggggtcggggtcttgtggctgcgaggccgactttgctgcgctg
cgggagcgcgtggagaggctggagagagaggtatccgaactgcgggagaagtgtggagga
cctgagggaagctgctgcacctcagagagcaaaggtgcaggatgctccatcaagacagac
gaatgtccgaacgagtgcagtgatcagggtcgctgtgagaacggcaagtgcgtctgcttc
cctggacacagcgggccggactgcagcgagtccgactgtccagacaactgcaacgacaac
gggaggtgcgtgaacggacagtgtgtgtgcgatccgggcttttctggtcccgactgctcc
cagaagacctgccccgacgactgcagcgaccacggcagatgtgtgaatggcaagtgtgtt
tgtgacaagggtttcaagggaccaagctgctcagaacagtcctgccccaaagactgcagc
aagagaggagactgtgtcaacggacagtgtgtctgcaatcccggatttacaggttcagat
tgctccaaaaaggcctgtcctaacaactgcaacaagcgtggcaaatgcgtgaacggtaaa
tgcgtctgcttcactggcttcaccggtccagactgctctgagatcgcctgtcctgacaac
tgtaacgaccgagggaggtgcgttaacggtgaatgtgaatgtgacagcggcttcactggt
ccagactgctcagaaatcgcctgtcctgggaactgcaacaacaaggggcgctgtattaac
ggacagtgtgtttgtgatgatggattcactggccacgattgcacagaaaaaacatgccct
gacaactgtaacaaccgtgggaggtgtgtcaatggacaatgtgtttgtgatgaaggattc
actggtgcagattgttccgaaaagacttgtcccgacgactgcaacaacaaaggacggtgt
gtcgatggcagatgtgaatgccagcgagggttcaccggaccagactgcagtcagtgtacg
gagggcatgacgggacccaactgtgataccgtcatgtcgggtgtctctcagctgaccact
cgagacatcactgagacgtctgtcactctggtttggactccacctgctgtccagtatgac
atgtaccacatcactttcaccagccagaaggacgtggagcagcagataaccgtgcaggtg
gagggaagcctggcctccttcacgcagacgggcctggcagcgggtcaggagtacagcgtc
accatcgttggggagatcaacggcaggaggggaactgagagcacggctcaatttatcacc
ctcatctctggtccaaccagcctcaaggttgtcaagacgacctccacgtcagcagtggtg
caatgggagcagtcgctgggggagattgacaggtaccgtttgaccgtcacacccaacgat
ggagtggggaggagtcaaaaactgaccgtagcacctggccaaaactctgcccacattcga
cagctggaggcagggcgtttgtatgacatcttactggtagcagagaaagagatgagccag
agccaaccagcaaccacccaggttgttcccggcgactcatttccgagggttcccacagag
gatttgacgaggcgggtcacacaaacacctgcacctggacaagatgttggcagcatggat
caaaggttgaatccatcgtctgaggttggagtgtttgaccagctggatggaaggcaggaa
gggagcagggctgatacagaaaaggtcagaggttctgatggtgctgacacggattactca
gccagtgtgatcgctagaaccaaaccacagccaagaaatggcactagaccccaaatccca
aagaaatggcctccgttatcaaagccaaggctcccaaatcgaccccgctacaatgcaact
cgagttctgtatagagggcgaaaggttgtccctgggtctgaaaggggggatgacaaaacc
ccgtctgtaatgcctgagaatgactcaggcacaaacaaccaacctagaccggaggaaccg
actgctgctgttggcacaaaaaggcaaccagatgttggcactgcagtccatggaaacgac
acaagttcagtcactttaaagcggactggaattcttcaaaaccaagagaagaaatgtgtg
gacaaaatgaaagtgacacacatgaggttacctctaaaggacaaaggcaatgggtgtaga
gaaaatggggcggggatgggaggaacctcaggctcagatccaaatggcacaccaccacat
ggtgaaacaaaccaaaacgatccactaaagagtttacttgaacttataacagatactgac
aatgggaatttgacagtgatttcagtccatctgtcccaaccactgaacctctcagaaaat
gcagaaactgtagagaatgtgggtttaatagagcggaagccgctttcttcaggttcctca
tcatcatcatccttgtcaacatcacagctgtcatcacattcatcgtcagagtcggcatca
ttagctatatcaaaactgccatcaccacaaccctctttaatttcctccccagccttatca
tcaccttcctcatcgccaccatatttgtcactcccatcatccccatcatcctcttccagc
tcagatgaattagtttctactgggagtaatgaacttgatactgatgaagataaaactccc
cctcattctggtaaatcccctctcccaagaagaagtggtttacctcatttgcaccactca
gctcaaaaacgtccacagataggtcgtccgcatcaaaactttagacggcttcagaacaaa
acccatccaaatataagcgttcctcatcactcccctgattctttaagccaaacactccaa
aaagagactggacttctgtctgcagaggaatcgtcatcatcttcatcatcttcatcatct
tcatctgcttcagatgaattctcacccaaatttaatgcagatgtaaaagatacaggtagg
gtcaaagatggaagaactagtcctgaatcatcaggagctgaacagaaccgaaaaccactg
ccgacaaaaagaggacaaggtcctgttcatcatacccctctaaaaggccgttaccccagt
cgcatctttttgaatcgaactcgtccacattcaaagcttctcacccgcccctcacaacct
gtacataccgaaacagatatacagacagagcaagtggttccagccaacttgccaaatgct
tcgtcttctttgcccaaaggttcctttccatttaatagtgtgccagtaagaacaggaatt
ggaggacgagatgggatggggaactcatcgagattgtcaactgagtctattcagaccata
aaacgaaatggatttctttcttcacgtcatccaaacatgagtgactcacaaacttttagg
gtaaagagaccttttcaaaacagaacatatactaactcgcgtccacctcatcaaagaggt
ccatatagagttgttcctgccggaagtcgaaataatcaggcggaaaaggacacttcccct
gaaaacaggcttcctcatagattccaaacttccaaggtgtttgggcacaactccactgcc
agcagagaaacttacacagaaagaaatgaagacaacactccgatacaaccagacgaaacc
acagatcctggcgtccacggagagagaggaagtactgacggaaatattggtgcaacaaaa
gaaactacctcctctgtcaaatcaaaagtgagtccagtcacaactccgaggaaagagtct
ccatcaagaaccattacagcagggcaacaaagtacccgtaaggtcggtggagacattgga
gaaaatgtttttgagactgaaactgggccggcacaagagactgcaacagaggctgactct
tctgcagactcaagagaacctttggactttgtaggagtaacaaaccggacctctgatgga
ttcaccctcatatgggacacaccagaagggaagtaccagaactttgttgtaagcagagaa
gaaattgaaaaagataaaaagccaaagcagaaaaacgggaaacaagacaaagatcaacac
agccaagtgccaagttctgaaagtagaggtactgaagatgataacagcgtagctgaagat
gttgttagtgaggtcccacaggtccagagtggcactggagccaaaccaacagatggtaac
aaaaccttcacaaaagttctccctggttcagctcgctccctgcagtttgaggatctgcct
ccacagaccgagtacactttgaccttgcttggaatgagtcctggcctcctatccagccta
cacaagcttgtcatcagtacaggccccgagcctccaaccaacatagtcttcggtaaggtg
acagaaaggtctctgactgtgtcatggactaaaccaaagagctctgttagcggttttaaa
gtcacctacacccatgctgatgagggtgaacccgtgtctgtgactgtggactcaggggac
tccaacctcgacctttctcggctcactccgggatccacttatgaggtcaccatcatctcc
accctcggactggatgagagcgatcccatcaaggacagcgtcaagacattgccagaccca
ccaacagacctgcgtgccgccaatgtcaccgacaccacagctttgttaatctggcgtcca
gcactggccgccattgacaaatacgccattgtctacggctcaggtacagattcagagttg
aggatcacagtgtctgggaatgcagctgagcagcagctcagcggtctgaaagaatctacc
acctacaccgtcaccataaccagccggctgggcagccaggagagtgaaccagccaccacc
agcttcaccaccaccagtgggcgcgatagtgcggaaccgcgtgatctccaggccagcaat
gtaactccacgcaccgctatgttgtcatggaaaccagcatcaaagcctgcagggagttac
atattgacctatcagaccgaaggtcaagcaataaaagaagtgactgtggacggcaccgtg
acccagtacaacctgaccaggcttcaccccggatccctgtacacggtgcagctaaggtca
agtggaggggaagacgtgtccaccatctccaccgagttcaccactggcacactaagattc
cctttccccaccgactgctctcaggagtatctgaatggaatccacgtgtcaggcgaggtg
gagatattccctaatgggaaattagggccatcgatgatggtttactgcgacatggagacg
gacggcggtggatggatggtcttccaaaggaggaaggatggctcagtagatttcttcaga
ggctggaaggattacctgaaaggctttggagacctgaaaggagagttctggctcggtctc
gagaaactccaaaacctgacaggcacgaccaagatgagtctacgcgtcgacctgcgtgac
gaaggccagtcagtgttcgctaagtattcaaaattcgaggtggccaaaaggaacttcaga
ttgactgtaggtggatacagcggcactgcaggtgactccctcacttatcacaacgacgta
gtcttttccaccagagaccgggacccgatgtccttcatcacccgctgtgccatttcgtac
cgaggaggctggtggtacaagaactgccacgaagcgaacctgaacggcctgtacggcatc
gatgtgaaacaccagggtatgatctggacctcgtggaagggaaaagaccactccgtcgag
ttctctgagatgaagatgaggccggcagccttcaggcctccggccagagggtga
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integrated database retrieval system